RNA–Protein interactions for RNA: ENST00000493377.1

SYCP1-208, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 783 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-208ENST00000493377 SIX5Q8N196 739 aa7.62□□□□□ -1.19
SYCP1-208ENST00000493377 CMTR1Q8N1G2 835 aaKnown RBP7.62□□□□□ -1.19
SYCP1-208ENST00000493377 USP20Q9Y2K6 914 aa7.62□□□□□ -1.19
SYCP1-208ENST00000493377 BNIP3Q12983 259 aa7.61□□□□□ -1.19
SYCP1-208ENST00000493377 NLRP13Q86W25 1043 aa7.61□□□□□ -1.19
SYCP1-208ENST00000493377 OR13H1Q8NG92 308 aa7.61□□□□□ -1.19
SYCP1-208ENST00000493377 RASSF4Q9H2L5 321 aa7.61□□□□□ -1.19
SYCP1-208ENST00000493377 RBM19Q9Y4C8 960 aaKnown RBP7.61□□□□□ -1.19
SYCP1-208ENST00000493377 KCNMB2Q9Y691 235 aa7.61□□□□□ -1.19
SYCP1-208ENST00000493377 KRT1P04264 644 aa7.6□□□□□ -1.19
SYCP1-208ENST00000493377 RGL4Q8IZJ4 473 aa7.6□□□□□ -1.19
SYCP1-208ENST00000493377 BORCS6Q96GS4 357 aa7.59□□□□□ -1.19
SYCP1-208ENST00000493377 TMPRSS5Q9H3S3 457 aa7.59□□□□□ -1.19
SYCP1-208ENST00000493377 FOXD2O60548 495 aaPredicted RBP7.58□□□□□ -1.2
SYCP1-208ENST00000493377 C11orf91Q3C1V1 193 aa7.58□□□□□ -1.2
SYCP1-208ENST00000493377 COL13A1Q5TAT6 717 aaPredicted RBP7.58□□□□□ -1.2
SYCP1-208ENST00000493377 PBX4Q9BYU1 374 aa7.58□□□□□ -1.2
SYCP1-208ENST00000493377 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.57□□□□□ -1.2
SYCP1-208ENST00000493377 MAP7Q14244 749 aa7.57□□□□□ -1.2
SYCP1-208ENST00000493377 CIAPIN1Q6FI81 312 aa7.57□□□□□ -1.2
SYCP1-208ENST00000493377 PLEKHM2Q8IWE5 1019 aa7.57□□□□□ -1.2
SYCP1-208ENST00000493377 OGFOD1Q8N543 542 aa7.57□□□□□ -1.2
SYCP1-208ENST00000493377 C2CD4AQ8NCU7 369 aaPredicted RBP7.57□□□□□ -1.2
SYCP1-208ENST00000493377 CRIM1Q9NZV1 1036 aa7.57□□□□□ -1.2
SYCP1-208ENST00000493377 NPIPB6E9PJ23 425 aa7.56□□□□□ -1.2
SYCP1-208ENST00000493377 ARL4DP49703 201 aa7.56□□□□□ -1.2
SYCP1-208ENST00000493377 GGNQ86UU5 652 aa7.56□□□□□ -1.2
SYCP1-208ENST00000493377 LIN37Q96GY3 246 aaPredicted RBP7.56□□□□□ -1.2
SYCP1-208ENST00000493377 VAV3Q9UKW4 847 aa7.56□□□□□ -1.2
SYCP1-208ENST00000493377 ABL2P42684 1182 aa7.55□□□□□ -1.2
SYCP1-208ENST00000493377 QTRT2Q9H974 415 aaKnown RBP7.55□□□□□ -1.2
SYCP1-208ENST00000493377 DKK1O94907 266 aa7.54□□□□□ -1.2
SYCP1-208ENST00000493377 KIF4AO95239 1232 aa7.54□□□□□ -1.2
SYCP1-208ENST00000493377 DRD2P14416 443 aa7.54□□□□□ -1.2
SYCP1-208ENST00000493377 SYN1P17600 705 aa7.54□□□□□ -1.2
SYCP1-208ENST00000493377 PRKCQQ04759 706 aa7.54□□□□□ -1.2
SYCP1-208ENST00000493377 C19orf57Q0VDD7 668 aa7.54□□□□□ -1.2
SYCP1-208ENST00000493377 SLC23A3Q6PIS1 610 aa7.54□□□□□ -1.2
SYCP1-208ENST00000493377 SLC7A3Q8WY07 619 aa7.54□□□□□ -1.2
SYCP1-208ENST00000493377 IGFBP4P22692 258 aa7.53□□□□□ -1.2
SYCP1-208ENST00000493377 KRTAP10-2P60368 255 aa7.53□□□□□ -1.2
SYCP1-208ENST00000493377 KCNA10Q16322 511 aa7.53□□□□□ -1.2
SYCP1-208ENST00000493377 NETO1Q8TDF5 533 aa7.53□□□□□ -1.2
SYCP1-208ENST00000493377 MYO19Q96H55 970 aa7.53□□□□□ -1.2
SYCP1-208ENST00000493377 POP1Q99575 1024 aaKnown RBP7.53□□□□□ -1.2
SYCP1-208ENST00000493377 GDPD2Q9HCC8 539 aa7.53□□□□□ -1.2
SYCP1-208ENST00000493377 IGHA2P01877 340 aa7.52□□□□□ -1.21
SYCP1-208ENST00000493377 PARD6AQ9NPB6 346 aa7.52□□□□□ -1.21
SYCP1-208ENST00000493377 CD320Q9NPF0 282 aa7.52□□□□□ -1.21
SYCP1-208ENST00000493377 SCNN1AP37088 669 aa7.51□□□□□ -1.21
SYCP1-208ENST00000493377 SOX4Q06945 474 aaPredicted RBP7.51□□□□□ -1.21
SYCP1-208ENST00000493377 EXOSC6Q5RKV6 272 aaKnown RBP7.51□□□□□ -1.21
SYCP1-208ENST00000493377 OGFOD3Q6PK18 319 aa7.51□□□□□ -1.21
SYCP1-208ENST00000493377 TREML1Q86YW5 311 aa7.51□□□□□ -1.21
SYCP1-208ENST00000493377 FBXO15Q8NCQ5 510 aaPredicted RBP7.51□□□□□ -1.21
SYCP1-208ENST00000493377 ALG2Q9H553 416 aa7.51□□□□□ -1.21
SYCP1-208ENST00000493377 LOC100289279A0A1B0GTE1 492 aa7.5□□□□□ -1.21
SYCP1-208ENST00000493377 USP17L3A6NCW0 530 aa7.5□□□□□ -1.21
SYCP1-208ENST00000493377 USP17L4A6NCW7 530 aa7.5□□□□□ -1.21
SYCP1-208ENST00000493377 USP17L2Q6R6M4 530 aa7.5□□□□□ -1.21
SYCP1-208ENST00000493377 PRR23BQ6ZRT6 265 aa7.5□□□□□ -1.21
SYCP1-208ENST00000493377 USP17L1Q7RTZ2 530 aa7.5□□□□□ -1.21
SYCP1-208ENST00000493377 PLD6Q8N2A8 252 aaKnown RBP7.5□□□□□ -1.21
SYCP1-208ENST00000493377 ZNF594Q96JF6 807 aaPredicted RBP7.5□□□□□ -1.21
SYCP1-208ENST00000493377 NFICP08651 508 aa7.49□□□□□ -1.21
SYCP1-208ENST00000493377 SEC13P55735 322 aa7.49□□□□□ -1.21
SYCP1-208ENST00000493377 CYP27C1Q4G0S4 372 aa7.49□□□□□ -1.21
SYCP1-208ENST00000493377 ANGEL2Q5VTE6 544 aaKnown RBP7.49□□□□□ -1.21
SYCP1-208ENST00000493377 USP26Q9BXU7 913 aa7.49□□□□□ -1.21
SYCP1-208ENST00000493377 TRIP4Q15650 581 aaPredicted RBP7.48□□□□□ -1.21
SYCP1-208ENST00000493377 MPZL3Q6UWV2 235 aa7.48□□□□□ -1.21
SYCP1-208ENST00000493377 CEP120Q8N960 986 aa7.48□□□□□ -1.21
SYCP1-208ENST00000493377 SEMA6CQ9H3T2 930 aa7.48□□□□□ -1.21
SYCP1-208ENST00000493377 GLI1P08151 1106 aa7.47□□□□□ -1.21
SYCP1-208ENST00000493377 TMEM253P0C7T8 217 aa7.47□□□□□ -1.21
SYCP1-208ENST00000493377 CD96P40200 585 aa7.47□□□□□ -1.21
SYCP1-208ENST00000493377 A0A0G2JLL6 359 aaPredicted RBP7.46□□□□□ -1.22
SYCP1-208ENST00000493377 DLGAP3O95886 979 aa7.46□□□□□ -1.22
SYCP1-208ENST00000493377 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.45□□□□□ -1.22
SYCP1-208ENST00000493377 MED14OSP0DP75 135 aa7.45□□□□□ -1.22
SYCP1-208ENST00000493377 RAB6AP20340 208 aa7.45□□□□□ -1.22
SYCP1-208ENST00000493377 AFMP43652 599 aa7.45□□□□□ -1.22
SYCP1-208ENST00000493377 NFKB2Q00653 900 aa7.45□□□□□ -1.22
SYCP1-208ENST00000493377 TTC39BQ5VTQ0 682 aaPredicted RBP7.45□□□□□ -1.22
SYCP1-208ENST00000493377 PRRT2Q7Z6L0 340 aaPredicted RBP7.45□□□□□ -1.22
SYCP1-208ENST00000493377 NCAPG2Q86XI2 1143 aa7.45□□□□□ -1.22
SYCP1-208ENST00000493377 C1GALT1Q9NS00 363 aa7.45□□□□□ -1.22
SYCP1-208ENST00000493377 MKRN1Q9UHC7 482 aaKnown RBP7.45□□□□□ -1.22
SYCP1-208ENST00000493377 ACTL7BQ9Y614 415 aa7.45□□□□□ -1.22
SYCP1-208ENST00000493377 TCAF2A6NFQ2 919 aa7.44□□□□□ -1.22
SYCP1-208ENST00000493377 UBAP1LF5GYI3 381 aa7.44□□□□□ -1.22
SYCP1-208ENST00000493377 NUAK1O60285 661 aa7.44□□□□□ -1.22
SYCP1-208ENST00000493377 ADH5P11766 374 aa7.44□□□□□ -1.22
SYCP1-208ENST00000493377 NFIXQ14938 502 aa7.44□□□□□ -1.22
SYCP1-208ENST00000493377 SEZ6L2Q6UXD5 910 aa7.44□□□□□ -1.22
SYCP1-208ENST00000493377 HRASLS5Q96KN8 279 aa7.44□□□□□ -1.22
SYCP1-208ENST00000493377 HINFPQ9BQA5 517 aa7.44□□□□□ -1.22
SYCP1-208ENST00000493377 ACSS3Q9H6R3 686 aa7.44□□□□□ -1.22
SYCP1-208ENST00000493377 SUV39H1O43463 412 aa7.43□□□□□ -1.22
SYCP1-208ENST00000493377 IFI16Q16666 785 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms