RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 OGFOD1Q8N543 542 aa12.71□□□□□ -0.37
SMARCAL1-213ENST00000496037 EFCAB3Q8N7B9 438 aa12.71□□□□□ -0.37
SMARCAL1-213ENST00000496037 SHISA4Q96DD7 197 aa12.71□□□□□ -0.37
SMARCAL1-213ENST00000496037 PRDM6Q9NQX0 595 aa12.71□□□□□ -0.37
SMARCAL1-213ENST00000496037 STK24Q9Y6E0 443 aa12.71□□□□□ -0.37
SMARCAL1-213ENST00000496037 NLRP10Q86W26 655 aa12.7□□□□□ -0.38
SMARCAL1-213ENST00000496037 GMLQ99445 158 aa12.7□□□□□ -0.38
SMARCAL1-213ENST00000496037 SCUBE2Q9NQ36 999 aa12.7□□□□□ -0.38
SMARCAL1-213ENST00000496037 MIS18AQ9NYP9 233 aa12.7□□□□□ -0.38
SMARCAL1-213ENST00000496037 TAF1P21675 1872 aa12.7□□□□□ -0.38
SMARCAL1-213ENST00000496037 SPTBN5Q9NRC6 3674 aaKnown RBP12.69□□□□□ -0.38
SMARCAL1-213ENST00000496037 USP17L3A6NCW0 530 aa12.69□□□□□ -0.38
SMARCAL1-213ENST00000496037 USP17L4A6NCW7 530 aa12.69□□□□□ -0.38
SMARCAL1-213ENST00000496037 WNT10BO00744 389 aa12.69□□□□□ -0.38
SMARCAL1-213ENST00000496037 PPP1R12BO60237 982 aaPredicted RBP12.69□□□□□ -0.38
SMARCAL1-213ENST00000496037 USP17L1Q7RTZ2 530 aa12.69□□□□□ -0.38
SMARCAL1-213ENST00000496037 PDCD7Q8N8D1 485 aaKnown RBP12.69□□□□□ -0.38
SMARCAL1-213ENST00000496037 PNISRQ8TF01 805 aaKnown RBP12.69□□□□□ -0.38
SMARCAL1-213ENST00000496037 ANKIB1Q9P2G1 1089 aa12.69□□□□□ -0.38
SMARCAL1-213ENST00000496037 GGA1Q9UJY5 639 aa12.69□□□□□ -0.38
SMARCAL1-213ENST00000496037 COL1A1P02452 1464 aaPredicted RBP12.68□□□□□ -0.38
SMARCAL1-213ENST00000496037 SASH1O94885 1247 aa12.68□□□□□ -0.38
SMARCAL1-213ENST00000496037 KIF22Q14807 665 aa12.68□□□□□ -0.38
SMARCAL1-213ENST00000496037 Q7L0L9 218 aa12.68□□□□□ -0.38
SMARCAL1-213ENST00000496037 CLMNQ96JQ2 1002 aa12.68□□□□□ -0.38
SMARCAL1-213ENST00000496037 RSPH6AQ9H0K4 717 aa12.68□□□□□ -0.38
SMARCAL1-213ENST00000496037 FZD1Q9UP38 647 aa12.68□□□□□ -0.38
SMARCAL1-213ENST00000496037 LAMB1P07942 1786 aa12.68□□□□□ -0.38
SMARCAL1-213ENST00000496037 HTATSF1O43719 755 aaKnown RBP12.67□□□□□ -0.38
SMARCAL1-213ENST00000496037 EVI5O60447 810 aa12.67□□□□□ -0.38
SMARCAL1-213ENST00000496037 TAF1CQ15572 869 aaPredicted RBP12.67□□□□□ -0.38
SMARCAL1-213ENST00000496037 MAP3K11Q16584 847 aa12.67□□□□□ -0.38
SMARCAL1-213ENST00000496037 ZFYVE28Q9HCC9 887 aa12.67□□□□□ -0.38
SMARCAL1-213ENST00000496037 STAP2Q9UGK3 403 aa12.67□□□□□ -0.38
SMARCAL1-213ENST00000496037 PSME4Q14997 1843 aa12.67□□□□□ -0.38
SMARCAL1-213ENST00000496037 MYO3BQ8WXR4 1341 aa12.66□□□□□ -0.38
SMARCAL1-213ENST00000496037 UNCXA6NJT0 531 aa12.66□□□□□ -0.38
SMARCAL1-213ENST00000496037 WDHD1O75717 1129 aaPredicted RBP12.66□□□□□ -0.38
SMARCAL1-213ENST00000496037 FARP2O94887 1054 aaPredicted RBP12.66□□□□□ -0.38
SMARCAL1-213ENST00000496037 GJA8P48165 433 aa12.66□□□□□ -0.38
SMARCAL1-213ENST00000496037 EIF4A1P60842 406 aaKnown RBP12.66□□□□□ -0.38
SMARCAL1-213ENST00000496037 MTFR1Q15390 333 aa12.66□□□□□ -0.38
SMARCAL1-213ENST00000496037 SF3B3Q15393 1217 aaKnown RBP12.66□□□□□ -0.38
SMARCAL1-213ENST00000496037 CC2D1BQ5T0F9 858 aaKnown RBP12.66□□□□□ -0.38
SMARCAL1-213ENST00000496037 PODNQ7Z5L7 613 aa12.66□□□□□ -0.38
SMARCAL1-213ENST00000496037 FBXW7Q969H0 707 aa12.66□□□□□ -0.38
SMARCAL1-213ENST00000496037 PTPN18Q99952 460 aa12.66□□□□□ -0.38
SMARCAL1-213ENST00000496037 THUMPD2Q9BTF0 503 aaKnown RBP12.66□□□□□ -0.38
SMARCAL1-213ENST00000496037 TESPA1A2RU30 521 aaPredicted RBP12.65□□□□□ -0.38
SMARCAL1-213ENST00000496037 GNRH1P01148 92 aa12.65□□□□□ -0.38
SMARCAL1-213ENST00000496037 IREB2P48200 963 aaKnown RBP12.65□□□□□ -0.38
SMARCAL1-213ENST00000496037 PRMT2P55345 433 aa12.65□□□□□ -0.38
SMARCAL1-213ENST00000496037 RPS8P62241 208 aaKnown RBP12.65□□□□□ -0.38
SMARCAL1-213ENST00000496037 UBE2Q1Q7Z7E8 422 aa12.65□□□□□ -0.38
SMARCAL1-213ENST00000496037 MTMR10Q9NXD2 777 aa12.65□□□□□ -0.38
SMARCAL1-213ENST00000496037 ZNF646O15015 1829 aaPredicted RBP12.65□□□□□ -0.39
SMARCAL1-213ENST00000496037 MMP14P50281 582 aa12.64□□□□□ -0.39
SMARCAL1-213ENST00000496037 DEFB129Q9H1M3 183 aa12.64□□□□□ -0.39
SMARCAL1-213ENST00000496037 EYSQ5T1H1 3165 aa12.64□□□□□ -0.39
SMARCAL1-213ENST00000496037 GJB1P08034 283 aa12.63□□□□□ -0.39
SMARCAL1-213ENST00000496037 COL9A1P20849 921 aa12.63□□□□□ -0.39
SMARCAL1-213ENST00000496037 GJA5P36382 358 aa12.63□□□□□ -0.39
SMARCAL1-213ENST00000496037 EIF4G2P78344 907 aaKnown RBP eCLIP12.63□□□□□ -0.39
SMARCAL1-213ENST00000496037 ZNF428Q96B54 188 aa12.63□□□□□ -0.39
SMARCAL1-213ENST00000496037 NUDCQ9Y266 331 aa12.63□□□□□ -0.39
SMARCAL1-213ENST00000496037 COL4A1P02462 1669 aa12.62□□□□□ -0.39
SMARCAL1-213ENST00000496037 SSC5DA1L4H1 1573 aa12.62□□□□□ -0.39
SMARCAL1-213ENST00000496037 EIF2S2P20042 333 aaKnown RBP12.62□□□□□ -0.39
SMARCAL1-213ENST00000496037 LACTBP83111 547 aaPredicted RBP12.62□□□□□ -0.39
SMARCAL1-213ENST00000496037 AIMP1Q12904 312 aaKnown RBP12.62□□□□□ -0.39
SMARCAL1-213ENST00000496037 SUPT20HL1Q3ZLR7 823 aa12.62□□□□□ -0.39
SMARCAL1-213ENST00000496037 DACT2Q5SW24 774 aa12.62□□□□□ -0.39
SMARCAL1-213ENST00000496037 LRP10Q7Z4F1 713 aa12.62□□□□□ -0.39
SMARCAL1-213ENST00000496037 ANKRD13AQ8IZ07 590 aa12.62□□□□□ -0.39
SMARCAL1-213ENST00000496037 CFAP53Q96M91 514 aa12.62□□□□□ -0.39
SMARCAL1-213ENST00000496037 MXD3Q9BW11 206 aa12.62□□□□□ -0.39
SMARCAL1-213ENST00000496037 ARHGAP39Q9C0H5 1083 aa12.62□□□□□ -0.39
SMARCAL1-213ENST00000496037 RNF208Q9H0X6 261 aa12.62□□□□□ -0.39
SMARCAL1-213ENST00000496037 PPP2R3BQ9Y5P8 575 aa12.62□□□□□ -0.39
SMARCAL1-213ENST00000496037 XDHP47989 1333 aa12.62□□□□□ -0.39
SMARCAL1-213ENST00000496037 RPTORQ8N122 1335 aa12.62□□□□□ -0.39
SMARCAL1-213ENST00000496037 ANXA1P04083 346 aa12.61□□□□□ -0.39
SMARCAL1-213ENST00000496037 U2AF1L5P0DN76 240 aaPredicted RBP12.61□□□□□ -0.39
SMARCAL1-213ENST00000496037 CCL5P13501 91 aa12.61□□□□□ -0.39
SMARCAL1-213ENST00000496037 BMP8BP34820 402 aa12.61□□□□□ -0.39
SMARCAL1-213ENST00000496037 UBXN2AP68543 259 aa12.61□□□□□ -0.39
SMARCAL1-213ENST00000496037 U2AF1Q01081 240 aaKnown RBP eCLIP12.61□□□□□ -0.39
SMARCAL1-213ENST00000496037 COPS6Q7L5N1 327 aa12.61□□□□□ -0.39
SMARCAL1-213ENST00000496037 RAET1EQ8TD07 263 aa12.61□□□□□ -0.39
SMARCAL1-213ENST00000496037 OPTNQ96CV9 577 aa12.61□□□□□ -0.39
SMARCAL1-213ENST00000496037 FAM89AQ96GI7 184 aa12.61□□□□□ -0.39
SMARCAL1-213ENST00000496037 BIN2Q9UBW5 565 aaPredicted RBP12.61□□□□□ -0.39
SMARCAL1-213ENST00000496037 CCL15-CCL14A0A0B4J2E2 113 aa12.6□□□□□ -0.39
SMARCAL1-213ENST00000496037 HSPA5P11021 654 aaKnown RBP12.6□□□□□ -0.39
SMARCAL1-213ENST00000496037 ATP2B4P23634 1241 aa12.6□□□□□ -0.39
SMARCAL1-213ENST00000496037 GRK4P32298 578 aa12.6□□□□□ -0.39
SMARCAL1-213ENST00000496037 GTF2A2P52657 109 aa12.6□□□□□ -0.39
SMARCAL1-213ENST00000496037 PDIA6Q15084 440 aa12.6□□□□□ -0.39
SMARCAL1-213ENST00000496037 CCL15Q16663 113 aa12.6□□□□□ -0.39
SMARCAL1-213ENST00000496037 PROSER3Q2NL68 480 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms