RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 RNF19AQ9NV58 838 aa12.51□□□□□ -0.41
CHD1-205ENST00000508756 TMEM238LA0A1B0GVL6 79 aa12.5□□□□□ -0.41
CHD1-205ENST00000508756 DLL1O00548 723 aa12.5□□□□□ -0.41
CHD1-205ENST00000508756 TM4SF5O14894 197 aa12.5□□□□□ -0.41
CHD1-205ENST00000508756 PRPF40AO75400 957 aaKnown RBP12.5□□□□□ -0.41
CHD1-205ENST00000508756 SELPP16109 830 aa12.5□□□□□ -0.41
CHD1-205ENST00000508756 ERCC3P19447 782 aa12.5□□□□□ -0.41
CHD1-205ENST00000508756 CHRNA4P43681 627 aa12.5□□□□□ -0.41
CHD1-205ENST00000508756 IKBKEQ14164 716 aa12.5□□□□□ -0.41
CHD1-205ENST00000508756 MAP4K3Q8IVH8 894 aa12.5□□□□□ -0.41
CHD1-205ENST00000508756 APBA3O96018 575 aa12.49□□□□□ -0.41
CHD1-205ENST00000508756 ITGB2P05107 769 aa12.49□□□□□ -0.41
CHD1-205ENST00000508756 TAGLNQ01995 201 aaKnown RBP12.49□□□□□ -0.41
CHD1-205ENST00000508756 DUSP9Q99956 384 aaKnown RBP12.49□□□□□ -0.41
CHD1-205ENST00000508756 OSBPL7Q9BZF2 842 aa12.49□□□□□ -0.41
CHD1-205ENST00000508756 SOX1O00570 391 aaPredicted RBP12.48□□□□□ -0.41
CHD1-205ENST00000508756 ESRRAP11474 423 aaPredicted RBP12.48□□□□□ -0.41
CHD1-205ENST00000508756 ITPKAP23677 461 aa12.48□□□□□ -0.41
CHD1-205ENST00000508756 FCGRTP55899 365 aa12.48□□□□□ -0.41
CHD1-205ENST00000508756 PIP4K2BP78356 416 aa12.48□□□□□ -0.41
CHD1-205ENST00000508756 PLA2G4EQ3MJ16 856 aa12.48□□□□□ -0.41
CHD1-205ENST00000508756 CD163Q86VB7 1156 aa12.48□□□□□ -0.41
CHD1-205ENST00000508756 KLHDC7BQ96G42 594 aa12.48□□□□□ -0.41
CHD1-205ENST00000508756 CLEC4MQ9H2X3 399 aaPredicted RBP12.48□□□□□ -0.41
CHD1-205ENST00000508756 ZNF576Q9H609 170 aa12.48□□□□□ -0.41
CHD1-205ENST00000508756 SEC31BQ9NQW1 1179 aa12.48□□□□□ -0.41
CHD1-205ENST00000508756 C1QTNF9BB2RNN3 333 aa12.47□□□□□ -0.41
CHD1-205ENST00000508756 PCDH1Q08174 1060 aa12.47□□□□□ -0.41
CHD1-205ENST00000508756 FOXD4L6Q3SYB3 417 aaPredicted RBP12.47□□□□□ -0.41
CHD1-205ENST00000508756 FOXD4L3Q6VB84 417 aaPredicted RBP12.47□□□□□ -0.41
CHD1-205ENST00000508756 KCNK4Q9NYG8 393 aa12.47□□□□□ -0.41
CHD1-205ENST00000508756 DDX3YO15523 660 aaKnown RBP12.46□□□□□ -0.41
CHD1-205ENST00000508756 ZNF423Q2M1K9 1284 aa12.46□□□□□ -0.41
CHD1-205ENST00000508756 WNT8BQ93098 351 aa12.46□□□□□ -0.41
CHD1-205ENST00000508756 SPG7Q9UQ90 795 aa12.46□□□□□ -0.41
CHD1-205ENST00000508756 CD68P34810 354 aaPredicted RBP12.45□□□□□ -0.42
CHD1-205ENST00000508756 DTHD1Q6ZMT9 781 aa12.45□□□□□ -0.42
CHD1-205ENST00000508756 KLHL23Q8NBE8 558 aa12.45□□□□□ -0.42
CHD1-205ENST00000508756 NACC1Q96RE7 527 aa12.45□□□□□ -0.42
CHD1-205ENST00000508756 ADAM11O75078 769 aa12.44□□□□□ -0.42
CHD1-205ENST00000508756 GNA15P30679 374 aa12.44□□□□□ -0.42
CHD1-205ENST00000508756 C19orf57Q0VDD7 668 aa12.44□□□□□ -0.42
CHD1-205ENST00000508756 IGF2-ASQ6U949 168 aa12.44□□□□□ -0.42
CHD1-205ENST00000508756 LENG1Q96BZ8 264 aaPredicted RBP12.44□□□□□ -0.42
CHD1-205ENST00000508756 OSGEPQ9NPF4 335 aa12.44□□□□□ -0.42
CHD1-205ENST00000508756 PPP4R2Q9NY27 417 aa12.44□□□□□ -0.42
CHD1-205ENST00000508756 USP21Q9UK80 565 aa12.44□□□□□ -0.42
CHD1-205ENST00000508756 NLRP12P59046 1061 aa12.43□□□□□ -0.42
CHD1-205ENST00000508756 PTPN12Q05209 780 aaKnown RBP12.43□□□□□ -0.42
CHD1-205ENST00000508756 FOXD4L4Q8WXT5 416 aaPredicted RBP12.43□□□□□ -0.42
CHD1-205ENST00000508756 C12orf49Q9H741 205 aa12.43□□□□□ -0.42
CHD1-205ENST00000508756 C9orf172C9J069 976 aa12.42□□□□□ -0.42
CHD1-205ENST00000508756 WISP1O95388 367 aa12.42□□□□□ -0.42
CHD1-205ENST00000508756 ARL4DP49703 201 aa12.42□□□□□ -0.42
CHD1-205ENST00000508756 SUZ12Q15022 739 aaKnown RBP12.42□□□□□ -0.42
CHD1-205ENST00000508756 C3orf58Q8NDZ4 430 aa12.42□□□□□ -0.42
CHD1-205ENST00000508756 DCAF11Q8TEB1 546 aa12.42□□□□□ -0.42
CHD1-205ENST00000508756 BCL2L13Q9BXK5 485 aa12.42□□□□□ -0.42
CHD1-205ENST00000508756 PARP2Q9UGN5 583 aa12.42□□□□□ -0.42
CHD1-205ENST00000508756 GIPC1O14908 333 aa12.41□□□□□ -0.42
CHD1-205ENST00000508756 FGD1P98174 961 aa12.41□□□□□ -0.42
CHD1-205ENST00000508756 FAAP100Q0VG06 881 aa12.41□□□□□ -0.42
CHD1-205ENST00000508756 MBTPS1Q14703 1052 aa12.41□□□□□ -0.42
CHD1-205ENST00000508756 UBASH3BQ8TF42 649 aa12.41□□□□□ -0.42
CHD1-205ENST00000508756 FAM161BQ96MY7 647 aa12.41□□□□□ -0.42
CHD1-205ENST00000508756 AKAP2Q9Y2D5 859 aa12.41□□□□□ -0.42
CHD1-205ENST00000508756 B3GALT4O96024 378 aa12.4□□□□□ -0.42
CHD1-205ENST00000508756 GSTM4Q03013 218 aa12.4□□□□□ -0.42
CHD1-205ENST00000508756 GIPC2Q8TF65 315 aa12.4□□□□□ -0.42
CHD1-205ENST00000508756 SRCIN1Q9C0H9 1055 aa12.4□□□□□ -0.42
CHD1-205ENST00000508756 MRPL18Q9H0U6 180 aaKnown RBP12.4□□□□□ -0.42
CHD1-205ENST00000508756 SOX17Q9H6I2 414 aaPredicted RBP12.4□□□□□ -0.42
CHD1-205ENST00000508756 GSTT1P30711 240 aa12.39□□□□□ -0.43
CHD1-205ENST00000508756 ZNF157P51786 506 aaPredicted RBP12.39□□□□□ -0.43
CHD1-205ENST00000508756 ADGRE1Q14246 886 aa12.39□□□□□ -0.43
CHD1-205ENST00000508756 GPAT2Q6NUI2 795 aa12.39□□□□□ -0.43
CHD1-205ENST00000508756 FRMD6Q96NE9 622 aa12.39□□□□□ -0.43
CHD1-205ENST00000508756 USP17L7P0C7H9 530 aa12.38□□□□□ -0.43
CHD1-205ENST00000508756 XRCC5P13010 732 aaKnown RBP12.38□□□□□ -0.43
CHD1-205ENST00000508756 NRG1Q02297 640 aaPredicted RBP12.38□□□□□ -0.43
CHD1-205ENST00000508756 RPS26P11Q5JNZ5 115 aaPredicted RBP12.38□□□□□ -0.43
CHD1-205ENST00000508756 FAM8A1Q9UBU6 413 aa12.38□□□□□ -0.43
CHD1-205ENST00000508756 ALX3O95076 343 aa12.37□□□□□ -0.43
CHD1-205ENST00000508756 EIF4BP23588 611 aaKnown RBP12.37□□□□□ -0.43
CHD1-205ENST00000508756 PSMD2Q13200 908 aa12.37□□□□□ -0.43
CHD1-205ENST00000508756 DUOXA2Q1HG44 320 aa12.37□□□□□ -0.43
CHD1-205ENST00000508756 ACAD11Q709F0 780 aa12.37□□□□□ -0.43
CHD1-205ENST00000508756 AGGF1Q8N302 714 aaeCLIP12.37□□□□□ -0.43
CHD1-205ENST00000508756 USP26Q9BXU7 913 aa12.37□□□□□ -0.43
CHD1-205ENST00000508756 AK5Q9Y6K8 562 aa12.37□□□□□ -0.43
CHD1-205ENST00000508756 DAB2P98082 770 aa12.36□□□□□ -0.43
CHD1-205ENST00000508756 XPCQ01831 940 aaPredicted RBP12.36□□□□□ -0.43
CHD1-205ENST00000508756 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.36□□□□□ -0.43
CHD1-205ENST00000508756 GPN3Q9UHW5 284 aaPredicted RBP12.36□□□□□ -0.43
CHD1-205ENST00000508756 F8W735 103 aaPredicted RBP12.35□□□□□ -0.43
CHD1-205ENST00000508756 NOS3P29474 1203 aa12.35□□□□□ -0.43
CHD1-205ENST00000508756 KIAA1211Q6ZU35 1233 aa12.35□□□□□ -0.43
CHD1-205ENST00000508756 WFDC12Q8WWY7 111 aa12.35□□□□□ -0.43
CHD1-205ENST00000508756 SPOCK3Q9BQ16 436 aa12.35□□□□□ -0.43
CHD1-205ENST00000508756 TRIM56Q9BRZ2 755 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms