RNA–Protein interactions for RNA: ENST00000493518.5

CACUL1-206, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-206ENST00000493518 NFXL1Q6ZNB6 911 aa18.12■□□□□ 0.49
CACUL1-206ENST00000493518 KIF28PB7ZC32 967 aa18.11■□□□□ 0.49
CACUL1-206ENST00000493518 CYP27B1O15528 508 aa18.11■□□□□ 0.49
CACUL1-206ENST00000493518 URI1O94763 535 aaPredicted RBP18.11■□□□□ 0.49
CACUL1-206ENST00000493518 CARMIL3Q8ND23 1372 aa18.11■□□□□ 0.49
CACUL1-206ENST00000493518 ZNF202O95125 648 aa18.11■□□□□ 0.49
CACUL1-206ENST00000493518 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.11■□□□□ 0.49
CACUL1-206ENST00000493518 HELBQ8NG08 1087 aaPredicted RBP18.11■□□□□ 0.49
CACUL1-206ENST00000493518 FGAP02671 866 aa18.11■□□□□ 0.49
CACUL1-206ENST00000493518 ZAP70P43403 619 aa18.11■□□□□ 0.49
CACUL1-206ENST00000493518 IFNL2Q8IZJ0 200 aa18.11■□□□□ 0.49
CACUL1-206ENST00000493518 PUS7LQ9H0K6 701 aaKnown RBP18.11■□□□□ 0.49
CACUL1-206ENST00000493518 SNAP23O00161 211 aa18.1■□□□□ 0.49
CACUL1-206ENST00000493518 RNF113AO15541 343 aaKnown RBP18.1■□□□□ 0.49
CACUL1-206ENST00000493518 PNOCQ13519 176 aa18.1■□□□□ 0.49
CACUL1-206ENST00000493518 RBM43Q6ZSC3 357 aaKnown RBP18.1■□□□□ 0.49
CACUL1-206ENST00000493518 SMARCC2Q8TAQ2 1214 aa18.1■□□□□ 0.49
CACUL1-206ENST00000493518 OGFRQ9NZT2 677 aa18.1■□□□□ 0.49
CACUL1-206ENST00000493518 ZNF827Q17R98 1081 aa18.1■□□□□ 0.49
CACUL1-206ENST00000493518 UTP14AQ9BVJ6 771 aaKnown RBP18.1■□□□□ 0.49
CACUL1-206ENST00000493518 SENP2Q9HC62 589 aa18.1■□□□□ 0.49
CACUL1-206ENST00000493518 KIAA1468Q9P260 1216 aa18.1■□□□□ 0.49
CACUL1-206ENST00000493518 TUBGCP6Q96RT7 1819 aa18.1■□□□□ 0.49
CACUL1-206ENST00000493518 CTAGE5O15320 804 aa18.1■□□□□ 0.49
CACUL1-206ENST00000493518 CCDC57Q2TAC2 916 aa18.1■□□□□ 0.49
CACUL1-206ENST00000493518 NKX2-3Q8TAU0 364 aa18.1■□□□□ 0.49
CACUL1-206ENST00000493518 DPF2Q92785 391 aa18.1■□□□□ 0.49
CACUL1-206ENST00000493518 NBPF26B4DH59 902 aa18.09■□□□□ 0.49
CACUL1-206ENST00000493518 IMMTQ16891 758 aaKnown RBP18.09■□□□□ 0.49
CACUL1-206ENST00000493518 NBPF14Q5TI25 921 aa18.09■□□□□ 0.49
CACUL1-206ENST00000493518 ARMCX5Q6P1M9 558 aa18.09■□□□□ 0.49
CACUL1-206ENST00000493518 NBPF10Q6P3W6 841 aaKnown RBP18.09■□□□□ 0.49
CACUL1-206ENST00000493518 ATG9AQ7Z3C6 839 aa18.09■□□□□ 0.49
CACUL1-206ENST00000493518 NBPF15Q8N660 670 aa18.09■□□□□ 0.49
CACUL1-206ENST00000493518 MRFAP1L1Q96HT8 127 aa18.09■□□□□ 0.49
CACUL1-206ENST00000493518 ZKSCAN3Q9BRR0 538 aa18.09■□□□□ 0.49
CACUL1-206ENST00000493518 ERBB3P21860 1342 aa18.09■□□□□ 0.49
CACUL1-206ENST00000493518 NAA16Q6N069 864 aaPredicted RBP18.09■□□□□ 0.49
CACUL1-206ENST00000493518 NBPF11Q86T75 865 aa18.09■□□□□ 0.49
CACUL1-206ENST00000493518 ENGASEQ8NFI3 743 aa18.09■□□□□ 0.49
CACUL1-206ENST00000493518 CWC25Q9NXE8 425 aaPredicted RBP18.09■□□□□ 0.49
CACUL1-206ENST00000493518 HMGB1P09429 215 aaKnown RBP18.08■□□□□ 0.49
CACUL1-206ENST00000493518 E4F1Q66K89 784 aaPredicted RBP18.08■□□□□ 0.49
CACUL1-206ENST00000493518 FMR1NBQ8N0W7 255 aaPredicted RBP18.08■□□□□ 0.49
CACUL1-206ENST00000493518 LINC00301Q8NCQ3 95 aa18.08■□□□□ 0.49
CACUL1-206ENST00000493518 STRN4Q9NRL3 753 aa18.08■□□□□ 0.49
CACUL1-206ENST00000493518 UBR1Q8IWV7 1749 aa18.08■□□□□ 0.49
CACUL1-206ENST00000493518 PFKFB1P16118 471 aa18.08■□□□□ 0.48
CACUL1-206ENST00000493518 CCDC158Q5M9N0 1113 aa18.08■□□□□ 0.48
CACUL1-206ENST00000493518 TMEM232C9JQI7 657 aa18.08■□□□□ 0.48
CACUL1-206ENST00000493518 ZNF213O14771 459 aa18.08■□□□□ 0.48
CACUL1-206ENST00000493518 SLU7O95391 586 aaKnown RBP18.08■□□□□ 0.48
CACUL1-206ENST00000493518 TSGA10IPQ3SY00 556 aa18.08■□□□□ 0.48
CACUL1-206ENST00000493518 ARHGAP29Q52LW3 1261 aa18.08■□□□□ 0.48
CACUL1-206ENST00000493518 MYSM1Q5VVJ2 828 aa18.08■□□□□ 0.48
CACUL1-206ENST00000493518 TRMT44Q8IYL2 757 aaKnown RBP18.08■□□□□ 0.48
CACUL1-206ENST00000493518 ZFP91Q96JP5 570 aaPredicted RBP18.08■□□□□ 0.48
CACUL1-206ENST00000493518 FOXN1O15353 648 aa18.07■□□□□ 0.48
CACUL1-206ENST00000493518 COBLO75128 1261 aa18.07■□□□□ 0.48
CACUL1-206ENST00000493518 ZMYM1Q5SVZ6 1142 aa18.07■□□□□ 0.48
CACUL1-206ENST00000493518 WDHD1O75717 1129 aaPredicted RBP18.07■□□□□ 0.48
CACUL1-206ENST00000493518 EXOSC10Q01780 885 aaKnown RBP18.07■□□□□ 0.48
CACUL1-206ENST00000493518 CPLX3Q8WVH0 158 aa18.07■□□□□ 0.48
CACUL1-206ENST00000493518 XAGE2Q96GT9 111 aa18.07■□□□□ 0.48
CACUL1-206ENST00000493518 PPP1R13BQ96KQ4 1090 aa18.07■□□□□ 0.48
CACUL1-206ENST00000493518 ALG1Q9BT22 464 aa18.07■□□□□ 0.48
CACUL1-206ENST00000493518 GTPBP4Q9BZE4 634 aaKnown RBP18.07■□□□□ 0.48
CACUL1-206ENST00000493518 NALCNQ8IZF0 1738 aa18.06■□□□□ 0.48
CACUL1-206ENST00000493518 RGPD2P0DJD1 1756 aa18.06■□□□□ 0.48
CACUL1-206ENST00000493518 B4E1Z4 1266 aa18.06■□□□□ 0.48
CACUL1-206ENST00000493518 CDK11BP21127 795 aaKnown RBP18.06■□□□□ 0.48
CACUL1-206ENST00000493518 UBASH3AP57075 661 aa18.06■□□□□ 0.48
CACUL1-206ENST00000493518 TRDNQ13061 729 aa18.06■□□□□ 0.48
CACUL1-206ENST00000493518 UTYO14607 1347 aa18.06■□□□□ 0.48
CACUL1-206ENST00000493518 EYA2O00167 538 aa18.06■□□□□ 0.48
CACUL1-206ENST00000493518 SYKP43405 635 aa18.06■□□□□ 0.48
CACUL1-206ENST00000493518 TPM4P67936 248 aa18.06■□□□□ 0.48
CACUL1-206ENST00000493518 FOXO4P98177 505 aa18.06■□□□□ 0.48
CACUL1-206ENST00000493518 FANCCQ00597 558 aa18.06■□□□□ 0.48
CACUL1-206ENST00000493518 MNS1Q8NEH6 495 aa18.06■□□□□ 0.48
CACUL1-206ENST00000493518 ADALQ6DHV7 355 aa18.06■□□□□ 0.48
CACUL1-206ENST00000493518 GRAMD1CQ8IYS0 662 aa18.06■□□□□ 0.48
CACUL1-206ENST00000493518 LLPHQ9BRT6 129 aaKnown RBP18.06■□□□□ 0.48
CACUL1-206ENST00000493518 DDX41Q9UJV9 622 aaKnown RBP18.06■□□□□ 0.48
CACUL1-206ENST00000493518 NRDCO43847 1150 aa18.05■□□□□ 0.48
CACUL1-206ENST00000493518 SEC31AO94979 1220 aaKnown RBP18.05■□□□□ 0.48
CACUL1-206ENST00000493518 KLHL10Q6JEL2 608 aa18.05■□□□□ 0.48
CACUL1-206ENST00000493518 hCG_1642624A0A1W2PR95 340 aa18.05■□□□□ 0.48
CACUL1-206ENST00000493518 KRT222Q8N1A0 295 aa18.05■□□□□ 0.48
CACUL1-206ENST00000493518 ZNF397Q8NF99 534 aaPredicted RBP18.05■□□□□ 0.48
CACUL1-206ENST00000493518 GPAA1O43292 621 aa18.04■□□□□ 0.48
CACUL1-206ENST00000493518 PDIA4P13667 645 aaKnown RBP18.04■□□□□ 0.48
CACUL1-206ENST00000493518 SLC9C2Q5TAH2 1124 aa18.04■□□□□ 0.48
CACUL1-206ENST00000493518 ANO1Q5XXA6 986 aa18.04■□□□□ 0.48
CACUL1-206ENST00000493518 FBXO18Q8NFZ0 1043 aa18.04■□□□□ 0.48
CACUL1-206ENST00000493518 PLBD2Q8NHP8 589 aa18.04■□□□□ 0.48
CACUL1-206ENST00000493518 FEZ1Q99689 392 aa18.04■□□□□ 0.48
CACUL1-206ENST00000493518 IL15P40933 162 aaPredicted RBP18.04■□□□□ 0.48
CACUL1-206ENST00000493518 TOM1L2Q6ZVM7 507 aa18.04■□□□□ 0.48
CACUL1-206ENST00000493518 DESI2Q9BSY9 194 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms