RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 KIAA1211Q6ZU35 1233 aa8.37□□□□□ -1.07
GGPS1-208ENST00000497327 ACAD11Q709F0 780 aa8.37□□□□□ -1.07
GGPS1-208ENST00000497327 NBPF11Q86T75 865 aa8.37□□□□□ -1.07
GGPS1-208ENST00000497327 GTF3C2Q8WUA4 911 aaPredicted RBP8.37□□□□□ -1.07
GGPS1-208ENST00000497327 SYNJ2O15056 1496 aa8.37□□□□□ -1.07
GGPS1-208ENST00000497327 GRIN2AQ12879 1464 aa8.37□□□□□ -1.07
GGPS1-208ENST00000497327 ARHGAP35Q9NRY4 1499 aa8.37□□□□□ -1.07
GGPS1-208ENST00000497327 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.36□□□□□ -1.07
GGPS1-208ENST00000497327 DDX3YO15523 660 aaKnown RBP8.36□□□□□ -1.07
GGPS1-208ENST00000497327 RPLP1P05386 114 aaKnown RBP8.36□□□□□ -1.07
GGPS1-208ENST00000497327 CCDC82Q8N4S0 544 aa8.36□□□□□ -1.07
GGPS1-208ENST00000497327 KLHL23Q8NBE8 558 aa8.36□□□□□ -1.07
GGPS1-208ENST00000497327 HHIPQ96QV1 700 aa8.36□□□□□ -1.07
GGPS1-208ENST00000497327 DZANK1Q9NVP4 752 aa8.36□□□□□ -1.07
GGPS1-208ENST00000497327 ARAP1Q96P48 1450 aa8.36□□□□□ -1.07
GGPS1-208ENST00000497327 NPR3P17342 541 aa8.35□□□□□ -1.07
GGPS1-208ENST00000497327 MZF1P28698 734 aaPredicted RBP8.35□□□□□ -1.07
GGPS1-208ENST00000497327 MTMR3Q13615 1198 aa8.35□□□□□ -1.07
GGPS1-208ENST00000497327 SLC51AQ86UW1 340 aa8.35□□□□□ -1.07
GGPS1-208ENST00000497327 UBASH3BQ8TF42 649 aa8.35□□□□□ -1.07
GGPS1-208ENST00000497327 KLHDC7BQ96G42 594 aa8.35□□□□□ -1.07
GGPS1-208ENST00000497327 C1orf115Q9H7X2 142 aa8.35□□□□□ -1.07
GGPS1-208ENST00000497327 RAXQ9Y2V3 346 aa8.35□□□□□ -1.07
GGPS1-208ENST00000497327 H3BRJ5 948 aa8.34□□□□□ -1.07
GGPS1-208ENST00000497327 TRPA1O75762 1119 aa8.34□□□□□ -1.07
GGPS1-208ENST00000497327 CES1P23141 567 aa8.34□□□□□ -1.07
GGPS1-208ENST00000497327 PHLDB3Q6NSJ2 640 aa8.34□□□□□ -1.07
GGPS1-208ENST00000497327 FAM46AQ96IP4 442 aaKnown RBP8.34□□□□□ -1.07
GGPS1-208ENST00000497327 SEC31BQ9NQW1 1179 aa8.34□□□□□ -1.07
GGPS1-208ENST00000497327 NUP160Q12769 1436 aa8.34□□□□□ -1.07
GGPS1-208ENST00000497327 VPS8Q8N3P4 1428 aa8.34□□□□□ -1.07
GGPS1-208ENST00000497327 KIAA0586Q9BVV6 1533 aa8.34□□□□□ -1.08
GGPS1-208ENST00000497327 RANGAP1P46060 587 aaPredicted RBP8.33□□□□□ -1.08
GGPS1-208ENST00000497327 FAM117BQ6P1L5 589 aa8.33□□□□□ -1.08
GGPS1-208ENST00000497327 SOX13Q9UN79 622 aa8.33□□□□□ -1.08
GGPS1-208ENST00000497327 POLIQ9UNA4 740 aa8.33□□□□□ -1.08
GGPS1-208ENST00000497327 KRTAP9-6A0A140TA67 174 aa8.32□□□□□ -1.08
GGPS1-208ENST00000497327 PDE2AO00408 941 aaPredicted RBP8.32□□□□□ -1.08
GGPS1-208ENST00000497327 PIP4K2BP78356 416 aa8.32□□□□□ -1.08
GGPS1-208ENST00000497327 DUOXA2Q1HG44 320 aa8.32□□□□□ -1.08
GGPS1-208ENST00000497327 C8orf34Q49A92 452 aa8.32□□□□□ -1.08
GGPS1-208ENST00000497327 WNT8BQ93098 351 aa8.32□□□□□ -1.08
GGPS1-208ENST00000497327 CEP41Q9BYV8 373 aa8.32□□□□□ -1.08
GGPS1-208ENST00000497327 PPP1R15AO75807 674 aaPredicted RBP8.31□□□□□ -1.08
GGPS1-208ENST00000497327 IGLV1-40P01703 118 aa8.31□□□□□ -1.08
GGPS1-208ENST00000497327 PCSK2P16519 638 aa8.31□□□□□ -1.08
GGPS1-208ENST00000497327 UVSSAQ2YD98 709 aa8.31□□□□□ -1.08
GGPS1-208ENST00000497327 HGSNATQ68CP4 663 aa8.31□□□□□ -1.08
GGPS1-208ENST00000497327 TMEM102Q8N9M5 508 aaPredicted RBP8.31□□□□□ -1.08
GGPS1-208ENST00000497327 OSGEPQ9NPF4 335 aa8.31□□□□□ -1.08
GGPS1-208ENST00000497327 GTF3C3Q9Y5Q9 886 aa8.31□□□□□ -1.08
GGPS1-208ENST00000497327 EFCAB5A4FU69 1503 aa8.3□□□□□ -1.08
GGPS1-208ENST00000497327 EREGO14944 169 aa8.3□□□□□ -1.08
GGPS1-208ENST00000497327 DHX15O43143 795 aaKnown RBP8.3□□□□□ -1.08
GGPS1-208ENST00000497327 CD97P48960 835 aa8.3□□□□□ -1.08
GGPS1-208ENST00000497327 UTP4Q969X6 686 aaKnown RBP8.3□□□□□ -1.08
GGPS1-208ENST00000497327 STOML1Q9UBI4 398 aa8.3□□□□□ -1.08
GGPS1-208ENST00000497327 CEP170Q5SW79 1584 aa8.3□□□□□ -1.08
GGPS1-208ENST00000497327 UGGT2Q9NYU1 1516 aa8.29□□□□□ -1.08
GGPS1-208ENST00000497327 CARNS1A5YM72 827 aa8.29□□□□□ -1.08
GGPS1-208ENST00000497327 FZD6O60353 706 aa8.29□□□□□ -1.08
GGPS1-208ENST00000497327 TNFRSF21O75509 655 aa8.29□□□□□ -1.08
GGPS1-208ENST00000497327 MED26O95402 600 aa8.29□□□□□ -1.08
GGPS1-208ENST00000497327 ALKBH2Q6NS38 261 aa8.29□□□□□ -1.08
GGPS1-208ENST00000497327 PMEPA1Q969W9 287 aa8.29□□□□□ -1.08
GGPS1-208ENST00000497327 NXPE3Q969Y0 559 aa8.29□□□□□ -1.08
GGPS1-208ENST00000497327 MYRFLQ96LU7 910 aa8.29□□□□□ -1.08
GGPS1-208ENST00000497327 ZKSCAN3Q9BRR0 538 aa8.29□□□□□ -1.08
GGPS1-208ENST00000497327 IQGAP2Q13576 1575 aa8.29□□□□□ -1.08
GGPS1-208ENST00000497327 CTTNBP2Q8WZ74 1663 aa8.29□□□□□ -1.08
GGPS1-208ENST00000497327 SAMD9Q5K651 1589 aa8.28□□□□□ -1.08
GGPS1-208ENST00000497327 GSC2O15499 205 aa8.28□□□□□ -1.08
GGPS1-208ENST00000497327 SSTR4P31391 388 aa8.28□□□□□ -1.08
GGPS1-208ENST00000497327 CABP4P57796 275 aa8.28□□□□□ -1.08
GGPS1-208ENST00000497327 OSMRQ99650 979 aa8.28□□□□□ -1.08
GGPS1-208ENST00000497327 C7orf69Q9H7B7 122 aa8.28□□□□□ -1.08
GGPS1-208ENST00000497327 FOXD3Q9UJU5 478 aaPredicted RBP8.28□□□□□ -1.08
GGPS1-208ENST00000497327 FHOD3Q2V2M9 1422 aa8.28□□□□□ -1.08
GGPS1-208ENST00000497327 FAM177BA6PVY3 158 aa8.27□□□□□ -1.09
GGPS1-208ENST00000497327 TGFB1P01137 390 aa8.27□□□□□ -1.09
GGPS1-208ENST00000497327 PREPP48147 710 aa8.27□□□□□ -1.09
GGPS1-208ENST00000497327 NLRP12P59046 1061 aa8.27□□□□□ -1.09
GGPS1-208ENST00000497327 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.27□□□□□ -1.09
GGPS1-208ENST00000497327 VN1R5Q7Z5H4 357 aa8.27□□□□□ -1.09
GGPS1-208ENST00000497327 ZDHHC13Q8IUH4 622 aa8.27□□□□□ -1.09
GGPS1-208ENST00000497327 TRIM42Q8IWZ5 723 aa8.27□□□□□ -1.09
GGPS1-208ENST00000497327 SNX29Q8TEQ0 813 aa8.27□□□□□ -1.09
GGPS1-208ENST00000497327 PCMTD2Q9NV79 361 aa8.27□□□□□ -1.09
GGPS1-208ENST00000497327 DISP1Q96F81 1524 aa8.26□□□□□ -1.09
GGPS1-208ENST00000497327 KIAA1324LA8MWY0 1029 aaPredicted RBP8.26□□□□□ -1.09
GGPS1-208ENST00000497327 FAM13AO94988 1023 aa8.26□□□□□ -1.09
GGPS1-208ENST00000497327 NFIAQ12857 509 aa8.26□□□□□ -1.09
GGPS1-208ENST00000497327 FAM20CQ8IXL6 584 aa8.26□□□□□ -1.09
GGPS1-208ENST00000497327 GJD3Q8N144 294 aa8.26□□□□□ -1.09
GGPS1-208ENST00000497327 SLC7A3Q8WY07 619 aa8.26□□□□□ -1.09
GGPS1-208ENST00000497327 HMX2A2RU54 273 aa8.25□□□□□ -1.09
GGPS1-208ENST00000497327 SOX1O00570 391 aaPredicted RBP8.25□□□□□ -1.09
GGPS1-208ENST00000497327 PHACTR2O75167 634 aa8.25□□□□□ -1.09
GGPS1-208ENST00000497327 PEAR1Q5VY43 1037 aaPredicted RBP8.25□□□□□ -1.09
GGPS1-208ENST00000497327 RNF43Q68DV7 783 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms