RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 LARGE1O95461 756 aa11.39□□□□□ -0.59
RAB3GAP1-205ENST00000489858 STARD3NLO95772 234 aa11.39□□□□□ -0.59
RAB3GAP1-205ENST00000489858 F13A1P00488 732 aa11.39□□□□□ -0.59
RAB3GAP1-205ENST00000489858 RPS6KB1P23443 525 aa11.39□□□□□ -0.59
RAB3GAP1-205ENST00000489858 TCIRG1Q13488 830 aa11.39□□□□□ -0.59
RAB3GAP1-205ENST00000489858 TSGA10IPQ3SY00 556 aa11.39□□□□□ -0.59
RAB3GAP1-205ENST00000489858 ATG9AQ7Z3C6 839 aa11.39□□□□□ -0.59
RAB3GAP1-205ENST00000489858 KBTBD3Q8NAB2 608 aa11.39□□□□□ -0.59
RAB3GAP1-205ENST00000489858 DOT1LQ8TEK3 1739 aa11.39□□□□□ -0.59
RAB3GAP1-205ENST00000489858 TRIM44Q96DX7 344 aaPredicted RBP11.39□□□□□ -0.59
RAB3GAP1-205ENST00000489858 RBM27Q9P2N5 1060 aaKnown RBP11.39□□□□□ -0.59
RAB3GAP1-205ENST00000489858 SYT1P21579 422 aa11.38□□□□□ -0.59
RAB3GAP1-205ENST00000489858 GJB2P29033 226 aa11.38□□□□□ -0.59
RAB3GAP1-205ENST00000489858 PRSS12P56730 875 aa11.38□□□□□ -0.59
RAB3GAP1-205ENST00000489858 TRIM28Q13263 835 aaKnown RBP11.38□□□□□ -0.59
RAB3GAP1-205ENST00000489858 LRRFIP1Q32MZ4 808 aaKnown RBP11.38□□□□□ -0.59
RAB3GAP1-205ENST00000489858 MCMDC2Q4G0Z9 681 aa11.38□□□□□ -0.59
RAB3GAP1-205ENST00000489858 HSP90AB3PQ58FF7 597 aa11.38□□□□□ -0.59
RAB3GAP1-205ENST00000489858 USPL1Q5W0Q7 1092 aa11.38□□□□□ -0.59
RAB3GAP1-205ENST00000489858 LRSAM1Q6UWE0 723 aa11.38□□□□□ -0.59
RAB3GAP1-205ENST00000489858 ZNF589Q86UQ0 364 aaPredicted RBP11.38□□□□□ -0.59
RAB3GAP1-205ENST00000489858 DNAJC10Q8IXB1 793 aa11.38□□□□□ -0.59
RAB3GAP1-205ENST00000489858 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.38□□□□□ -0.59
RAB3GAP1-205ENST00000489858 EDC3Q96F86 508 aaKnown RBP11.38□□□□□ -0.59
RAB3GAP1-205ENST00000489858 NEUROD6Q96NK8 337 aa11.38□□□□□ -0.59
RAB3GAP1-205ENST00000489858 HELLSQ9NRZ9 838 aa11.38□□□□□ -0.59
RAB3GAP1-205ENST00000489858 PAG1Q9NWQ8 432 aa11.38□□□□□ -0.59
RAB3GAP1-205ENST00000489858 BTG4Q9NY30 223 aa11.38□□□□□ -0.59
RAB3GAP1-205ENST00000489858 ABCC12Q96J65 1359 aa11.38□□□□□ -0.59
RAB3GAP1-205ENST00000489858 PCCAP05165 728 aaPredicted RBP11.37□□□□□ -0.59
RAB3GAP1-205ENST00000489858 PDCP20941 246 aa11.37□□□□□ -0.59
RAB3GAP1-205ENST00000489858 DDX46Q7L014 1031 aaKnown RBP11.37□□□□□ -0.59
RAB3GAP1-205ENST00000489858 CHAMP1Q96JM3 812 aa11.37□□□□□ -0.59
RAB3GAP1-205ENST00000489858 PPP1R9BQ96SB3 815 aa11.37□□□□□ -0.59
RAB3GAP1-205ENST00000489858 PLA2G12BQ9BX93 195 aa11.37□□□□□ -0.59
RAB3GAP1-205ENST00000489858 TMEM63CQ9P1W3 806 aa11.37□□□□□ -0.59
RAB3GAP1-205ENST00000489858 AKAP2Q9Y2D5 859 aa11.37□□□□□ -0.59
RAB3GAP1-205ENST00000489858 MAP3K15Q6ZN16 1313 aa11.36□□□□□ -0.59
RAB3GAP1-205ENST00000489858 CDHR2Q9BYE9 1310 aa11.36□□□□□ -0.59
RAB3GAP1-205ENST00000489858 BCL9O00512 1426 aa11.36□□□□□ -0.59
RAB3GAP1-205ENST00000489858 NRAPQ86VF7 1730 aa11.36□□□□□ -0.59
RAB3GAP1-205ENST00000489858 GOLIM4O00461 696 aa11.36□□□□□ -0.59
RAB3GAP1-205ENST00000489858 IFIT1P09914 478 aaKnown RBP11.36□□□□□ -0.59
RAB3GAP1-205ENST00000489858 PPP4CP60510 307 aa11.36□□□□□ -0.59
RAB3GAP1-205ENST00000489858 ME3Q16798 604 aa11.36□□□□□ -0.59
RAB3GAP1-205ENST00000489858 CCDC57Q2TAC2 916 aa11.36□□□□□ -0.59
RAB3GAP1-205ENST00000489858 TAF7LQ5H9L4 462 aa11.36□□□□□ -0.59
RAB3GAP1-205ENST00000489858 USP48Q86UV5 1035 aa11.36□□□□□ -0.59
RAB3GAP1-205ENST00000489858 PIGBQ92521 554 aa11.36□□□□□ -0.59
RAB3GAP1-205ENST00000489858 CEP126Q9P2H0 1117 aa11.36□□□□□ -0.59
RAB3GAP1-205ENST00000489858 TPCN1Q9ULQ1 816 aa11.36□□□□□ -0.59
RAB3GAP1-205ENST00000489858 MTMR6Q9Y217 621 aa11.36□□□□□ -0.59
RAB3GAP1-205ENST00000489858 ZNF330Q9Y3S2 320 aaPredicted RBP11.36□□□□□ -0.59
RAB3GAP1-205ENST00000489858 MYH3P11055 1940 aa11.36□□□□□ -0.59
RAB3GAP1-205ENST00000489858 RIC1Q4ADV7 1423 aa11.35□□□□□ -0.59
RAB3GAP1-205ENST00000489858 LRP5O75197 1615 aa11.35□□□□□ -0.59
RAB3GAP1-205ENST00000489858 A0A1B0GUL7 405 aa11.35□□□□□ -0.59
RAB3GAP1-205ENST00000489858 SYCE3A1L190 88 aa11.35□□□□□ -0.59
RAB3GAP1-205ENST00000489858 VPS37CA5D8V6 355 aaPredicted RBP11.35□□□□□ -0.59
RAB3GAP1-205ENST00000489858 ST3GAL1Q11201 340 aa11.35□□□□□ -0.59
RAB3GAP1-205ENST00000489858 ZMYM1Q5SVZ6 1142 aa11.35□□□□□ -0.59
RAB3GAP1-205ENST00000489858 NEK1Q96PY6 1258 aa11.35□□□□□ -0.59
RAB3GAP1-205ENST00000489858 DSCC1Q9BVC3 393 aa11.35□□□□□ -0.59
RAB3GAP1-205ENST00000489858 TSPY26PQ9H489 355 aa11.35□□□□□ -0.59
RAB3GAP1-205ENST00000489858 FAM198AQ9UFP1 575 aa11.35□□□□□ -0.59
RAB3GAP1-205ENST00000489858 ASAP1Q9ULH1 1129 aa11.35□□□□□ -0.59
RAB3GAP1-205ENST00000489858 CNPY2Q9Y2B0 182 aa11.35□□□□□ -0.59
RAB3GAP1-205ENST00000489858 LAMA4Q16363 1823 aa11.35□□□□□ -0.59
RAB3GAP1-205ENST00000489858 CICQ96RK0 1608 aaPredicted RBP11.35□□□□□ -0.59
RAB3GAP1-205ENST00000489858 LETM1O95202 739 aaPredicted RBP11.34□□□□□ -0.59
RAB3GAP1-205ENST00000489858 HMGB1P09429 215 aaKnown RBP11.34□□□□□ -0.59
RAB3GAP1-205ENST00000489858 PRIM1P49642 420 aaKnown RBP11.34□□□□□ -0.59
RAB3GAP1-205ENST00000489858 UBE2HP62256 183 aa11.34□□□□□ -0.59
RAB3GAP1-205ENST00000489858 FOXD4L6Q3SYB3 417 aaPredicted RBP11.34□□□□□ -0.59
RAB3GAP1-205ENST00000489858 LRRC24Q50LG9 513 aa11.34□□□□□ -0.59
RAB3GAP1-205ENST00000489858 TTC39AQ5SRH9 613 aa11.34□□□□□ -0.59
RAB3GAP1-205ENST00000489858 CCDC183Q5T5S1 534 aa11.34□□□□□ -0.59
RAB3GAP1-205ENST00000489858 GORABQ5T7V8 394 aa11.34□□□□□ -0.59
RAB3GAP1-205ENST00000489858 FOXD4L3Q6VB84 417 aaPredicted RBP11.34□□□□□ -0.59
RAB3GAP1-205ENST00000489858 CCDC129Q6ZRS4 1044 aa11.34□□□□□ -0.59
RAB3GAP1-205ENST00000489858 NECAB1Q8N987 351 aa11.34□□□□□ -0.59
RAB3GAP1-205ENST00000489858 ZBTB38Q8NAP3 1195 aaPredicted RBP11.34□□□□□ -0.59
RAB3GAP1-205ENST00000489858 ZNF594Q96JF6 807 aaPredicted RBP11.34□□□□□ -0.59
RAB3GAP1-205ENST00000489858 RBSNQ9H1K0 784 aa11.34□□□□□ -0.59
RAB3GAP1-205ENST00000489858 RRAGDQ9NQL2 400 aaPredicted RBP11.34□□□□□ -0.59
RAB3GAP1-205ENST00000489858 WDR70Q9NW82 654 aa11.34□□□□□ -0.59
RAB3GAP1-205ENST00000489858 NSFL1CQ9UNZ2 370 aaKnown RBP11.34□□□□□ -0.59
RAB3GAP1-205ENST00000489858 CCDC9Q9Y3X0 531 aaKnown RBP11.34□□□□□ -0.59
RAB3GAP1-205ENST00000489858 NDUFB9Q9Y6M9 179 aa11.34□□□□□ -0.59
RAB3GAP1-205ENST00000489858 MYH7P12883 1935 aa11.34□□□□□ -0.59
RAB3GAP1-205ENST00000489858 ARAP2Q8WZ64 1704 aa11.34□□□□□ -0.59
RAB3GAP1-205ENST00000489858 RREB1Q92766 1687 aa11.33□□□□□ -0.6
RAB3GAP1-205ENST00000489858 PHLPP1O60346 1717 aa11.33□□□□□ -0.6
RAB3GAP1-205ENST00000489858 RNF113AO15541 343 aaKnown RBP11.33□□□□□ -0.6
RAB3GAP1-205ENST00000489858 GADD45BO75293 160 aaPredicted RBP11.33□□□□□ -0.6
RAB3GAP1-205ENST00000489858 HSP90B1P14625 803 aaKnown RBP11.33□□□□□ -0.6
RAB3GAP1-205ENST00000489858 IFIT5Q13325 482 aaKnown RBP11.33□□□□□ -0.6
RAB3GAP1-205ENST00000489858 TOB2Q14106 344 aaPredicted RBP11.33□□□□□ -0.6
RAB3GAP1-205ENST00000489858 CCDC158Q5M9N0 1113 aa11.33□□□□□ -0.6
RAB3GAP1-205ENST00000489858 GIGYF2Q6Y7W6 1299 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms