RNA–Protein interactions for RNA: ENST00000489274.1

NINJ1-204, Transcript of ninjurin 1, humanhuman

TSL 2

Gene NINJ1, Length 2,026 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-204ENST00000489274 LY75O60449 1722 aa17.26■□□□□ 0.35
NINJ1-204ENST00000489274 MBD3O95983 291 aa17.26■□□□□ 0.35
NINJ1-204ENST00000489274 MAP3K12Q12852 859 aa17.26■□□□□ 0.35
NINJ1-204ENST00000489274 UBE4AQ14139 1066 aa17.26■□□□□ 0.35
NINJ1-204ENST00000489274 TMEM87AQ8NBN3 555 aa17.26■□□□□ 0.35
NINJ1-204ENST00000489274 GPT2Q8TD30 523 aa17.26■□□□□ 0.35
NINJ1-204ENST00000489274 PFKFB2O60825 505 aa17.25■□□□□ 0.35
NINJ1-204ENST00000489274 BCAMP50895 628 aa17.25■□□□□ 0.35
NINJ1-204ENST00000489274 NBPF5PQ86XG9 351 aaPredicted RBP17.25■□□□□ 0.35
NINJ1-204ENST00000489274 BRF1Q92994 677 aa17.25■□□□□ 0.35
NINJ1-204ENST00000489274 NLRP3Q96P20 1036 aa17.25■□□□□ 0.35
NINJ1-204ENST00000489274 WWC3Q9ULE0 1092 aa17.25■□□□□ 0.35
NINJ1-204ENST00000489274 MYH7P12883 1935 aa17.25■□□□□ 0.35
NINJ1-204ENST00000489274 MRE11P49959 708 aa17.25■□□□□ 0.35
NINJ1-204ENST00000489274 FGD1P98174 961 aa17.25■□□□□ 0.35
NINJ1-204ENST00000489274 TRAPPC3LQ5T215 181 aa17.25■□□□□ 0.35
NINJ1-204ENST00000489274 LARP1BQ659C4 914 aaKnown RBP17.25■□□□□ 0.35
NINJ1-204ENST00000489274 LLPHQ9BRT6 129 aaKnown RBP17.25■□□□□ 0.35
NINJ1-204ENST00000489274 QTRT2Q9H974 415 aaKnown RBP17.24■□□□□ 0.35
NINJ1-204ENST00000489274 MINPP1Q9UNW1 487 aa17.24■□□□□ 0.35
NINJ1-204ENST00000489274 COL24A1Q17RW2 1714 aa17.24■□□□□ 0.35
NINJ1-204ENST00000489274 ZNF804BA4D1E1 1349 aa17.24■□□□□ 0.35
NINJ1-204ENST00000489274 SBF2Q86WG5 1849 aa17.23■□□□□ 0.35
NINJ1-204ENST00000489274 ZNF213O14771 459 aa17.23■□□□□ 0.35
NINJ1-204ENST00000489274 EVCP57679 992 aa17.23■□□□□ 0.35
NINJ1-204ENST00000489274 ALX1Q15699 326 aa17.23■□□□□ 0.35
NINJ1-204ENST00000489274 AMIGO3Q86WK7 504 aa17.23■□□□□ 0.35
NINJ1-204ENST00000489274 CHMP4CQ96CF2 233 aa17.23■□□□□ 0.35
NINJ1-204ENST00000489274 STRBPQ96SI9 672 aaKnown RBP17.23■□□□□ 0.35
NINJ1-204ENST00000489274 ADRA2BP18089 450 aa17.23■□□□□ 0.35
NINJ1-204ENST00000489274 NCLP19338 710 aaKnown RBP17.23■□□□□ 0.35
NINJ1-204ENST00000489274 RFC4P35249 363 aa17.23■□□□□ 0.35
NINJ1-204ENST00000489274 ZNF445P59923 1031 aa17.23■□□□□ 0.35
NINJ1-204ENST00000489274 RPS8P62241 208 aaKnown RBP17.23■□□□□ 0.35
NINJ1-204ENST00000489274 STK3Q13188 491 aa17.23■□□□□ 0.35
NINJ1-204ENST00000489274 ZNF274Q96GC6 653 aaPredicted RBP17.23■□□□□ 0.35
NINJ1-204ENST00000489274 LRRC2Q9BYS8 371 aa17.23■□□□□ 0.35
NINJ1-204ENST00000489274 XRCC6P12956 609 aaKnown RBP eCLIP17.22■□□□□ 0.35
NINJ1-204ENST00000489274 CAVIN1Q6NZI2 390 aaKnown RBP17.22■□□□□ 0.35
NINJ1-204ENST00000489274 USP48Q86UV5 1035 aa17.22■□□□□ 0.35
NINJ1-204ENST00000489274 CELF1Q92879 486 aaKnown RBP17.22■□□□□ 0.35
NINJ1-204ENST00000489274 GNL3LQ9NVN8 582 aaKnown RBP17.22■□□□□ 0.35
NINJ1-204ENST00000489274 COL4A1P02462 1669 aa17.22■□□□□ 0.35
NINJ1-204ENST00000489274 WDR19Q8NEZ3 1342 aa17.22■□□□□ 0.35
NINJ1-204ENST00000489274 TAF1LQ8IZX4 1826 aa17.22■□□□□ 0.35
NINJ1-204ENST00000489274 C4BP0C0L5 1744 aa17.21■□□□□ 0.35
NINJ1-204ENST00000489274 SCRN1Q12765 414 aa17.21■□□□□ 0.35
NINJ1-204ENST00000489274 FAM196AQ6ZSG2 479 aa17.21■□□□□ 0.35
NINJ1-204ENST00000489274 MB21D2Q8IYB1 491 aaPredicted RBP17.21■□□□□ 0.35
NINJ1-204ENST00000489274 NCOA7Q8NI08 942 aa17.21■□□□□ 0.35
NINJ1-204ENST00000489274 SMARCC2Q8TAQ2 1214 aa17.21■□□□□ 0.35
NINJ1-204ENST00000489274 ZMYM6O95789 1325 aa17.21■□□□□ 0.35
NINJ1-204ENST00000489274 MCM5P33992 734 aa17.21■□□□□ 0.35
NINJ1-204ENST00000489274 HAND2P61296 217 aa17.21■□□□□ 0.35
NINJ1-204ENST00000489274 GAS2L3Q86XJ1 694 aa17.21■□□□□ 0.35
NINJ1-204ENST00000489274 MAGEB6Q8N7X4 407 aa17.21■□□□□ 0.35
NINJ1-204ENST00000489274 AIDAQ96BJ3 306 aa17.21■□□□□ 0.35
NINJ1-204ENST00000489274 LAMA4Q16363 1823 aa17.2■□□□□ 0.34
NINJ1-204ENST00000489274 PATL2C9JE40 543 aaKnown RBP17.2■□□□□ 0.34
NINJ1-204ENST00000489274 APOBRQ0VD83 1088 aa17.2■□□□□ 0.34
NINJ1-204ENST00000489274 ZSCAN23Q3MJ62 389 aa17.2■□□□□ 0.34
NINJ1-204ENST00000489274 ANKRD2Q9GZV1 360 aa17.2■□□□□ 0.34
NINJ1-204ENST00000489274 GRPEL1Q9HAV7 217 aa17.2■□□□□ 0.34
NINJ1-204ENST00000489274 LRRC4BQ9NT99 713 aa17.2■□□□□ 0.34
NINJ1-204ENST00000489274 VPS37CA5D8V6 355 aaPredicted RBP17.2■□□□□ 0.34
NINJ1-204ENST00000489274 TM4SF1P30408 202 aa17.2■□□□□ 0.34
NINJ1-204ENST00000489274 CSPP1Q1MSJ5 1256 aa17.2■□□□□ 0.34
NINJ1-204ENST00000489274 CAVIN4Q5BKX8 364 aa17.2■□□□□ 0.34
NINJ1-204ENST00000489274 DOCK2Q92608 1830 aa17.19■□□□□ 0.34
NINJ1-204ENST00000489274 PDIA3P30101 505 aaKnown RBP17.19■□□□□ 0.34
NINJ1-204ENST00000489274 FOXD4L6Q3SYB3 417 aaPredicted RBP17.19■□□□□ 0.34
NINJ1-204ENST00000489274 SLC27A3Q5K4L6 730 aa17.19■□□□□ 0.34
NINJ1-204ENST00000489274 FOXD4L3Q6VB84 417 aaPredicted RBP17.19■□□□□ 0.34
NINJ1-204ENST00000489274 FBXO41Q8TF61 875 aa17.19■□□□□ 0.34
NINJ1-204ENST00000489274 NSFL1CQ9UNZ2 370 aaKnown RBP17.19■□□□□ 0.34
NINJ1-204ENST00000489274 CNPY2Q9Y2B0 182 aa17.19■□□□□ 0.34
NINJ1-204ENST00000489274 PNPLA7Q6ZV29 1317 aa17.19■□□□□ 0.34
NINJ1-204ENST00000489274 ZBTB22O15209 634 aa17.18■□□□□ 0.34
NINJ1-204ENST00000489274 DTNBO60941 627 aa17.18■□□□□ 0.34
NINJ1-204ENST00000489274 APPP05067 770 aa17.18■□□□□ 0.34
NINJ1-204ENST00000489274 GNAT2P19087 354 aa17.18■□□□□ 0.34
NINJ1-204ENST00000489274 FBXO33Q7Z6M2 555 aa17.18■□□□□ 0.34
NINJ1-204ENST00000489274 RALYLQ86SE5 291 aaKnown RBP17.18■□□□□ 0.34
NINJ1-204ENST00000489274 FAM84BQ96KN1 310 aaPredicted RBP17.18■□□□□ 0.34
NINJ1-204ENST00000489274 CARMIL3Q8ND23 1372 aa17.18■□□□□ 0.34
NINJ1-204ENST00000489274 SEMA3EO15041 775 aa17.18■□□□□ 0.34
NINJ1-204ENST00000489274 PRC1O43663 620 aa17.18■□□□□ 0.34
NINJ1-204ENST00000489274 JAK2O60674 1132 aa17.18■□□□□ 0.34
NINJ1-204ENST00000489274 GYG1P46976 350 aa17.18■□□□□ 0.34
NINJ1-204ENST00000489274 HMGN5P82970 282 aaKnown RBP17.18■□□□□ 0.34
NINJ1-204ENST00000489274 CHST3Q7LGC8 479 aa17.18■□□□□ 0.34
NINJ1-204ENST00000489274 NSUN7Q8NE18 718 aaKnown RBP17.18■□□□□ 0.34
NINJ1-204ENST00000489274 NBPF3Q9H094 633 aa17.18■□□□□ 0.34
NINJ1-204ENST00000489274 GDPD2Q9HCC8 539 aa17.18■□□□□ 0.34
NINJ1-204ENST00000489274 LRP2BPQ9P2M1 347 aa17.18■□□□□ 0.34
NINJ1-204ENST00000489274 DENND2AQ9ULE3 1009 aa17.18■□□□□ 0.34
NINJ1-204ENST00000489274 MBD4O95243 580 aa17.17■□□□□ 0.34
NINJ1-204ENST00000489274 TRDNQ13061 729 aa17.17■□□□□ 0.34
NINJ1-204ENST00000489274 NFIXQ14938 502 aa17.17■□□□□ 0.34
NINJ1-204ENST00000489274 CDC37L1Q7L3B6 337 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms