RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 TOM1L2Q6ZVM7 507 aa18.72■□□□□ 0.59
DDX41-205ENST00000505081 PDCL2Q8N4E4 241 aa18.72■□□□□ 0.59
DDX41-205ENST00000505081 FAM89AQ96GI7 184 aa18.72■□□□□ 0.59
DDX41-205ENST00000505081 CTIFO43310 598 aaKnown RBP18.71■□□□□ 0.59
DDX41-205ENST00000505081 PRC1O43663 620 aa18.71■□□□□ 0.59
DDX41-205ENST00000505081 CCDC57Q2TAC2 916 aa18.71■□□□□ 0.59
DDX41-205ENST00000505081 SARM1Q6SZW1 724 aa18.71■□□□□ 0.59
DDX41-205ENST00000505081 FMR1NBQ8N0W7 255 aaPredicted RBP18.71■□□□□ 0.59
DDX41-205ENST00000505081 SDF4Q9BRK5 362 aa18.71■□□□□ 0.59
DDX41-205ENST00000505081 HPS5Q9UPZ3 1129 aa18.71■□□□□ 0.59
DDX41-205ENST00000505081 GOLGA8BA8MQT2 603 aa18.7■□□□□ 0.58
DDX41-205ENST00000505081 CDC25BP30305 580 aa18.7■□□□□ 0.58
DDX41-205ENST00000505081 ANTXR2P58335 489 aa18.7■□□□□ 0.58
DDX41-205ENST00000505081 MRPS27Q92552 414 aaKnown RBP18.7■□□□□ 0.58
DDX41-205ENST00000505081 NWD2Q9ULI1 1742 aa18.7■□□□□ 0.58
DDX41-205ENST00000505081 CAVIN2O95810 425 aa18.7■□□□□ 0.58
DDX41-205ENST00000505081 U2AF2P26368 475 aaKnown RBP eCLIP18.7■□□□□ 0.582e-13■■□□□ 14.3
DDX41-205ENST00000505081 CCDC158Q5M9N0 1113 aa18.7■□□□□ 0.58
DDX41-205ENST00000505081 ANKRD7Q92527 254 aa18.7■□□□□ 0.58
DDX41-205ENST00000505081 ANO10Q9NW15 660 aa18.7■□□□□ 0.58
DDX41-205ENST00000505081 NUP188Q5SRE5 1749 aa18.7■□□□□ 0.58
DDX41-205ENST00000505081 KIF28PB7ZC32 967 aa18.7■□□□□ 0.58
DDX41-205ENST00000505081 BIN1O00499 593 aa18.7■□□□□ 0.58
DDX41-205ENST00000505081 CIAO1O76071 339 aa18.7■□□□□ 0.58
DDX41-205ENST00000505081 MRFAP1L1Q96HT8 127 aa18.7■□□□□ 0.58
DDX41-205ENST00000505081 C8orf76Q96K31 380 aa18.7■□□□□ 0.58
DDX41-205ENST00000505081 TRMT1Q9NXH9 659 aaKnown RBP18.7■□□□□ 0.58
DDX41-205ENST00000505081 TNS3Q68CZ2 1445 aa18.69■□□□□ 0.58
DDX41-205ENST00000505081 NCBP1Q09161 790 aaKnown RBP18.69■□□□□ 0.58
DDX41-205ENST00000505081 STK38Q15208 465 aa18.69■□□□□ 0.58
DDX41-205ENST00000505081 SF3A1Q15459 793 aaKnown RBP18.69■□□□□ 0.58
DDX41-205ENST00000505081 IMMTQ16891 758 aaKnown RBP18.69■□□□□ 0.58
DDX41-205ENST00000505081 LINC00301Q8NCQ3 95 aa18.69■□□□□ 0.58
DDX41-205ENST00000505081 ORC3Q9UBD5 711 aaPredicted RBP18.69■□□□□ 0.58
DDX41-205ENST00000505081 CCDC69A6NI79 296 aa18.69■□□□□ 0.58
DDX41-205ENST00000505081 SKILP12757 684 aa18.69■□□□□ 0.58
DDX41-205ENST00000505081 DPCR1Q3MIW9 517 aa18.69■□□□□ 0.58
DDX41-205ENST00000505081 AIFM3Q96NN9 605 aa18.69■□□□□ 0.58
DDX41-205ENST00000505081 RTEL1Q9NZ71 1219 aa18.69■□□□□ 0.58
DDX41-205ENST00000505081 RXRAP19793 462 aa18.68■□□□□ 0.58
DDX41-205ENST00000505081 MB21D2Q8IYB1 491 aaPredicted RBP18.68■□□□□ 0.58
DDX41-205ENST00000505081 SPATA31A3Q5VYP0 1347 aa18.68■□□□□ 0.58
DDX41-205ENST00000505081 CEP57L1Q8IYX8 460 aa18.68■□□□□ 0.58
DDX41-205ENST00000505081 PCDH11XQ9BZA7 1347 aa18.68■□□□□ 0.58
DDX41-205ENST00000505081 PCDH11YQ9BZA8 1340 aa18.68■□□□□ 0.58
DDX41-205ENST00000505081 SMTNL1A8MU46 457 aa18.67■□□□□ 0.58
DDX41-205ENST00000505081 TAF7LQ5H9L4 462 aa18.67■□□□□ 0.58
DDX41-205ENST00000505081 ADALQ6DHV7 355 aa18.67■□□□□ 0.58
DDX41-205ENST00000505081 ISM2Q6H9L7 571 aa18.67■□□□□ 0.58
DDX41-205ENST00000505081 KCPQ6ZWJ8 1503 aa18.67■□□□□ 0.58
DDX41-205ENST00000505081 PRDM11Q9NQV5 511 aa18.67■□□□□ 0.58
DDX41-205ENST00000505081 ATL3Q6DD88 541 aa18.67■□□□□ 0.58
DDX41-205ENST00000505081 ISCA1Q9BUE6 129 aa18.67■□□□□ 0.58
DDX41-205ENST00000505081 GPAA1O43292 621 aa18.67■□□□□ 0.58
DDX41-205ENST00000505081 EVCP57679 992 aa18.67■□□□□ 0.58
DDX41-205ENST00000505081 CCZ1BP86790 482 aa18.67■□□□□ 0.58
DDX41-205ENST00000505081 CCZ1P86791 482 aaPredicted RBP18.67■□□□□ 0.58
DDX41-205ENST00000505081 FBXO18Q8NFZ0 1043 aa18.67■□□□□ 0.58
DDX41-205ENST00000505081 NEDD4P46934 1319 aa18.66■□□□□ 0.58
DDX41-205ENST00000505081 TCIRG1Q13488 830 aa18.66■□□□□ 0.58
DDX41-205ENST00000505081 CEP135Q66GS9 1140 aa18.66■□□□□ 0.58
DDX41-205ENST00000505081 SMAP1Q8IYB5 467 aaPredicted RBP18.66■□□□□ 0.58
DDX41-205ENST00000505081 CTNNA3Q9UI47 895 aa18.66■□□□□ 0.58
DDX41-205ENST00000505081 PRDM4Q9UKN5 801 aa18.66■□□□□ 0.58
DDX41-205ENST00000505081 CPLX1O14810 134 aa18.66■□□□□ 0.58
DDX41-205ENST00000505081 MYSM1Q5VVJ2 828 aa18.66■□□□□ 0.58
DDX41-205ENST00000505081 NBPF11Q86T75 865 aa18.66■□□□□ 0.58
DDX41-205ENST00000505081 ATG3Q9NT62 314 aa18.66■□□□□ 0.58
DDX41-205ENST00000505081 ERVV-2B6SEH9 535 aa18.65■□□□□ 0.58
DDX41-205ENST00000505081 SPTLC2O15270 562 aa18.65■□□□□ 0.58
DDX41-205ENST00000505081 MARCKSP29966 332 aaPredicted RBP18.65■□□□□ 0.58
DDX41-205ENST00000505081 CCDC112Q8NEF3 446 aa18.65■□□□□ 0.58
DDX41-205ENST00000505081 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.65■□□□□ 0.58
DDX41-205ENST00000505081 ABCC6O95255 1503 aa18.65■□□□□ 0.58
DDX41-205ENST00000505081 GPTP24298 496 aa18.65■□□□□ 0.58
DDX41-205ENST00000505081 RALYLQ86SE5 291 aaKnown RBP18.65■□□□□ 0.58
DDX41-205ENST00000505081 APPBP2Q92624 585 aa18.65■□□□□ 0.58
DDX41-205ENST00000505081 NBPF3Q9H094 633 aa18.65■□□□□ 0.58
DDX41-205ENST00000505081 SENP2Q9HC62 589 aa18.65■□□□□ 0.58
DDX41-205ENST00000505081 KIAA1468Q9P260 1216 aa18.65■□□□□ 0.58
DDX41-205ENST00000505081 WDR17Q8IZU2 1322 aa18.64■□□□□ 0.58
DDX41-205ENST00000505081 ZNF213O14771 459 aa18.64■□□□□ 0.58
DDX41-205ENST00000505081 MCAMP43121 646 aa18.64■□□□□ 0.58
DDX41-205ENST00000505081 NCOA7Q8NI08 942 aa18.64■□□□□ 0.58
DDX41-205ENST00000505081 STRN4Q9NRL3 753 aa18.64■□□□□ 0.58
DDX41-205ENST00000505081 SYTL4Q96C24 671 aaPredicted RBP18.64■□□□□ 0.57
DDX41-205ENST00000505081 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.64■□□□□ 0.57
DDX41-205ENST00000505081 V9GYY5 206 aaPredicted RBP18.64■□□□□ 0.57
DDX41-205ENST00000505081 RBM6P78332 1123 aaKnown RBP18.63■□□□□ 0.57
DDX41-205ENST00000505081 INCENPQ9NQS7 918 aa18.63■□□□□ 0.57
DDX41-205ENST00000505081 AKAP2Q9Y2D5 859 aa18.63■□□□□ 0.57
DDX41-205ENST00000505081 A0A1W2PQ27 194 aa18.63■□□□□ 0.57
DDX41-205ENST00000505081 A0A1W2PQ64 194 aa18.63■□□□□ 0.57
DDX41-205ENST00000505081 A0A1W2PQD8 194 aa18.63■□□□□ 0.57
DDX41-205ENST00000505081 WDHD1O75717 1129 aaPredicted RBP18.63■□□□□ 0.57
DDX41-205ENST00000505081 IFIT5Q13325 482 aaKnown RBP18.63■□□□□ 0.57
DDX41-205ENST00000505081 DNAJC10Q8IXB1 793 aa18.63■□□□□ 0.57
DDX41-205ENST00000505081 FBXL16Q8N461 479 aa18.63■□□□□ 0.57
DDX41-205ENST00000505081 MROH7-TTC4A0A0A0MT08 1334 aa18.63■□□□□ 0.57
DDX41-205ENST00000505081 ZNF202O95125 648 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms