RNA–Protein interactions for RNA: ENST00000513946.1

PROM1-216, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-216ENST00000513946 DLGAP3O95886 979 aa6.12□□□□□ -1.43
PROM1-216ENST00000513946 ESRRAP11474 423 aaPredicted RBP6.12□□□□□ -1.43
PROM1-216ENST00000513946 C19orf57Q0VDD7 668 aa6.12□□□□□ -1.43
PROM1-216ENST00000513946 USPL1Q5W0Q7 1092 aa6.12□□□□□ -1.43
PROM1-216ENST00000513946 RETREG2Q8NC44 543 aa6.12□□□□□ -1.43
PROM1-216ENST00000513946 SLC7A3Q8WY07 619 aa6.12□□□□□ -1.43
PROM1-216ENST00000513946 ARID3AQ99856 593 aa6.12□□□□□ -1.43
PROM1-216ENST00000513946 CEP41Q9BYV8 373 aa6.12□□□□□ -1.43
PROM1-216ENST00000513946 SOX17Q9H6I2 414 aaPredicted RBP6.12□□□□□ -1.43
PROM1-216ENST00000513946 MED26O95402 600 aa6.11□□□□□ -1.43
PROM1-216ENST00000513946 IGLV1-40P01703 118 aa6.11□□□□□ -1.43
PROM1-216ENST00000513946 GRIA4P48058 902 aa6.11□□□□□ -1.43
PROM1-216ENST00000513946 NLRP12P59046 1061 aa6.11□□□□□ -1.43
PROM1-216ENST00000513946 IKBKEQ14164 716 aa6.11□□□□□ -1.43
PROM1-216ENST00000513946 ZNF423Q2M1K9 1284 aa6.11□□□□□ -1.43
PROM1-216ENST00000513946 UVSSAQ2YD98 709 aa6.11□□□□□ -1.43
PROM1-216ENST00000513946 KIAA0319Q5VV43 1072 aa6.11□□□□□ -1.43
PROM1-216ENST00000513946 B4GALNT3Q6L9W6 998 aa6.11□□□□□ -1.43
PROM1-216ENST00000513946 CCNJLQ8IV13 435 aa6.11□□□□□ -1.43
PROM1-216ENST00000513946 MYRFLQ96LU7 910 aa6.11□□□□□ -1.43
PROM1-216ENST00000513946 TMPRSS13Q9BYE2 586 aa6.11□□□□□ -1.43
PROM1-216ENST00000513946 NRSN2Q9GZP1 204 aa6.11□□□□□ -1.43
PROM1-216ENST00000513946 STOML1Q9UBI4 398 aa6.11□□□□□ -1.43
PROM1-216ENST00000513946 FAM177BA6PVY3 158 aa6.1□□□□□ -1.43
PROM1-216ENST00000513946 H3BRB1 525 aa6.1□□□□□ -1.43
PROM1-216ENST00000513946 DHX15O43143 795 aaKnown RBP6.1□□□□□ -1.43
PROM1-216ENST00000513946 PREPP48147 710 aa6.1□□□□□ -1.43
PROM1-216ENST00000513946 ARL4DP49703 201 aa6.1□□□□□ -1.43
PROM1-216ENST00000513946 SPRED3Q2MJR0 410 aa6.1□□□□□ -1.43
PROM1-216ENST00000513946 GLYCTKQ8IVS8 523 aa6.1□□□□□ -1.43
PROM1-216ENST00000513946 FAM20CQ8IXL6 584 aa6.1□□□□□ -1.43
PROM1-216ENST00000513946 ASAP3Q8TDY4 903 aa6.1□□□□□ -1.43
PROM1-216ENST00000513946 PSMG3-AS1Q96PY0 264 aa6.1□□□□□ -1.43
PROM1-216ENST00000513946 CITED4Q96RK1 184 aa6.1□□□□□ -1.43
PROM1-216ENST00000513946 FAM83CQ9BQN1 747 aa6.1□□□□□ -1.43
PROM1-216ENST00000513946 RUSC1Q9BVN2 902 aa6.1□□□□□ -1.43
PROM1-216ENST00000513946 RNF208Q9H0X6 261 aa6.1□□□□□ -1.43
PROM1-216ENST00000513946 TUT1Q9H6E5 874 aaKnown RBP6.1□□□□□ -1.43
PROM1-216ENST00000513946 BRPF3Q9ULD4 1205 aa6.1□□□□□ -1.43
PROM1-216ENST00000513946 A0A096LPE4 126 aa6.09□□□□□ -1.43
PROM1-216ENST00000513946 LOC100289279A0A1B0GTE1 492 aa6.09□□□□□ -1.43
PROM1-216ENST00000513946 A0A1W2PPZ6 126 aa6.09□□□□□ -1.43
PROM1-216ENST00000513946 HMX2A2RU54 273 aa6.09□□□□□ -1.43
PROM1-216ENST00000513946 ANKRD34AQ69YU3 496 aa6.09□□□□□ -1.43
PROM1-216ENST00000513946 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.09□□□□□ -1.43
PROM1-216ENST00000513946 ERICH6Q7L0X2 663 aa6.09□□□□□ -1.43
PROM1-216ENST00000513946 ZDHHC13Q8IUH4 622 aa6.09□□□□□ -1.43
PROM1-216ENST00000513946 CLEC10AQ8IUN9 316 aa6.09□□□□□ -1.43
PROM1-216ENST00000513946 TRIM42Q8IWZ5 723 aa6.09□□□□□ -1.43
PROM1-216ENST00000513946 SMG8Q8ND04 991 aaKnown RBP6.09□□□□□ -1.43
PROM1-216ENST00000513946 UTP4Q969X6 686 aaKnown RBP6.09□□□□□ -1.43
PROM1-216ENST00000513946 C7orf69Q9H7B7 122 aa6.09□□□□□ -1.43
PROM1-216ENST00000513946 PRR19A6NJB7 356 aa6.08□□□□□ -1.44
PROM1-216ENST00000513946 TIAF1O95411 115 aa6.08□□□□□ -1.44
PROM1-216ENST00000513946 BMP3P12645 472 aa6.08□□□□□ -1.44
PROM1-216ENST00000513946 ORC1Q13415 861 aa6.08□□□□□ -1.44
PROM1-216ENST00000513946 EXOSC6Q5RKV6 272 aaKnown RBP6.08□□□□□ -1.44
PROM1-216ENST00000513946 RNF43Q68DV7 783 aa6.08□□□□□ -1.44
PROM1-216ENST00000513946 KRTAP9-2Q9BYQ4 174 aa6.08□□□□□ -1.44
PROM1-216ENST00000513946 SUGCTQ9HAC7 445 aa6.08□□□□□ -1.44
PROM1-216ENST00000513946 TIMELESSQ9UNS1 1208 aa6.08□□□□□ -1.44
PROM1-216ENST00000513946 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.07□□□□□ -1.44
PROM1-216ENST00000513946 GPR182O15218 404 aa6.07□□□□□ -1.44
PROM1-216ENST00000513946 GSC2O15499 205 aa6.07□□□□□ -1.44
PROM1-216ENST00000513946 CTSBP07858 339 aa6.07□□□□□ -1.44
PROM1-216ENST00000513946 CD97P48960 835 aa6.07□□□□□ -1.44
PROM1-216ENST00000513946 NFIAQ12857 509 aa6.07□□□□□ -1.44
PROM1-216ENST00000513946 LIN7BQ9HAP6 207 aa6.07□□□□□ -1.44
PROM1-216ENST00000513946 CPNE3O75131 537 aaKnown RBP6.06□□□□□ -1.44
PROM1-216ENST00000513946 ITPKAP23677 461 aa6.06□□□□□ -1.44
PROM1-216ENST00000513946 PCDH1Q08174 1060 aa6.06□□□□□ -1.44
PROM1-216ENST00000513946 PDE3BQ13370 1112 aa6.06□□□□□ -1.44
PROM1-216ENST00000513946 NIF3L1Q9GZT8 377 aa6.06□□□□□ -1.44
PROM1-216ENST00000513946 CLEC4MQ9H2X3 399 aaPredicted RBP6.06□□□□□ -1.44
PROM1-216ENST00000513946 SART1O43290 800 aaKnown RBP6.05□□□□□ -1.44
PROM1-216ENST00000513946 NDUFB5O43674 189 aa6.05□□□□□ -1.44
PROM1-216ENST00000513946 TGFB1P01137 390 aa6.05□□□□□ -1.44
PROM1-216ENST00000513946 NEFLP07196 543 aa6.05□□□□□ -1.44
PROM1-216ENST00000513946 DRD2P14416 443 aa6.05□□□□□ -1.44
PROM1-216ENST00000513946 GSTM4Q03013 218 aa6.05□□□□□ -1.44
PROM1-216ENST00000513946 BEND4Q6ZU67 534 aa6.05□□□□□ -1.44
PROM1-216ENST00000513946 GLIS3Q8NEA6 775 aa6.05□□□□□ -1.44
PROM1-216ENST00000513946 CCDC74AQ96AQ1 378 aa6.05□□□□□ -1.44
PROM1-216ENST00000513946 RBCK1Q9BYM8 510 aa6.05□□□□□ -1.44
PROM1-216ENST00000513946 DNAJC25Q9H1X3 360 aa6.05□□□□□ -1.44
PROM1-216ENST00000513946 GNEQ9Y223 722 aaKnown RBP6.05□□□□□ -1.44
PROM1-216ENST00000513946 HIF3AQ9Y2N7 669 aa6.05□□□□□ -1.44
PROM1-216ENST00000513946 KRTAP9-6A0A140TA67 174 aa6.04□□□□□ -1.44
PROM1-216ENST00000513946 SOWAHDA6NJG2 315 aa6.04□□□□□ -1.44
PROM1-216ENST00000513946 KIAA1324LA8MWY0 1029 aaPredicted RBP6.04□□□□□ -1.44
PROM1-216ENST00000513946 EIF1AYO14602 144 aaKnown RBP6.04□□□□□ -1.44
PROM1-216ENST00000513946 SSTR4P31391 388 aa6.04□□□□□ -1.44
PROM1-216ENST00000513946 PDE4CQ08493 712 aa6.04□□□□□ -1.44
PROM1-216ENST00000513946 SGO2Q562F6 1265 aa6.04□□□□□ -1.44
PROM1-216ENST00000513946 NUTM2GQ5VZR2 741 aa6.04□□□□□ -1.44
PROM1-216ENST00000513946 CDPF1Q6NVV7 123 aa6.04□□□□□ -1.44
PROM1-216ENST00000513946 NBPF11Q86T75 865 aa6.04□□□□□ -1.44
PROM1-216ENST00000513946 SHISA5Q8N114 240 aa6.04□□□□□ -1.44
PROM1-216ENST00000513946 C12orf50Q8NA57 414 aaPredicted RBP6.04□□□□□ -1.44
PROM1-216ENST00000513946 CCER1Q8TC90 406 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms