RNA–Protein interactions for RNA: ENST00000497055.1

SGIP1-214, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 2

Gene SGIP1, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-214ENST00000497055 ZFP42Q96MM3 310 aa6.65□□□□□ -1.34
SGIP1-214ENST00000497055 PURBQ96QR8 312 aaKnown RBP6.65□□□□□ -1.34
SGIP1-214ENST00000497055 TAF1DQ9H5J8 278 aaPredicted RBP6.65□□□□□ -1.34
SGIP1-214ENST00000497055 RAPGEFL1Q9UHV5 662 aa6.65□□□□□ -1.34
SGIP1-214ENST00000497055 POLR3AO14802 1390 aaPredicted RBP6.65□□□□□ -1.35
SGIP1-214ENST00000497055 C4BP0C0L5 1744 aa6.64□□□□□ -1.35
SGIP1-214ENST00000497055 DOT1LQ8TEK3 1739 aa6.64□□□□□ -1.35
SGIP1-214ENST00000497055 RGPD5Q99666 1765 aa6.64□□□□□ -1.35
SGIP1-214ENST00000497055 SPINT1O43278 529 aa6.64□□□□□ -1.35
SGIP1-214ENST00000497055 PLA2G5P39877 138 aa6.64□□□□□ -1.35
SGIP1-214ENST00000497055 RELBQ01201 579 aa6.64□□□□□ -1.35
SGIP1-214ENST00000497055 NCOA4Q13772 614 aa6.64□□□□□ -1.35
SGIP1-214ENST00000497055 C6orf118Q5T5N4 469 aa6.64□□□□□ -1.35
SGIP1-214ENST00000497055 CTU1Q7Z7A3 348 aaKnown RBP6.64□□□□□ -1.35
SGIP1-214ENST00000497055 DEPDC4Q8N2C3 294 aa6.64□□□□□ -1.35
SGIP1-214ENST00000497055 KIFC2Q96AC6 838 aa6.64□□□□□ -1.35
SGIP1-214ENST00000497055 FAM122AQ96E09 287 aa6.64□□□□□ -1.35
SGIP1-214ENST00000497055 ZNF395Q9H8N7 513 aaPredicted RBP6.64□□□□□ -1.35
SGIP1-214ENST00000497055 DDX21Q9NR30 783 aaKnown RBP eCLIP6.64□□□□□ -1.35
SGIP1-214ENST00000497055 GMPR2Q9P2T1 348 aaKnown RBP6.64□□□□□ -1.35
SGIP1-214ENST00000497055 NOD1Q9Y239 953 aa6.64□□□□□ -1.35
SGIP1-214ENST00000497055 PARP3Q9Y6F1 533 aa6.64□□□□□ -1.35
SGIP1-214ENST00000497055 PIK3C2GO75747 1445 aa6.64□□□□□ -1.35
SGIP1-214ENST00000497055 COL6A3P12111 3177 aa6.64□□□□□ -1.35
SGIP1-214ENST00000497055 USP17L3A6NCW0 530 aa6.63□□□□□ -1.35
SGIP1-214ENST00000497055 USP17L4A6NCW7 530 aa6.63□□□□□ -1.35
SGIP1-214ENST00000497055 SLIT3O75094 1523 aa6.63□□□□□ -1.35
SGIP1-214ENST00000497055 GNRH1P01148 92 aa6.63□□□□□ -1.35
SGIP1-214ENST00000497055 TMF1P82094 1093 aa6.63□□□□□ -1.35
SGIP1-214ENST00000497055 FMR1Q06787 632 aaKnown RBP eCLIP6.63□□□□□ -1.35
SGIP1-214ENST00000497055 NBPF1Q3BBV0 1214 aa6.63□□□□□ -1.35
SGIP1-214ENST00000497055 CFAP70Q5T0N1 1121 aa6.63□□□□□ -1.35
SGIP1-214ENST00000497055 USP17L2Q6R6M4 530 aa6.63□□□□□ -1.35
SGIP1-214ENST00000497055 UBR3Q6ZT12 1888 aa6.63□□□□□ -1.35
SGIP1-214ENST00000497055 USP17L1Q7RTZ2 530 aa6.63□□□□□ -1.35
SGIP1-214ENST00000497055 ARHGEF25Q86VW2 580 aa6.63□□□□□ -1.35
SGIP1-214ENST00000497055 NLGN1Q8N2Q7 840 aa6.63□□□□□ -1.35
SGIP1-214ENST00000497055 SNX27Q96L92 541 aa6.63□□□□□ -1.35
SGIP1-214ENST00000497055 SERPINA10Q9UK55 444 aa6.63□□□□□ -1.35
SGIP1-214ENST00000497055 MAFBQ9Y5Q3 323 aaPredicted RBP6.63□□□□□ -1.35
SGIP1-214ENST00000497055 TAF1LQ8IZX4 1826 aa6.62□□□□□ -1.35
SGIP1-214ENST00000497055 PALLDQ8WX93 1383 aa6.62□□□□□ -1.35
SGIP1-214ENST00000497055 A0A1W2PRU2 124 aa6.62□□□□□ -1.35
SGIP1-214ENST00000497055 NFKBIEO00221 500 aa6.62□□□□□ -1.35
SGIP1-214ENST00000497055 LMOD1P29536 600 aaPredicted RBP6.62□□□□□ -1.35
SGIP1-214ENST00000497055 ZNF787Q6DD87 383 aa6.62□□□□□ -1.35
SGIP1-214ENST00000497055 TRIM47Q96LD4 638 aa6.62□□□□□ -1.35
SGIP1-214ENST00000497055 C14orf93Q9H972 538 aaKnown RBP6.62□□□□□ -1.35
SGIP1-214ENST00000497055 TRAK1Q9UPV9 953 aa6.62□□□□□ -1.35
SGIP1-214ENST00000497055 CCDC88AQ3V6T2 1871 aa6.62□□□□□ -1.35
SGIP1-214ENST00000497055 C4AP0C0L4 1744 aa6.62□□□□□ -1.35
SGIP1-214ENST00000497055 TRIM50Q86XT4 487 aa6.61□□□□□ -1.35
SGIP1-214ENST00000497055 CCDC97Q96F63 343 aaPredicted RBP6.61□□□□□ -1.35
SGIP1-214ENST00000497055 INSM2Q96T92 566 aaPredicted RBP6.61□□□□□ -1.35
SGIP1-214ENST00000497055 PCDHGA11Q9Y5H2 935 aa6.61□□□□□ -1.35
SGIP1-214ENST00000497055 TTLL8A6PVC2 850 aa6.6□□□□□ -1.35
SGIP1-214ENST00000497055 GTF2IP78347 998 aa6.6□□□□□ -1.35
SGIP1-214ENST00000497055 CLN3Q13286 438 aa6.6□□□□□ -1.35
SGIP1-214ENST00000497055 C1orf115Q9H7X2 142 aa6.6□□□□□ -1.35
SGIP1-214ENST00000497055 ARHGEF10LQ9HCE6 1279 aa6.6□□□□□ -1.35
SGIP1-214ENST00000497055 MEN1O00255 615 aa6.59□□□□□ -1.35
SGIP1-214ENST00000497055 SNRPBP14678 240 aaKnown RBP6.59□□□□□ -1.35
SGIP1-214ENST00000497055 EPHX2P34913 555 aa6.59□□□□□ -1.35
SGIP1-214ENST00000497055 CTSOP43234 321 aaPredicted RBP6.59□□□□□ -1.35
SGIP1-214ENST00000497055 ATP1A2P50993 1020 aa6.59□□□□□ -1.35
SGIP1-214ENST00000497055 CST9Q5W186 159 aa6.59□□□□□ -1.35
SGIP1-214ENST00000497055 LINC00116Q8NCU8 138 aa6.59□□□□□ -1.35
SGIP1-214ENST00000497055 XAGE2Q96GT9 111 aa6.59□□□□□ -1.35
SGIP1-214ENST00000497055 NLRP3Q96P20 1036 aa6.59□□□□□ -1.35
SGIP1-214ENST00000497055 ZIC5Q96T25 663 aa6.59□□□□□ -1.35
SGIP1-214ENST00000497055 VRTNQ9H8Y1 702 aa6.59□□□□□ -1.35
SGIP1-214ENST00000497055 POLMQ9NP87 494 aaPredicted RBP6.59□□□□□ -1.35
SGIP1-214ENST00000497055 HACL1Q9UJ83 578 aa6.59□□□□□ -1.35
SGIP1-214ENST00000497055 H0YGN5 161 aa6.58□□□□□ -1.36
SGIP1-214ENST00000497055 TRAF5O00463 557 aa6.58□□□□□ -1.36
SGIP1-214ENST00000497055 ZBTB7BO15156 539 aaPredicted RBP6.58□□□□□ -1.36
SGIP1-214ENST00000497055 MAN1A2O60476 641 aa6.58□□□□□ -1.36
SGIP1-214ENST00000497055 TRPA1O75762 1119 aa6.58□□□□□ -1.36
SGIP1-214ENST00000497055 RFX1P22670 979 aa6.58□□□□□ -1.36
SGIP1-214ENST00000497055 GPC1P35052 558 aa6.58□□□□□ -1.36
SGIP1-214ENST00000497055 RNF144AP50876 292 aaPredicted RBP6.58□□□□□ -1.36
SGIP1-214ENST00000497055 AKAP4Q5JQC9 854 aa6.58□□□□□ -1.36
SGIP1-214ENST00000497055 PNMA8AQ86V59 439 aaPredicted RBP6.58□□□□□ -1.36
SGIP1-214ENST00000497055 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.58□□□□□ -1.36
SGIP1-214ENST00000497055 OGFOD1Q8N543 542 aa6.58□□□□□ -1.36
SGIP1-214ENST00000497055 KCNH5Q8NCM2 988 aa6.58□□□□□ -1.36
SGIP1-214ENST00000497055 CNKSR1Q969H4 720 aa6.58□□□□□ -1.36
SGIP1-214ENST00000497055 ESYT1Q9BSJ8 1104 aa6.58□□□□□ -1.36
SGIP1-214ENST00000497055 CDK19Q9BWU1 502 aa6.58□□□□□ -1.36
SGIP1-214ENST00000497055 RAB6BQ9NRW1 208 aa6.58□□□□□ -1.36
SGIP1-214ENST00000497055 DNAAF2Q9NVR5 837 aaKnown RBP6.58□□□□□ -1.36
SGIP1-214ENST00000497055 PODXL2Q9NZ53 605 aa6.58□□□□□ -1.36
SGIP1-214ENST00000497055 TTC28Q96AY4 2481 aa6.58□□□□□ -1.36
SGIP1-214ENST00000497055 FIGNL2A6NMB9 653 aa6.57□□□□□ -1.36
SGIP1-214ENST00000497055 IL2RAP01589 272 aa6.57□□□□□ -1.36
SGIP1-214ENST00000497055 INHAP05111 366 aa6.57□□□□□ -1.36
SGIP1-214ENST00000497055 GYS1P13807 737 aa6.57□□□□□ -1.36
SGIP1-214ENST00000497055 RASA1P20936 1047 aa6.57□□□□□ -1.36
SGIP1-214ENST00000497055 SCNN1DP51172 638 aa6.57□□□□□ -1.36
SGIP1-214ENST00000497055 GDF10P55107 478 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms