RNA–Protein interactions for RNA: ENST00000504047.1

ATXN3-208, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 426 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-208ENST00000504047 DLL1O00548 723 aa5.49□□□□□ -1.53
ATXN3-208ENST00000504047 SELPP16109 830 aa5.49□□□□□ -1.53
ATXN3-208ENST00000504047 C19orf57Q0VDD7 668 aa5.49□□□□□ -1.53
ATXN3-208ENST00000504047 COL19A1Q14993 1142 aa5.49□□□□□ -1.53
ATXN3-208ENST00000504047 SUZ12Q15022 739 aaKnown RBP5.49□□□□□ -1.53
ATXN3-208ENST00000504047 SHISA2Q6UWI4 295 aa5.49□□□□□ -1.53
ATXN3-208ENST00000504047 ADAMTSL4Q6UY14 1074 aa5.49□□□□□ -1.53
ATXN3-208ENST00000504047 DDX54Q8TDD1 881 aaKnown RBP5.49□□□□□ -1.53
ATXN3-208ENST00000504047 EPS8L3Q8TE67 593 aaKnown RBP5.49□□□□□ -1.53
ATXN3-208ENST00000504047 TCF12Q99081 682 aa5.49□□□□□ -1.53
ATXN3-208ENST00000504047 CARD10Q9BWT7 1032 aa5.49□□□□□ -1.53
ATXN3-208ENST00000504047 CLEC4MQ9H2X3 399 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-208ENST00000504047 METTL12A8MUP2 240 aa5.48□□□□□ -1.53
ATXN3-208ENST00000504047 GRIA4P48058 902 aa5.48□□□□□ -1.53
ATXN3-208ENST00000504047 PTPN12Q05209 780 aaKnown RBP5.48□□□□□ -1.53
ATXN3-208ENST00000504047 ADGRE1Q14246 886 aa5.48□□□□□ -1.53
ATXN3-208ENST00000504047 GRM2Q14416 872 aa5.48□□□□□ -1.53
ATXN3-208ENST00000504047 EAPPQ56P03 285 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-208ENST00000504047 PRPF40BQ6NWY9 871 aaKnown RBP5.48□□□□□ -1.53
ATXN3-208ENST00000504047 VN1R5Q7Z5H4 357 aa5.48□□□□□ -1.53
ATXN3-208ENST00000504047 TXNRD3Q86VQ6 643 aa5.48□□□□□ -1.53
ATXN3-208ENST00000504047 GALNT11Q8NCW6 608 aa5.48□□□□□ -1.53
ATXN3-208ENST00000504047 SPOCK3Q9BQ16 436 aa5.48□□□□□ -1.53
ATXN3-208ENST00000504047 SRCIN1Q9C0H9 1055 aa5.48□□□□□ -1.53
ATXN3-208ENST00000504047 SOX17Q9H6I2 414 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-208ENST00000504047 SPG7Q9UQ90 795 aa5.48□□□□□ -1.53
ATXN3-208ENST00000504047 TMEM238LA0A1B0GVL6 79 aa5.47□□□□□ -1.53
ATXN3-208ENST00000504047 SOX1O00570 391 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-208ENST00000504047 GIPC1O14908 333 aa5.47□□□□□ -1.53
ATXN3-208ENST00000504047 LDHBP07195 334 aaKnown RBP5.47□□□□□ -1.53
ATXN3-208ENST00000504047 P4HBP07237 508 aaKnown RBP5.47□□□□□ -1.53
ATXN3-208ENST00000504047 XRCC5P13010 732 aaKnown RBP5.47□□□□□ -1.53
ATXN3-208ENST00000504047 ITPKAP23677 461 aa5.47□□□□□ -1.53
ATXN3-208ENST00000504047 PCDH1Q08174 1060 aa5.47□□□□□ -1.53
ATXN3-208ENST00000504047 MBTPS1Q14703 1052 aa5.47□□□□□ -1.53
ATXN3-208ENST00000504047 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.47□□□□□ -1.53
ATXN3-208ENST00000504047 DTHD1Q6ZMT9 781 aa5.47□□□□□ -1.53
ATXN3-208ENST00000504047 KLHDC7BQ96G42 594 aa5.47□□□□□ -1.53
ATXN3-208ENST00000504047 FRMD6Q96NE9 622 aa5.47□□□□□ -1.53
ATXN3-208ENST00000504047 BCO2Q9BYV7 579 aa5.47□□□□□ -1.53
ATXN3-208ENST00000504047 AKTIPQ9H8T0 292 aa5.47□□□□□ -1.53
ATXN3-208ENST00000504047 ABCB6Q9NP58 842 aa5.47□□□□□ -1.53
ATXN3-208ENST00000504047 ITGB2P05107 769 aa5.46□□□□□ -1.54
ATXN3-208ENST00000504047 ESRRAP11474 423 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-208ENST00000504047 FCGRTP55899 365 aa5.46□□□□□ -1.54
ATXN3-208ENST00000504047 GSTM4Q03013 218 aa5.46□□□□□ -1.54
ATXN3-208ENST00000504047 DUOXA2Q1HG44 320 aa5.46□□□□□ -1.54
ATXN3-208ENST00000504047 SPRED3Q2MJR0 410 aa5.46□□□□□ -1.54
ATXN3-208ENST00000504047 FOXD4L6Q3SYB3 417 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-208ENST00000504047 TMCO4Q5TGY1 634 aa5.46□□□□□ -1.54
ATXN3-208ENST00000504047 PI16Q6UXB8 463 aa5.46□□□□□ -1.54
ATXN3-208ENST00000504047 FOXD4L3Q6VB84 417 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-208ENST00000504047 ACAD11Q709F0 780 aa5.46□□□□□ -1.54
ATXN3-208ENST00000504047 TMEM130Q8N3G9 435 aa5.46□□□□□ -1.54
ATXN3-208ENST00000504047 ZNF576Q9H609 170 aa5.46□□□□□ -1.54
ATXN3-208ENST00000504047 F8W735 103 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-208ENST00000504047 PRPF40AO75400 957 aaKnown RBP5.45□□□□□ -1.54
ATXN3-208ENST00000504047 PROCP04070 461 aa5.45□□□□□ -1.54
ATXN3-208ENST00000504047 CYP11A1P05108 521 aa5.45□□□□□ -1.54
ATXN3-208ENST00000504047 IREB2P48200 963 aaKnown RBP5.45□□□□□ -1.54
ATXN3-208ENST00000504047 NLRP12P59046 1061 aa5.45□□□□□ -1.54
ATXN3-208ENST00000504047 RPS26P11Q5JNZ5 115 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-208ENST00000504047 HP1BP3Q5SSJ5 553 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-208ENST00000504047 DNAJC14Q6Y2X3 702 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-208ENST00000504047 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.45□□□□□ -1.54
ATXN3-208ENST00000504047 WFDC12Q8WWY7 111 aa5.45□□□□□ -1.54
ATXN3-208ENST00000504047 B3GALT4O96024 378 aa5.44□□□□□ -1.54
ATXN3-208ENST00000504047 GSTT1P30711 240 aa5.44□□□□□ -1.54
ATXN3-208ENST00000504047 ITGAEP38570 1179 aa5.44□□□□□ -1.54
ATXN3-208ENST00000504047 NXPE4Q6UWF7 544 aa5.44□□□□□ -1.54
ATXN3-208ENST00000504047 GLIS3Q8NEA6 775 aa5.44□□□□□ -1.54
ATXN3-208ENST00000504047 USP26Q9BXU7 913 aa5.44□□□□□ -1.54
ATXN3-208ENST00000504047 CEP41Q9BYV8 373 aa5.44□□□□□ -1.54
ATXN3-208ENST00000504047 BCL11AQ9H165 835 aa5.44□□□□□ -1.54
ATXN3-208ENST00000504047 WWC3Q9ULE0 1092 aa5.44□□□□□ -1.54
ATXN3-208ENST00000504047 AKAP2Q9Y2D5 859 aa5.44□□□□□ -1.54
ATXN3-208ENST00000504047 DDX3YO15523 660 aaKnown RBP5.43□□□□□ -1.54
ATXN3-208ENST00000504047 GLB1P16278 677 aa5.43□□□□□ -1.54
ATXN3-208ENST00000504047 NOS3P29474 1203 aa5.43□□□□□ -1.54
ATXN3-208ENST00000504047 HNRNPUQ00839 825 aaKnown RBP eCLIP5.43□□□□□ -1.54
ATXN3-208ENST00000504047 PPP2R3AQ06190 1150 aa5.43□□□□□ -1.54
ATXN3-208ENST00000504047 ZNF423Q2M1K9 1284 aa5.43□□□□□ -1.54
ATXN3-208ENST00000504047 NPAS4Q8IUM7 802 aa5.43□□□□□ -1.54
ATXN3-208ENST00000504047 FOXD4L4Q8WXT5 416 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-208ENST00000504047 SETDB2Q96T68 719 aa5.43□□□□□ -1.54
ATXN3-208ENST00000504047 CORO1BQ9BR76 489 aa5.43□□□□□ -1.54
ATXN3-208ENST00000504047 RNF208Q9H0X6 261 aa5.43□□□□□ -1.54
ATXN3-208ENST00000504047 C12orf49Q9H741 205 aa5.43□□□□□ -1.54
ATXN3-208ENST00000504047 KCNK4Q9NYG8 393 aa5.43□□□□□ -1.54
ATXN3-208ENST00000504047 FAM8A1Q9UBU6 413 aa5.43□□□□□ -1.54
ATXN3-208ENST00000504047 GPN3Q9UHW5 284 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-208ENST00000504047 TM4SF5O14894 197 aa5.42□□□□□ -1.54
ATXN3-208ENST00000504047 ADAM11O75078 769 aa5.42□□□□□ -1.54
ATXN3-208ENST00000504047 ALX3O95076 343 aa5.42□□□□□ -1.54
ATXN3-208ENST00000504047 WISP1O95388 367 aa5.42□□□□□ -1.54
ATXN3-208ENST00000504047 EIF4BP23588 611 aaKnown RBP5.42□□□□□ -1.54
ATXN3-208ENST00000504047 GNA15P30679 374 aa5.42□□□□□ -1.54
ATXN3-208ENST00000504047 XPCQ01831 940 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-208ENST00000504047 AP3B2Q13367 1082 aa5.42□□□□□ -1.54
ATXN3-208ENST00000504047 DOC2BQ14184 412 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms