RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 ZNF396Q96N95 335 aaPredicted RBP20.52■□□□□ 0.88
TNXB-205ENST00000486148 TMEM51Q9NW97 253 aa20.52■□□□□ 0.88
TNXB-205ENST00000486148 A0A087WWV3 80 aa20.51■□□□□ 0.87
TNXB-205ENST00000486148 FGAP02671 866 aa20.51■□□□□ 0.87
TNXB-205ENST00000486148 ZAP70P43403 619 aa20.51■□□□□ 0.87
TNXB-205ENST00000486148 EVCP57679 992 aa20.51■□□□□ 0.87
TNXB-205ENST00000486148 ENGASEQ8NFI3 743 aa20.51■□□□□ 0.87
TNXB-205ENST00000486148 PUS7LQ9H0K6 701 aaKnown RBP20.51■□□□□ 0.87
TNXB-205ENST00000486148 AKAP2Q9Y2D5 859 aa20.51■□□□□ 0.87
TNXB-205ENST00000486148 OTUD7BQ6GQQ9 843 aa20.5■□□□□ 0.87
TNXB-205ENST00000486148 FBXL16Q8N461 479 aa20.5■□□□□ 0.87
TNXB-205ENST00000486148 CARD10Q9BWT7 1032 aa20.5■□□□□ 0.87
TNXB-205ENST00000486148 STRN4Q9NRL3 753 aa20.5■□□□□ 0.87
TNXB-205ENST00000486148 ME1P48163 572 aa20.5■□□□□ 0.87
TNXB-205ENST00000486148 CCDC73Q6ZRK6 1079 aa20.5■□□□□ 0.87
TNXB-205ENST00000486148 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.5■□□□□ 0.87
TNXB-205ENST00000486148 SYNE4Q8N205 404 aa20.5■□□□□ 0.87
TNXB-205ENST00000486148 IMMTQ16891 758 aaKnown RBP20.5■□□□□ 0.87
TNXB-205ENST00000486148 ATL3Q6DD88 541 aa20.5■□□□□ 0.87
TNXB-205ENST00000486148 CTNNA3Q9UI47 895 aa20.5■□□□□ 0.87
TNXB-205ENST00000486148 TOGARAM1Q9Y4F4 1720 aa20.49■□□□□ 0.87
TNXB-205ENST00000486148 CTAGE5O15320 804 aa20.49■□□□□ 0.87
TNXB-205ENST00000486148 CAVIN2O95810 425 aa20.49■□□□□ 0.87
TNXB-205ENST00000486148 PCCAP05165 728 aaPredicted RBP20.49■□□□□ 0.87
TNXB-205ENST00000486148 ZSCAN25Q6NSZ9 544 aa20.49■□□□□ 0.87
TNXB-205ENST00000486148 FSIP1Q8NA03 581 aa20.49■□□□□ 0.87
TNXB-205ENST00000486148 ZFYP08048 801 aaPredicted RBP20.49■□□□□ 0.87
TNXB-205ENST00000486148 U2AF2P26368 475 aaKnown RBP eCLIP20.49■□□□□ 0.87
TNXB-205ENST00000486148 FAM160A1Q05DH4 1040 aa20.49■□□□□ 0.87
TNXB-205ENST00000486148 TRIM28Q13263 835 aaKnown RBP20.49■□□□□ 0.87
TNXB-205ENST00000486148 CCDC144BQ3MJ40 725 aa20.49■□□□□ 0.87
TNXB-205ENST00000486148 TAF7LQ5H9L4 462 aa20.49■□□□□ 0.87
TNXB-205ENST00000486148 RAB11FIP4Q86YS3 637 aa20.49■□□□□ 0.87
TNXB-205ENST00000486148 DNAJC10Q8IXB1 793 aa20.49■□□□□ 0.87
TNXB-205ENST00000486148 CCDC144CPQ8IYA2 1237 aa20.49■□□□□ 0.87
TNXB-205ENST00000486148 MB21D2Q8IYB1 491 aaPredicted RBP20.49■□□□□ 0.87
TNXB-205ENST00000486148 PDCL2Q8N4E4 241 aa20.49■□□□□ 0.87
TNXB-205ENST00000486148 CLIP2Q9UDT6 1046 aa20.49■□□□□ 0.87
TNXB-205ENST00000486148 FBXO3Q9UK99 471 aa20.49■□□□□ 0.87
TNXB-205ENST00000486148 PRC1O43663 620 aa20.48■□□□□ 0.87
TNXB-205ENST00000486148 CSF1RP07333 972 aa20.48■□□□□ 0.87
TNXB-205ENST00000486148 STX1AQ16623 288 aa20.48■□□□□ 0.87
TNXB-205ENST00000486148 LRRFIP1Q32MZ4 808 aaKnown RBP20.48■□□□□ 0.87
TNXB-205ENST00000486148 ERCC4Q92889 916 aaPredicted RBP20.48■□□□□ 0.87
TNXB-205ENST00000486148 XIRP1Q702N8 1843 aaKnown RBP20.48■□□□□ 0.87
TNXB-205ENST00000486148 KINO60870 393 aaKnown RBP20.48■□□□□ 0.87
TNXB-205ENST00000486148 ANTXR2P58335 489 aa20.48■□□□□ 0.87
TNXB-205ENST00000486148 IFIT5Q13325 482 aaKnown RBP20.48■□□□□ 0.87
TNXB-205ENST00000486148 APPBP2Q92624 585 aa20.48■□□□□ 0.87
TNXB-205ENST00000486148 TMOD3Q9NYL9 352 aa20.48■□□□□ 0.87
TNXB-205ENST00000486148 ASAP1Q9ULH1 1129 aa20.48■□□□□ 0.87
TNXB-205ENST00000486148 PCDHA7Q9UN72 937 aa20.48■□□□□ 0.87
TNXB-205ENST00000486148 HPS5Q9UPZ3 1129 aa20.48■□□□□ 0.87
TNXB-205ENST00000486148 PLA2G12BQ9BX93 195 aa20.47■□□□□ 0.87
TNXB-205ENST00000486148 KLF18A0A0U1RQI7 1052 aa20.47■□□□□ 0.87
TNXB-205ENST00000486148 GOLGA6L19H0YKK7 550 aa20.47■□□□□ 0.87
TNXB-205ENST00000486148 ZBTB38Q8NAP3 1195 aaPredicted RBP20.47■□□□□ 0.87
TNXB-205ENST00000486148 RIC1Q4ADV7 1423 aa20.47■□□□□ 0.87
TNXB-205ENST00000486148 KIF6Q6ZMV9 814 aa20.46■□□□□ 0.87
TNXB-205ENST00000486148 CACTINQ8WUQ7 758 aaKnown RBP20.46■□□□□ 0.87
TNXB-205ENST00000486148 GOLGA8BA8MQT2 603 aa20.46■□□□□ 0.87
TNXB-205ENST00000486148 RIOK3O14730 519 aaKnown RBP20.46■□□□□ 0.87
TNXB-205ENST00000486148 GPAA1O43292 621 aa20.46■□□□□ 0.87
TNXB-205ENST00000486148 HSPA2P54652 639 aa20.46■□□□□ 0.87
TNXB-205ENST00000486148 GJB4Q9NTQ9 266 aa20.46■□□□□ 0.87
TNXB-205ENST00000486148 RTEL1Q9NZ71 1219 aa20.46■□□□□ 0.87
TNXB-205ENST00000486148 SARM1Q6SZW1 724 aa20.45■□□□□ 0.86
TNXB-205ENST00000486148 CHMP4CQ96CF2 233 aa20.45■□□□□ 0.86
TNXB-205ENST00000486148 CLIC4Q9Y696 253 aa20.45■□□□□ 0.86
TNXB-205ENST00000486148 SOS2Q07890 1332 aaPredicted RBP20.45■□□□□ 0.86
TNXB-205ENST00000486148 POLR3DP05423 398 aaPredicted RBP20.45■□□□□ 0.86
TNXB-205ENST00000486148 CDC25BP30305 580 aa20.45■□□□□ 0.86
TNXB-205ENST00000486148 MCAMP43121 646 aa20.45■□□□□ 0.86
TNXB-205ENST00000486148 DHX40Q8IX18 779 aaKnown RBP20.45■□□□□ 0.86
TNXB-205ENST00000486148 FMR1NBQ8N0W7 255 aaPredicted RBP20.45■□□□□ 0.86
TNXB-205ENST00000486148 C8orf76Q96K31 380 aa20.45■□□□□ 0.86
TNXB-205ENST00000486148 HLFQ16534 295 aa20.44■□□□□ 0.86
TNXB-205ENST00000486148 NCOA7Q8NI08 942 aa20.44■□□□□ 0.86
TNXB-205ENST00000486148 PIGBQ92521 554 aa20.44■□□□□ 0.86
TNXB-205ENST00000486148 MRPS27Q92552 414 aaKnown RBP20.44■□□□□ 0.86
TNXB-205ENST00000486148 RIPOR2Q9Y4F9 1068 aa20.44■□□□□ 0.86
TNXB-205ENST00000486148 A0A1B0GVL5 298 aa20.44■□□□□ 0.86
TNXB-205ENST00000486148 GPTP24298 496 aa20.44■□□□□ 0.86
TNXB-205ENST00000486148 METTL24Q5JXM2 366 aa20.44■□□□□ 0.86
TNXB-205ENST00000486148 LINC00301Q8NCQ3 95 aa20.44■□□□□ 0.86
TNXB-205ENST00000486148 ANKRD7Q92527 254 aa20.44■□□□□ 0.86
TNXB-205ENST00000486148 ORC3Q9UBD5 711 aaPredicted RBP20.44■□□□□ 0.86
TNXB-205ENST00000486148 DENND2AQ9ULE3 1009 aa20.44■□□□□ 0.86
TNXB-205ENST00000486148 CHAF1AQ13111 956 aaPredicted RBP20.43■□□□□ 0.86
TNXB-205ENST00000486148 ADALQ6DHV7 355 aa20.43■□□□□ 0.86
TNXB-205ENST00000486148 FBXO18Q8NFZ0 1043 aa20.43■□□□□ 0.86
TNXB-205ENST00000486148 NKX2-3Q8TAU0 364 aa20.43■□□□□ 0.86
TNXB-205ENST00000486148 NBPF3Q9H094 633 aa20.43■□□□□ 0.86
TNXB-205ENST00000486148 GREM2Q9H772 168 aa20.43■□□□□ 0.86
TNXB-205ENST00000486148 DDX60Q8IY21 1712 aaKnown RBP20.43■□□□□ 0.86
TNXB-205ENST00000486148 ZNF213O14771 459 aa20.43■□□□□ 0.86
TNXB-205ENST00000486148 EVA1CP58658 441 aa20.43■□□□□ 0.86
TNXB-205ENST00000486148 FBXW7Q969H0 707 aa20.43■□□□□ 0.86
TNXB-205ENST00000486148 BCL11BQ9C0K0 894 aaPredicted RBP20.43■□□□□ 0.86
TNXB-205ENST00000486148 ANO10Q9NW15 660 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms