RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 PI4K2BQ8TCG2 481 aa11.13□□□□□ -0.63
VPS8-225ENST00000492449 PLCD4Q9BRC7 762 aa11.13□□□□□ -0.63
VPS8-225ENST00000492449 NEXMIFQ5QGS0 1516 aa11.13□□□□□ -0.63
VPS8-225ENST00000492449 LRRIQ3A6PVS8 624 aaPredicted RBP11.13□□□□□ -0.63
VPS8-225ENST00000492449 ADD1P35611 737 aaKnown RBP11.13□□□□□ -0.63
VPS8-225ENST00000492449 KIF4BQ2VIQ3 1234 aa11.13□□□□□ -0.63
VPS8-225ENST00000492449 ADCK5Q3MIX3 580 aa11.13□□□□□ -0.63
VPS8-225ENST00000492449 CCDC73Q6ZRK6 1079 aa11.13□□□□□ -0.63
VPS8-225ENST00000492449 MAGEC3Q8TD91 643 aa11.13□□□□□ -0.63
VPS8-225ENST00000492449 PAGR1Q9BTK6 254 aa11.13□□□□□ -0.63
VPS8-225ENST00000492449 TERF2IPQ9NYB0 399 aa11.13□□□□□ -0.63
VPS8-225ENST00000492449 CDC23Q9UJX2 597 aa11.13□□□□□ -0.63
VPS8-225ENST00000492449 NPHP4O75161 1426 aaPredicted RBP11.13□□□□□ -0.63
VPS8-225ENST00000492449 MROH1Q8NDA8 1641 aa11.13□□□□□ -0.63
VPS8-225ENST00000492449 FYB1O15117 783 aa11.13□□□□□ -0.63
VPS8-225ENST00000492449 PAX7P23759 505 aa11.13□□□□□ -0.63
VPS8-225ENST00000492449 ATP8B2P98198 1209 aa11.13□□□□□ -0.63
VPS8-225ENST00000492449 PLCB4Q15147 1175 aa11.13□□□□□ -0.63
VPS8-225ENST00000492449 ZC3H4Q9UPT8 1303 aaKnown RBP11.12□□□□□ -0.63
VPS8-225ENST00000492449 ZFYVE16Q7Z3T8 1539 aa11.12□□□□□ -0.63
VPS8-225ENST00000492449 STX10O60499 249 aa11.12□□□□□ -0.63
VPS8-225ENST00000492449 CCT5P48643 541 aa11.12□□□□□ -0.63
VPS8-225ENST00000492449 FANCCQ00597 558 aa11.12□□□□□ -0.63
VPS8-225ENST00000492449 NECTIN1Q15223 517 aa11.12□□□□□ -0.63
VPS8-225ENST00000492449 YTHDF3Q7Z739 585 aaKnown RBP11.12□□□□□ -0.63
VPS8-225ENST00000492449 ANKRD18AQ8IVF6 992 aa11.12□□□□□ -0.63
VPS8-225ENST00000492449 VSTM4Q8IW00 320 aa11.12□□□□□ -0.63
VPS8-225ENST00000492449 BORCS6Q96GS4 357 aa11.12□□□□□ -0.63
VPS8-225ENST00000492449 CALR3Q96L12 384 aaKnown RBP11.12□□□□□ -0.63
VPS8-225ENST00000492449 ETAA1Q9NY74 926 aa11.12□□□□□ -0.63
VPS8-225ENST00000492449 ODF2LQ9ULJ1 636 aa11.12□□□□□ -0.63
VPS8-225ENST00000492449 USP42Q9H9J4 1324 aaKnown RBP11.12□□□□□ -0.63
VPS8-225ENST00000492449 WDHD1O75717 1129 aaPredicted RBP11.12□□□□□ -0.63
VPS8-225ENST00000492449 CNTROBQ8N137 903 aa11.12□□□□□ -0.63
VPS8-225ENST00000492449 SUGCTQ9HAC7 445 aa11.12□□□□□ -0.63
VPS8-225ENST00000492449 SOS1Q07889 1333 aaPredicted RBP11.11□□□□□ -0.63
VPS8-225ENST00000492449 CACNA1FO60840 1977 aa11.11□□□□□ -0.63
VPS8-225ENST00000492449 CHGAP10645 457 aaKnown RBP11.11□□□□□ -0.63
VPS8-225ENST00000492449 IRAK1P51617 712 aa11.11□□□□□ -0.63
VPS8-225ENST00000492449 VSNL1P62760 191 aa11.11□□□□□ -0.63
VPS8-225ENST00000492449 IQCA1Q86XH1 822 aa11.11□□□□□ -0.63
VPS8-225ENST00000492449 ZNF483Q8TF39 744 aaPredicted RBP11.11□□□□□ -0.63
VPS8-225ENST00000492449 SH3GL3Q99963 347 aa11.11□□□□□ -0.63
VPS8-225ENST00000492449 GGNBP2Q9H3C7 697 aa11.11□□□□□ -0.63
VPS8-225ENST00000492449 TBX2Q13207 712 aaPredicted RBP11.11□□□□□ -0.63
VPS8-225ENST00000492449 HSD3B7Q9H2F3 369 aa11.11□□□□□ -0.63
VPS8-225ENST00000492449 KIAA1468Q9P260 1216 aa11.11□□□□□ -0.63
VPS8-225ENST00000492449 A6NNZ2 444 aa11.1□□□□□ -0.63
VPS8-225ENST00000492449 AMPHP49418 695 aa11.1□□□□□ -0.63
VPS8-225ENST00000492449 TUBB8Q3ZCM7 444 aa11.1□□□□□ -0.63
VPS8-225ENST00000492449 FMR1NBQ8N0W7 255 aaPredicted RBP11.1□□□□□ -0.63
VPS8-225ENST00000492449 RUFY2Q8WXA3 655 aa11.1□□□□□ -0.63
VPS8-225ENST00000492449 TEX13AQ9BXU3 409 aaPredicted RBP11.1□□□□□ -0.63
VPS8-225ENST00000492449 CAPN7Q9Y6W3 813 aa11.1□□□□□ -0.63
VPS8-225ENST00000492449 NEDD4P46934 1319 aa11.1□□□□□ -0.63
VPS8-225ENST00000492449 A0A1B0GUA9 196 aa11.1□□□□□ -0.63
VPS8-225ENST00000492449 SHTN1A0MZ66 631 aa11.1□□□□□ -0.63
VPS8-225ENST00000492449 PSMA5P28066 241 aa11.1□□□□□ -0.63
VPS8-225ENST00000492449 NLRP12P59046 1061 aa11.1□□□□□ -0.63
VPS8-225ENST00000492449 PPFIA1Q13136 1202 aa11.1□□□□□ -0.63
VPS8-225ENST00000492449 DPCR1Q3MIW9 517 aa11.1□□□□□ -0.63
VPS8-225ENST00000492449 B4GALNT4Q76KP1 1039 aa11.1□□□□□ -0.63
VPS8-225ENST00000492449 IGSF22Q8N9C0 903 aa11.1□□□□□ -0.63
VPS8-225ENST00000492449 GRIN2DO15399 1336 aa11.1□□□□□ -0.63
VPS8-225ENST00000492449 EIF3HO15372 352 aaKnown RBP eCLIP11.1□□□□□ -0.63
VPS8-225ENST00000492449 RAB11FIP3O75154 756 aa11.1□□□□□ -0.63
VPS8-225ENST00000492449 PHACTR2O75167 634 aa11.1□□□□□ -0.63
VPS8-225ENST00000492449 SMTNP53814 917 aa11.1□□□□□ -0.63
VPS8-225ENST00000492449 WWC2Q6AWC2 1192 aa11.1□□□□□ -0.63
VPS8-225ENST00000492449 TTC19Q6DKK2 380 aaPredicted RBP11.1□□□□□ -0.63
VPS8-225ENST00000492449 TLDC1Q6P9B6 456 aa11.1□□□□□ -0.63
VPS8-225ENST00000492449 CCDC12Q8WUD4 166 aaPredicted RBP11.1□□□□□ -0.63
VPS8-225ENST00000492449 SMARCC1Q92922 1105 aaPredicted RBP11.1□□□□□ -0.63
VPS8-225ENST00000492449 CD248Q9HCU0 757 aa11.1□□□□□ -0.63
VPS8-225ENST00000492449 HPCAL4Q9UM19 191 aa11.1□□□□□ -0.63
VPS8-225ENST00000492449 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.1□□□□□ -0.63
VPS8-225ENST00000492449 RASSF9O75901 435 aa11.09□□□□□ -0.63
VPS8-225ENST00000492449 ARHGAP25P42331 645 aa11.09□□□□□ -0.63
VPS8-225ENST00000492449 SLC8A3P57103 927 aa11.09□□□□□ -0.63
VPS8-225ENST00000492449 ZC3H12AQ5D1E8 599 aaKnown RBP11.09□□□□□ -0.63
VPS8-225ENST00000492449 AP1ARQ63HQ0 302 aa11.09□□□□□ -0.63
VPS8-225ENST00000492449 ARMC2Q8NEN0 867 aa11.09□□□□□ -0.63
VPS8-225ENST00000492449 BAG1Q99933 345 aaPredicted RBP11.09□□□□□ -0.63
VPS8-225ENST00000492449 KAT14Q9H8E8 782 aa11.09□□□□□ -0.63
VPS8-225ENST00000492449 FAM208AQ9UK61 1670 aaKnown RBP11.09□□□□□ -0.63
VPS8-225ENST00000492449 MCM3P25205 808 aa11.09□□□□□ -0.63
VPS8-225ENST00000492449 PXDNLA1KZ92 1463 aa11.08□□□□□ -0.64
VPS8-225ENST00000492449 MAP3K5Q99683 1374 aa11.08□□□□□ -0.64
VPS8-225ENST00000492449 PNMA6EA0A0J9YXQ4 647 aa11.08□□□□□ -0.64
VPS8-225ENST00000492449 A0A1W2PQ27 194 aa11.08□□□□□ -0.64
VPS8-225ENST00000492449 A0A1W2PQ64 194 aa11.08□□□□□ -0.64
VPS8-225ENST00000492449 A0A1W2PQD8 194 aa11.08□□□□□ -0.64
VPS8-225ENST00000492449 ZKSCAN1P17029 563 aaPredicted RBP11.08□□□□□ -0.64
VPS8-225ENST00000492449 PTH1RQ03431 593 aa11.08□□□□□ -0.64
VPS8-225ENST00000492449 WHAMMP3Q1A5X7 153 aa11.08□□□□□ -0.64
VPS8-225ENST00000492449 PRPF40BQ6NWY9 871 aaKnown RBP11.08□□□□□ -0.64
VPS8-225ENST00000492449 OTUD6BQ8N6M0 293 aa11.08□□□□□ -0.64
VPS8-225ENST00000492449 FAM76AQ8TAV0 307 aa11.08□□□□□ -0.64
VPS8-225ENST00000492449 SLC24A3Q9HC58 644 aa11.08□□□□□ -0.64
VPS8-225ENST00000492449 SNRKQ9NRH2 765 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms