RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 GRPEL1Q9HAV7 217 aa24.13■■□□□ 1.45
HPS3-206ENST00000486530 PIH1D3Q9NQM4 214 aaKnown RBP24.13■■□□□ 1.45
HPS3-206ENST00000486530 FOXP2O15409 715 aa24.13■■□□□ 1.45
HPS3-206ENST00000486530 GPAA1O43292 621 aa24.13■■□□□ 1.45
HPS3-206ENST00000486530 IMMTQ16891 758 aaKnown RBP24.13■■□□□ 1.45
HPS3-206ENST00000486530 ERFEQ4G0M1 354 aa24.13■■□□□ 1.45
HPS3-206ENST00000486530 BRPF3Q9ULD4 1205 aa24.13■■□□□ 1.45
HPS3-206ENST00000486530 ZNF445P59923 1031 aa24.12■■□□□ 1.45
HPS3-206ENST00000486530 FGD1P98174 961 aa24.12■■□□□ 1.45
HPS3-206ENST00000486530 EXOSC10Q01780 885 aaKnown RBP24.12■■□□□ 1.45
HPS3-206ENST00000486530 SF3B3Q15393 1217 aaKnown RBP24.12■■□□□ 1.45
HPS3-206ENST00000486530 SLC9C2Q5TAH2 1124 aa24.12■■□□□ 1.45
HPS3-206ENST00000486530 BICDL1Q6ZP65 573 aa24.12■■□□□ 1.45
HPS3-206ENST00000486530 AGXT2Q9BYV1 514 aa24.12■■□□□ 1.45
HPS3-206ENST00000486530 SLC27A3Q5K4L6 730 aa24.11■■□□□ 1.45
HPS3-206ENST00000486530 TRAPPC3LQ5T215 181 aa24.11■■□□□ 1.45
HPS3-206ENST00000486530 POTEAQ6S8J7 498 aa24.11■■□□□ 1.45
HPS3-206ENST00000486530 SPATA5Q8NB90 893 aa24.11■■□□□ 1.45
HPS3-206ENST00000486530 BRF1Q92994 677 aa24.11■■□□□ 1.45
HPS3-206ENST00000486530 COL4A1P02462 1669 aa24.11■■□□□ 1.45
HPS3-206ENST00000486530 IDH1O75874 414 aaKnown RBP24.11■■□□□ 1.45
HPS3-206ENST00000486530 STK3Q13188 491 aa24.11■■□□□ 1.45
HPS3-206ENST00000486530 ZSCAN23Q3MJ62 389 aa24.11■■□□□ 1.45
HPS3-206ENST00000486530 SLC10A5Q5PT55 438 aa24.11■■□□□ 1.45
HPS3-206ENST00000486530 LARP1BQ659C4 914 aaKnown RBP24.11■■□□□ 1.45
HPS3-206ENST00000486530 CHRNDQ07001 517 aa24.1■■□□□ 1.45
HPS3-206ENST00000486530 FOXD4L6Q3SYB3 417 aaPredicted RBP24.1■■□□□ 1.45
HPS3-206ENST00000486530 TTLL5Q6EMB2 1281 aa24.1■■□□□ 1.45
HPS3-206ENST00000486530 FOXD4L3Q6VB84 417 aaPredicted RBP24.1■■□□□ 1.45
HPS3-206ENST00000486530 GAS2L3Q86XJ1 694 aa24.1■■□□□ 1.45
HPS3-206ENST00000486530 SETDB2Q96T68 719 aa24.1■■□□□ 1.45
HPS3-206ENST00000486530 NYXQ9GZU5 481 aa24.1■■□□□ 1.45
HPS3-206ENST00000486530 A0A0G2JLW4 131 aa24.09■■□□□ 1.45
HPS3-206ENST00000486530 VPS37CA5D8V6 355 aaPredicted RBP24.09■■□□□ 1.45
HPS3-206ENST00000486530 FGAP02671 866 aa24.09■■□□□ 1.45
HPS3-206ENST00000486530 PDE6AP16499 860 aa24.09■■□□□ 1.45
HPS3-206ENST00000486530 C4AP0C0L4 1744 aa24.09■■□□□ 1.45
HPS3-206ENST00000486530 RASGRF1Q13972 1273 aa24.09■■□□□ 1.45
HPS3-206ENST00000486530 ANKRD18AQ8IVF6 992 aa24.09■■□□□ 1.45
HPS3-206ENST00000486530 ZNF532Q9HCE3 1301 aa24.08■■□□□ 1.45
HPS3-206ENST00000486530 PFKFB2O60825 505 aa24.08■■□□□ 1.45
HPS3-206ENST00000486530 RFC4P35249 363 aa24.08■■□□□ 1.45
HPS3-206ENST00000486530 C3orf67Q6ZVT6 689 aa24.08■■□□□ 1.45
HPS3-206ENST00000486530 USP48Q86UV5 1035 aa24.08■■□□□ 1.45
HPS3-206ENST00000486530 FBXL16Q8N461 479 aa24.08■■□□□ 1.45
HPS3-206ENST00000486530 LRRC2Q9BYS8 371 aa24.08■■□□□ 1.45
HPS3-206ENST00000486530 TAF1P21675 1872 aa24.08■■□□□ 1.44
HPS3-206ENST00000486530 PHF14O94880 888 aa24.07■■□□□ 1.44
HPS3-206ENST00000486530 PROM2Q8N271 834 aa24.07■■□□□ 1.44
HPS3-206ENST00000486530 TCRBV5S4A2TA0A5A2 114 aa24.07■■□□□ 1.44
HPS3-206ENST00000486530 ADRA2BP18089 450 aa24.07■■□□□ 1.44
HPS3-206ENST00000486530 GTF2E1P29083 439 aaPredicted RBP24.07■■□□□ 1.44
HPS3-206ENST00000486530 MAP3K12Q12852 859 aa24.07■■□□□ 1.44
HPS3-206ENST00000486530 CSPP1Q1MSJ5 1256 aa24.07■■□□□ 1.44
HPS3-206ENST00000486530 LLPHQ9BRT6 129 aaKnown RBP24.07■■□□□ 1.44
HPS3-206ENST00000486530 WWC3Q9ULE0 1092 aa24.07■■□□□ 1.44
HPS3-206ENST00000486530 CNPY2Q9Y2B0 182 aa24.07■■□□□ 1.44
HPS3-206ENST00000486530 SNAP23O00161 211 aa24.06■■□□□ 1.44
HPS3-206ENST00000486530 GDPD2Q9HCC8 539 aa24.06■■□□□ 1.44
HPS3-206ENST00000486530 BSDC1Q9NW68 430 aaPredicted RBP24.06■■□□□ 1.44
HPS3-206ENST00000486530 SYAP1Q96A49 352 aaPredicted RBP24.05■■□□□ 1.44
HPS3-206ENST00000486530 CHMP4CQ96CF2 233 aa24.05■■□□□ 1.44
HPS3-206ENST00000486530 TMEM63CQ9P1W3 806 aa24.05■■□□□ 1.44
HPS3-206ENST00000486530 RBM27Q9P2N5 1060 aaKnown RBP24.05■■□□□ 1.44
HPS3-206ENST00000486530 NSFL1CQ9UNZ2 370 aaKnown RBP24.05■■□□□ 1.44
HPS3-206ENST00000486530 EP400Q96L91 3159 aa24.05■■□□□ 1.44
HPS3-206ENST00000486530 ZNF213O14771 459 aa24.04■■□□□ 1.44
HPS3-206ENST00000486530 DTNBO60941 627 aa24.04■■□□□ 1.44
HPS3-206ENST00000486530 SCRN1Q12765 414 aa24.04■■□□□ 1.44
HPS3-206ENST00000486530 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.04■■□□□ 1.44
HPS3-206ENST00000486530 HAND2P61296 217 aa24.04■■□□□ 1.44
HPS3-206ENST00000486530 APOBRQ0VD83 1088 aa24.04■■□□□ 1.44
HPS3-206ENST00000486530 CDC37L1Q7L3B6 337 aa24.04■■□□□ 1.44
HPS3-206ENST00000486530 NBPF5PQ86XG9 351 aaPredicted RBP24.04■■□□□ 1.44
HPS3-206ENST00000486530 WDR19Q8NEZ3 1342 aa24.03■■□□□ 1.44
HPS3-206ENST00000486530 CHD4Q14839 1912 aa24.03■■□□□ 1.44
HPS3-206ENST00000486530 BCAMP50895 628 aa24.03■■□□□ 1.44
HPS3-206ENST00000486530 NCOA7Q8NI08 942 aa24.03■■□□□ 1.44
HPS3-206ENST00000486530 SMARCC2Q8TAQ2 1214 aa24.03■■□□□ 1.44
HPS3-206ENST00000486530 AIDAQ96BJ3 306 aa24.03■■□□□ 1.44
HPS3-206ENST00000486530 ZNF274Q96GC6 653 aaPredicted RBP24.03■■□□□ 1.44
HPS3-206ENST00000486530 ZMYM6O95789 1325 aa24.03■■□□□ 1.44
HPS3-206ENST00000486530 UBE4AQ14139 1066 aa24.02■■□□□ 1.44
HPS3-206ENST00000486530 TXNRD1Q16881 649 aa24.02■■□□□ 1.44
HPS3-206ENST00000486530 TPTE2Q6XPS3 522 aa24.02■■□□□ 1.44
HPS3-206ENST00000486530 MB21D2Q8IYB1 491 aaPredicted RBP24.02■■□□□ 1.44
HPS3-206ENST00000486530 PANK2Q9BZ23 570 aa24.02■■□□□ 1.44
HPS3-206ENST00000486530 JAK2O60674 1132 aa24.02■■□□□ 1.44
HPS3-206ENST00000486530 GADD45BO75293 160 aaPredicted RBP24.02■■□□□ 1.44
HPS3-206ENST00000486530 MCM5P33992 734 aa24.02■■□□□ 1.44
HPS3-206ENST00000486530 EVCP57679 992 aa24.02■■□□□ 1.44
HPS3-206ENST00000486530 ZNF804BA4D1E1 1349 aa24.01■■□□□ 1.43
HPS3-206ENST00000486530 UBE2HP62256 183 aa24.01■■□□□ 1.43
HPS3-206ENST00000486530 HMGN5P82970 282 aaKnown RBP24.01■■□□□ 1.43
HPS3-206ENST00000486530 DNM1Q05193 864 aaKnown RBP24.01■■□□□ 1.43
HPS3-206ENST00000486530 RALYLQ86SE5 291 aaKnown RBP24.01■■□□□ 1.43
HPS3-206ENST00000486530 MAGEB6Q8N7X4 407 aa24.01■■□□□ 1.43
HPS3-206ENST00000486530 STRBPQ96SI9 672 aaKnown RBP24.01■■□□□ 1.43
HPS3-206ENST00000486530 FIBPO43427 364 aa24■■□□□ 1.43
HPS3-206ENST00000486530 NFIXQ14938 502 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms