RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 HRH3Q9Y5N1 445 aa8.06□□□□□ -1.12
CDHR3-213ENST00000488386 KIF24Q5T7B8 1368 aa8.06□□□□□ -1.12
CDHR3-213ENST00000488386 NCAPD2Q15021 1401 aa8.05□□□□□ -1.12
CDHR3-213ENST00000488386 TTLL8A6PVC2 850 aa8.05□□□□□ -1.12
CDHR3-213ENST00000488386 ZBTB7BO15156 539 aaPredicted RBP8.05□□□□□ -1.12
CDHR3-213ENST00000488386 DKK1O94907 266 aa8.05□□□□□ -1.12
CDHR3-213ENST00000488386 GDF10P55107 478 aa8.05□□□□□ -1.12
CDHR3-213ENST00000488386 CRTC2Q53ET0 693 aaPredicted RBP8.05□□□□□ -1.12
CDHR3-213ENST00000488386 ZNF594Q96JF6 807 aaPredicted RBP8.05□□□□□ -1.12
CDHR3-213ENST00000488386 SERPINA10Q9UK55 444 aa8.05□□□□□ -1.12
CDHR3-213ENST00000488386 CCNL1Q9UK58 526 aaPredicted RBP8.05□□□□□ -1.12
CDHR3-213ENST00000488386 KNSTRNQ9Y448 316 aa8.05□□□□□ -1.12
CDHR3-213ENST00000488386 FIGNL2A6NMB9 653 aa8.04□□□□□ -1.12
CDHR3-213ENST00000488386 ZNF787Q6DD87 383 aa8.04□□□□□ -1.12
CDHR3-213ENST00000488386 CNKSR1Q969H4 720 aa8.04□□□□□ -1.12
CDHR3-213ENST00000488386 KIFC2Q96AC6 838 aa8.04□□□□□ -1.12
CDHR3-213ENST00000488386 C5P01031 1676 aa8.04□□□□□ -1.12
CDHR3-213ENST00000488386 PNPLA7Q6ZV29 1317 aa8.03□□□□□ -1.12
CDHR3-213ENST00000488386 TAF1LQ8IZX4 1826 aa8.03□□□□□ -1.12
CDHR3-213ENST00000488386 PALLDQ8WX93 1383 aa8.03□□□□□ -1.12
CDHR3-213ENST00000488386 INHAP05111 366 aa8.03□□□□□ -1.12
CDHR3-213ENST00000488386 PHKG2P15735 406 aa8.03□□□□□ -1.12
CDHR3-213ENST00000488386 RASA1P20936 1047 aa8.03□□□□□ -1.12
CDHR3-213ENST00000488386 AMIGO3Q86WK7 504 aa8.03□□□□□ -1.12
CDHR3-213ENST00000488386 TRIM50Q86XT4 487 aa8.03□□□□□ -1.12
CDHR3-213ENST00000488386 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.03□□□□□ -1.12
CDHR3-213ENST00000488386 TPCN2Q8NHX9 752 aa8.03□□□□□ -1.12
CDHR3-213ENST00000488386 PIGBQ92521 554 aa8.03□□□□□ -1.12
CDHR3-213ENST00000488386 XAGE2Q96GT9 111 aa8.03□□□□□ -1.12
CDHR3-213ENST00000488386 ESYT1Q9BSJ8 1104 aa8.03□□□□□ -1.12
CDHR3-213ENST00000488386 FHDC1Q9C0D6 1143 aaPredicted RBP8.03□□□□□ -1.12
CDHR3-213ENST00000488386 DNAAF2Q9NVR5 837 aaKnown RBP8.03□□□□□ -1.12
CDHR3-213ENST00000488386 TFCP2L1Q9NZI6 479 aa8.03□□□□□ -1.12
CDHR3-213ENST00000488386 IGSF1Q8N6C5 1336 aa8.03□□□□□ -1.12
CDHR3-213ENST00000488386 USP17L15C9J2P7 530 aa8.02□□□□□ -1.13
CDHR3-213ENST00000488386 USP17L10C9JJH3 530 aa8.02□□□□□ -1.13
CDHR3-213ENST00000488386 USP17L13C9JLJ4 530 aa8.02□□□□□ -1.13
CDHR3-213ENST00000488386 USP17L12C9JPN9 530 aa8.02□□□□□ -1.13
CDHR3-213ENST00000488386 USP17L11C9JVI0 530 aa8.02□□□□□ -1.13
CDHR3-213ENST00000488386 USP17L21D6R901 530 aa8.02□□□□□ -1.13
CDHR3-213ENST00000488386 USP17L18D6R9N7 530 aa8.02□□□□□ -1.13
CDHR3-213ENST00000488386 USP17L22D6RA61 530 aa8.02□□□□□ -1.13
CDHR3-213ENST00000488386 USP17L17D6RBQ6 530 aa8.02□□□□□ -1.13
CDHR3-213ENST00000488386 USP17L19D6RCP7 530 aa8.02□□□□□ -1.13
CDHR3-213ENST00000488386 USP17L20D6RJB6 530 aa8.02□□□□□ -1.13
CDHR3-213ENST00000488386 USP17L24Q0WX57 530 aa8.02□□□□□ -1.13
CDHR3-213ENST00000488386 PTK7Q13308 1070 aa8.02□□□□□ -1.13
CDHR3-213ENST00000488386 MSL1Q68DK7 614 aa8.02□□□□□ -1.13
CDHR3-213ENST00000488386 SULT6B1Q6IMI4 303 aa8.02□□□□□ -1.13
CDHR3-213ENST00000488386 ARID3AQ99856 593 aa8.02□□□□□ -1.13
CDHR3-213ENST00000488386 VRTNQ9H8Y1 702 aa8.02□□□□□ -1.13
CDHR3-213ENST00000488386 ZNF358Q9NW07 568 aa8.02□□□□□ -1.13
CDHR3-213ENST00000488386 SERTAD1Q9UHV2 236 aa8.02□□□□□ -1.13
CDHR3-213ENST00000488386 ASAP1Q9ULH1 1129 aa8.02□□□□□ -1.13
CDHR3-213ENST00000488386 SPG7Q9UQ90 795 aa8.02□□□□□ -1.13
CDHR3-213ENST00000488386 QSER1Q2KHR3 1735 aa8.01□□□□□ -1.13
CDHR3-213ENST00000488386 MAN1A2O60476 641 aa8.01□□□□□ -1.13
CDHR3-213ENST00000488386 HMOX1P09601 288 aa8.01□□□□□ -1.13
CDHR3-213ENST00000488386 IL13P35225 146 aa8.01□□□□□ -1.13
CDHR3-213ENST00000488386 MTHFSP49914 203 aa8.01□□□□□ -1.13
CDHR3-213ENST00000488386 RNF144AP50876 292 aaPredicted RBP8.01□□□□□ -1.13
CDHR3-213ENST00000488386 ATP1A2P50993 1020 aa8.01□□□□□ -1.13
CDHR3-213ENST00000488386 CENPCQ03188 943 aa8.01□□□□□ -1.13
CDHR3-213ENST00000488386 SLC27A3Q5K4L6 730 aa8.01□□□□□ -1.13
CDHR3-213ENST00000488386 CCDC102BQ68D86 513 aa8.01□□□□□ -1.13
CDHR3-213ENST00000488386 COL23A1Q86Y22 540 aaPredicted RBP8.01□□□□□ -1.13
CDHR3-213ENST00000488386 IFNL2Q8IZJ0 200 aa8.01□□□□□ -1.13
CDHR3-213ENST00000488386 SIX5Q8N196 739 aa8.01□□□□□ -1.13
CDHR3-213ENST00000488386 NLRP3Q96P20 1036 aa8.01□□□□□ -1.13
CDHR3-213ENST00000488386 MTFR1LQ9H019 292 aa8.01□□□□□ -1.13
CDHR3-213ENST00000488386 USP3Q9Y6I4 520 aa8.01□□□□□ -1.13
CDHR3-213ENST00000488386 C4BP0C0L5 1744 aa8□□□□□ -1.13
CDHR3-213ENST00000488386 SFI1A8K8P3 1242 aa8□□□□□ -1.13
CDHR3-213ENST00000488386 TLR1Q15399 786 aa8□□□□□ -1.13
CDHR3-213ENST00000488386 ZNF530Q6P9A1 599 aaPredicted RBP8□□□□□ -1.13
CDHR3-213ENST00000488386 LARGE2Q8N3Y3 721 aa8□□□□□ -1.13
CDHR3-213ENST00000488386 LINC00116Q8NCU8 138 aa8□□□□□ -1.13
CDHR3-213ENST00000488386 SYT17Q9BSW7 474 aa8□□□□□ -1.13
CDHR3-213ENST00000488386 GRIP2Q9C0E4 1043 aa8□□□□□ -1.13
CDHR3-213ENST00000488386 TMOD3Q9NYL9 352 aa8□□□□□ -1.13
CDHR3-213ENST00000488386 KDM6AO15550 1401 aaPredicted RBP8□□□□□ -1.13
CDHR3-213ENST00000488386 VIRMAQ69YN4 1812 aaKnown RBP7.99□□□□□ -1.13
CDHR3-213ENST00000488386 FAM196BA6NMK8 535 aa7.99□□□□□ -1.13
CDHR3-213ENST00000488386 RHOQP17081 205 aa7.99□□□□□ -1.13
CDHR3-213ENST00000488386 GPC1P35052 558 aa7.99□□□□□ -1.13
CDHR3-213ENST00000488386 ITPK1Q13572 414 aa7.99□□□□□ -1.13
CDHR3-213ENST00000488386 PRICKLE2Q7Z3G6 844 aa7.99□□□□□ -1.13
CDHR3-213ENST00000488386 ARXQ96QS3 562 aa7.99□□□□□ -1.13
CDHR3-213ENST00000488386 ATG3Q9NT62 314 aa7.99□□□□□ -1.13
CDHR3-213ENST00000488386 ZMIZ1Q9ULJ6 1067 aa7.99□□□□□ -1.13
CDHR3-213ENST00000488386 UBR3Q6ZT12 1888 aa7.98□□□□□ -1.13
CDHR3-213ENST00000488386 LOC102724428A0A0B4J2F2 783 aa7.98□□□□□ -1.13
CDHR3-213ENST00000488386 EPHA4P54764 986 aa7.98□□□□□ -1.13
CDHR3-213ENST00000488386 SIK1P57059 783 aa7.98□□□□□ -1.13
CDHR3-213ENST00000488386 DPYDQ12882 1025 aa7.98□□□□□ -1.13
CDHR3-213ENST00000488386 PLEKHO1Q53GL0 409 aaPredicted RBP7.98□□□□□ -1.13
CDHR3-213ENST00000488386 LYSMD3Q7Z3D4 306 aa7.98□□□□□ -1.13
CDHR3-213ENST00000488386 NLGN2Q8NFZ4 835 aa7.98□□□□□ -1.13
CDHR3-213ENST00000488386 PBXIP1Q96AQ6 731 aa7.98□□□□□ -1.13
CDHR3-213ENST00000488386 SLC4A9Q96Q91 983 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms