RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 PARD6BQ9BYG5 372 aa15.36■□□□□ 0.05
LETM1-203ENST00000505551 NWD1Q149M9 1564 aa15.35■□□□□ 0.05
LETM1-203ENST00000505551 CCDC151A5D8V7 595 aa15.35■□□□□ 0.05
LETM1-203ENST00000505551 IFIT2P09913 472 aaKnown RBP15.35■□□□□ 0.05
LETM1-203ENST00000505551 TMC6Q7Z403 805 aa15.35■□□□□ 0.05
LETM1-203ENST00000505551 PRAMEF22A3QJZ6 481 aa15.34■□□□□ 0.05
LETM1-203ENST00000505551 BTBD11A6QL63 1104 aa15.34■□□□□ 0.05
LETM1-203ENST00000505551 KIF1CO43896 1103 aaKnown RBP15.34■□□□□ 0.05
LETM1-203ENST00000505551 CSB-PGBD3P0DP91 1061 aa15.34■□□□□ 0.05
LETM1-203ENST00000505551 APOBRQ0VD83 1088 aa15.34■□□□□ 0.05
LETM1-203ENST00000505551 CCDC96Q2M329 555 aa15.34■□□□□ 0.05
LETM1-203ENST00000505551 LARP1Q6PKG0 1096 aaKnown RBP15.34■□□□□ 0.05
LETM1-203ENST00000505551 EFCAB13Q8IY85 973 aa15.34■□□□□ 0.05
LETM1-203ENST00000505551 SPG7Q9UQ90 795 aa15.34■□□□□ 0.05
LETM1-203ENST00000505551 MARF1Q9Y4F3 1742 aaKnown RBP15.34■□□□□ 0.05
LETM1-203ENST00000505551 VPS18Q9P253 973 aa15.34■□□□□ 0.05
LETM1-203ENST00000505551 C1orf167Q5SNV9 1468 aa15.34■□□□□ 0.05
LETM1-203ENST00000505551 MAP4K4O95819 1239 aaPredicted RBP15.33■□□□□ 0.05
LETM1-203ENST00000505551 MAP3K9P80192 1104 aa15.33■□□□□ 0.05
LETM1-203ENST00000505551 BRD3Q15059 726 aa15.33■□□□□ 0.05
LETM1-203ENST00000505551 PLEKHO1Q53GL0 409 aaPredicted RBP15.33■□□□□ 0.05
LETM1-203ENST00000505551 C1orf141Q5JVX7 400 aa15.33■□□□□ 0.05
LETM1-203ENST00000505551 MPHOSPH8Q99549 860 aa15.33■□□□□ 0.05
LETM1-203ENST00000505551 XPO4Q9C0E2 1151 aaKnown RBP15.33■□□□□ 0.05
LETM1-203ENST00000505551 RESTQ13127 1097 aa15.33■□□□□ 0.04
LETM1-203ENST00000505551 DNAJC21Q5F1R6 531 aaKnown RBP15.33■□□□□ 0.04
LETM1-203ENST00000505551 CALR3Q96L12 384 aaKnown RBP15.33■□□□□ 0.04
LETM1-203ENST00000505551 ZNF142P52746 1687 aaPredicted RBP15.33■□□□□ 0.04
LETM1-203ENST00000505551 MYH15Q9Y2K3 1946 aa15.32■□□□□ 0.04
LETM1-203ENST00000505551 SRGAP3O43295 1099 aa15.32■□□□□ 0.04
LETM1-203ENST00000505551 CNTROBQ8N137 903 aa15.32■□□□□ 0.04
LETM1-203ENST00000505551 NAT10Q9H0A0 1025 aaKnown RBP15.32■□□□□ 0.04
LETM1-203ENST00000505551 MED4Q9NPJ6 270 aa15.32■□□□□ 0.04
LETM1-203ENST00000505551 PPP2R3AQ06190 1150 aa15.32■□□□□ 0.04
LETM1-203ENST00000505551 PRPF40BQ6NWY9 871 aaKnown RBP15.32■□□□□ 0.04
LETM1-203ENST00000505551 CWC27Q6UX04 472 aaKnown RBP15.32■□□□□ 0.04
LETM1-203ENST00000505551 NUTM1Q86Y26 1132 aa15.32■□□□□ 0.04
LETM1-203ENST00000505551 HNRNPLLQ8WVV9 542 aaKnown RBP15.32■□□□□ 0.04
LETM1-203ENST00000505551 CHPF2Q9P2E5 772 aa15.32■□□□□ 0.04
LETM1-203ENST00000505551 MRFAP1Q9Y605 127 aa15.32■□□□□ 0.04
LETM1-203ENST00000505551 A0A087WWV3 80 aa15.31■□□□□ 0.04
LETM1-203ENST00000505551 PTH1RQ03431 593 aa15.31■□□□□ 0.04
LETM1-203ENST00000505551 NBPF10Q6P3W6 841 aaKnown RBP15.31■□□□□ 0.04
LETM1-203ENST00000505551 LRRC31Q6UY01 552 aa15.31■□□□□ 0.04
LETM1-203ENST00000505551 TADA2BQ86TJ2 420 aa15.31■□□□□ 0.04
LETM1-203ENST00000505551 FAM212AQ96EL1 285 aa15.31■□□□□ 0.04
LETM1-203ENST00000505551 PDE11AQ9HCR9 933 aa15.31■□□□□ 0.04
LETM1-203ENST00000505551 RAI14Q9P0K7 980 aa15.31■□□□□ 0.04
LETM1-203ENST00000505551 SOS1Q07889 1333 aaPredicted RBP15.31■□□□□ 0.04
LETM1-203ENST00000505551 SLC39A6Q13433 755 aa15.31■□□□□ 0.04
LETM1-203ENST00000505551 FCHSD1Q86WN1 690 aa15.31■□□□□ 0.04
LETM1-203ENST00000505551 IL1RAPL2Q9NP60 686 aa15.31■□□□□ 0.04
LETM1-203ENST00000505551 IFNKQ9P0W0 207 aa15.31■□□□□ 0.04
LETM1-203ENST00000505551 LTN1O94822 1766 aa15.31■□□□□ 0.04
LETM1-203ENST00000505551 NFAT5O94916 1531 aa15.31■□□□□ 0.04
LETM1-203ENST00000505551 N4BP2Q86UW6 1770 aaPredicted RBP15.31■□□□□ 0.04
LETM1-203ENST00000505551 TXLNAP40222 546 aa15.3■□□□□ 0.04
LETM1-203ENST00000505551 EIF4A1P60842 406 aaKnown RBP15.3■□□□□ 0.04
LETM1-203ENST00000505551 GNL2Q13823 731 aaKnown RBP15.3■□□□□ 0.04
LETM1-203ENST00000505551 ZRSR1Q15695 479 aaKnown RBP15.3■□□□□ 0.04
LETM1-203ENST00000505551 GOLGA1Q92805 767 aa15.3■□□□□ 0.04
LETM1-203ENST00000505551 BPIFA3Q9BQP9 254 aa15.3■□□□□ 0.04
LETM1-203ENST00000505551 GOLPH3LQ9H4A5 285 aa15.3■□□□□ 0.04
LETM1-203ENST00000505551 AKAP2Q9Y2D5 859 aa15.3■□□□□ 0.04
LETM1-203ENST00000505551 A0A087WUV0 522 aaPredicted RBP15.3■□□□□ 0.04
LETM1-203ENST00000505551 ATP6V1AP38606 617 aa15.3■□□□□ 0.04
LETM1-203ENST00000505551 CCAR1Q8IX12 1150 aaKnown RBP15.3■□□□□ 0.04
LETM1-203ENST00000505551 PIK3R5Q8WYR1 880 aa15.3■□□□□ 0.04
LETM1-203ENST00000505551 CFAP45Q9UL16 551 aa15.3■□□□□ 0.04
LETM1-203ENST00000505551 VWA3AA6NCI4 1184 aa15.3■□□□□ 0.04
LETM1-203ENST00000505551 NECTIN1Q15223 517 aa15.3■□□□□ 0.04
LETM1-203ENST00000505551 AKAP4Q5JQC9 854 aa15.3■□□□□ 0.04
LETM1-203ENST00000505551 ENGASEQ8NFI3 743 aa15.3■□□□□ 0.04
LETM1-203ENST00000505551 SUFUQ9UMX1 484 aa15.3■□□□□ 0.04
LETM1-203ENST00000505551 RNMTO43148 476 aaKnown RBP15.29■□□□□ 0.04
LETM1-203ENST00000505551 RAB11FIP3O75154 756 aa15.29■□□□□ 0.04
LETM1-203ENST00000505551 MAP2K2P36507 400 aa15.29■□□□□ 0.04
LETM1-203ENST00000505551 BEND6Q5SZJ8 279 aaPredicted RBP15.29■□□□□ 0.04
LETM1-203ENST00000505551 ANKRD20A12PQ8NF67 263 aa15.29■□□□□ 0.04
LETM1-203ENST00000505551 FAN1Q9Y2M0 1017 aa15.29■□□□□ 0.04
LETM1-203ENST00000505551 RGPD2P0DJD1 1756 aa15.29■□□□□ 0.04
LETM1-203ENST00000505551 CCDC196A0A1B0GTZ2 297 aa15.29■□□□□ 0.04
LETM1-203ENST00000505551 RINLQ6ZS11 566 aa15.29■□□□□ 0.04
LETM1-203ENST00000505551 HDXQ7Z353 690 aa15.29■□□□□ 0.04
LETM1-203ENST00000505551 ANKRD65E5RJM6 399 aa15.28■□□□□ 0.04
LETM1-203ENST00000505551 KINO60870 393 aaKnown RBP15.28■□□□□ 0.04
LETM1-203ENST00000505551 PPFIA4O75335 1185 aa15.28■□□□□ 0.04
LETM1-203ENST00000505551 POLD1P28340 1107 aa15.28■□□□□ 0.04
LETM1-203ENST00000505551 USP5P45974 858 aa15.28■□□□□ 0.04
LETM1-203ENST00000505551 CCDC73Q6ZRK6 1079 aa15.28■□□□□ 0.04
LETM1-203ENST00000505551 NBPF5PQ86XG9 351 aaPredicted RBP15.28■□□□□ 0.04
LETM1-203ENST00000505551 RUFY2Q8WXA3 655 aa15.28■□□□□ 0.04
LETM1-203ENST00000505551 ALDH8A1Q9H2A2 487 aaPredicted RBP15.28■□□□□ 0.04
LETM1-203ENST00000505551 EIF3JO75822 258 aaKnown RBP15.28■□□□□ 0.04
LETM1-203ENST00000505551 FAM160A1Q05DH4 1040 aa15.28■□□□□ 0.04
LETM1-203ENST00000505551 PROSER3Q2NL68 480 aa15.28■□□□□ 0.04
LETM1-203ENST00000505551 RPAINQ86UA6 219 aa15.28■□□□□ 0.04
LETM1-203ENST00000505551 RCOR1Q9UKL0 485 aa15.28■□□□□ 0.04
LETM1-203ENST00000505551 PI4KAP2A4QPH2 592 aa15.27■□□□□ 0.04
LETM1-203ENST00000505551 ZSCAN12O43309 604 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms