RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 EDN3P14138 238 aa9.09□□□□□ -0.95
SCAF11-207ENST00000484275 USP5P45974 858 aa9.09□□□□□ -0.95
SCAF11-207ENST00000484275 NFIAQ12857 509 aa9.09□□□□□ -0.95
SCAF11-207ENST00000484275 ECM1Q16610 540 aa9.09□□□□□ -0.95
SCAF11-207ENST00000484275 ZDHHC13Q8IUH4 622 aa9.09□□□□□ -0.95
SCAF11-207ENST00000484275 FAM20CQ8IXL6 584 aa9.09□□□□□ -0.95
SCAF11-207ENST00000484275 BHLHE41Q9C0J9 482 aaPredicted RBP9.09□□□□□ -0.95
SCAF11-207ENST00000484275 RNF208Q9H0X6 261 aa9.09□□□□□ -0.95
SCAF11-207ENST00000484275 METTL12A8MUP2 240 aa9.08□□□□□ -0.96
SCAF11-207ENST00000484275 POLR3DP05423 398 aaPredicted RBP9.08□□□□□ -0.96
SCAF11-207ENST00000484275 IKBKEQ14164 716 aa9.08□□□□□ -0.96
SCAF11-207ENST00000484275 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.08□□□□□ -0.96
SCAF11-207ENST00000484275 RUSC1Q9BVN2 902 aa9.08□□□□□ -0.96
SCAF11-207ENST00000484275 ZFYVE28Q9HCC9 887 aa9.08□□□□□ -0.96
SCAF11-207ENST00000484275 PCMTD2Q9NV79 361 aa9.08□□□□□ -0.96
SCAF11-207ENST00000484275 MTMR7Q9Y216 660 aa9.08□□□□□ -0.96
SCAF11-207ENST00000484275 KRTAP9-6A0A140TA67 174 aa9.07□□□□□ -0.96
SCAF11-207ENST00000484275 GSC2O15499 205 aa9.07□□□□□ -0.96
SCAF11-207ENST00000484275 DLGAP3O95886 979 aa9.07□□□□□ -0.96
SCAF11-207ENST00000484275 BMP3P12645 472 aa9.07□□□□□ -0.96
SCAF11-207ENST00000484275 RNF43Q68DV7 783 aa9.07□□□□□ -0.96
SCAF11-207ENST00000484275 ANKRD34AQ69YU3 496 aa9.07□□□□□ -0.96
SCAF11-207ENST00000484275 ASAP3Q8TDY4 903 aa9.07□□□□□ -0.96
SCAF11-207ENST00000484275 AMOTL2Q9Y2J4 779 aa9.07□□□□□ -0.96
SCAF11-207ENST00000484275 MEGF11A6BM72 1044 aa9.06□□□□□ -0.96
SCAF11-207ENST00000484275 C14orf37Q86TY3 774 aa9.06□□□□□ -0.96
SCAF11-207ENST00000484275 LOC100289279A0A1B0GTE1 492 aa9.05□□□□□ -0.96
SCAF11-207ENST00000484275 ICMTO60725 284 aa9.05□□□□□ -0.96
SCAF11-207ENST00000484275 ESRRAP11474 423 aaPredicted RBP9.05□□□□□ -0.96
SCAF11-207ENST00000484275 SERPINB4P48594 390 aa9.05□□□□□ -0.96
SCAF11-207ENST00000484275 ARL4DP49703 201 aa9.05□□□□□ -0.96
SCAF11-207ENST00000484275 BEND4Q6ZU67 534 aa9.05□□□□□ -0.96
SCAF11-207ENST00000484275 CLEC10AQ8IUN9 316 aa9.05□□□□□ -0.96
SCAF11-207ENST00000484275 FAM83CQ9BQN1 747 aa9.05□□□□□ -0.96
SCAF11-207ENST00000484275 TMPRSS13Q9BYE2 586 aa9.05□□□□□ -0.96
SCAF11-207ENST00000484275 PRR19A6NJB7 356 aa9.04□□□□□ -0.96
SCAF11-207ENST00000484275 KIAA1324LA8MWY0 1029 aaPredicted RBP9.04□□□□□ -0.96
SCAF11-207ENST00000484275 SART1O43290 800 aaKnown RBP9.04□□□□□ -0.96
SCAF11-207ENST00000484275 FDX2Q6P4F2 183 aa9.04□□□□□ -0.96
SCAF11-207ENST00000484275 DBNDD2Q9BQY9 259 aa9.04□□□□□ -0.96
SCAF11-207ENST00000484275 KCNF1Q9H3M0 494 aa9.04□□□□□ -0.96
SCAF11-207ENST00000484275 USTQ9Y2C2 406 aa9.04□□□□□ -0.96
SCAF11-207ENST00000484275 USPL1Q5W0Q7 1092 aa9.03□□□□□ -0.96
SCAF11-207ENST00000484275 USP26Q9BXU7 913 aa9.03□□□□□ -0.96
SCAF11-207ENST00000484275 SOX17Q9H6I2 414 aaPredicted RBP9.03□□□□□ -0.96
SCAF11-207ENST00000484275 EGFL7Q9UHF1 273 aa9.03□□□□□ -0.96
SCAF11-207ENST00000484275 A0A1W2PP55 124 aa9.02□□□□□ -0.97
SCAF11-207ENST00000484275 H3BRB1 525 aa9.02□□□□□ -0.97
SCAF11-207ENST00000484275 COBLO75128 1261 aa9.02□□□□□ -0.97
SCAF11-207ENST00000484275 ADAMTS4O75173 837 aa9.02□□□□□ -0.97
SCAF11-207ENST00000484275 TIAF1O95411 115 aa9.02□□□□□ -0.97
SCAF11-207ENST00000484275 SGO2Q562F6 1265 aa9.02□□□□□ -0.97
SCAF11-207ENST00000484275 TCF12Q99081 682 aa9.02□□□□□ -0.97
SCAF11-207ENST00000484275 NRSN2Q9GZP1 204 aa9.02□□□□□ -0.97
SCAF11-207ENST00000484275 TUT1Q9H6E5 874 aaKnown RBP9.02□□□□□ -0.97
SCAF11-207ENST00000484275 GRIA4P48058 902 aa9.01□□□□□ -0.97
SCAF11-207ENST00000484275 ARHGAP4P98171 946 aa9.01□□□□□ -0.97
SCAF11-207ENST00000484275 NUTM2GQ5VZR2 741 aa9.01□□□□□ -0.97
SCAF11-207ENST00000484275 CCNJLQ8IV13 435 aa9.01□□□□□ -0.97
SCAF11-207ENST00000484275 GALNT12Q8IXK2 581 aa9.01□□□□□ -0.97
SCAF11-207ENST00000484275 SMG8Q8ND04 991 aaKnown RBP9.01□□□□□ -0.97
SCAF11-207ENST00000484275 SHKBP1Q8TBC3 707 aa9.01□□□□□ -0.97
SCAF11-207ENST00000484275 HIF3AQ9Y2N7 669 aa9.01□□□□□ -0.97
SCAF11-207ENST00000484275 DRD2P14416 443 aa9□□□□□ -0.97
SCAF11-207ENST00000484275 SPINK2P20155 84 aa9□□□□□ -0.97
SCAF11-207ENST00000484275 MAP4P27816 1152 aaKnown RBP9□□□□□ -0.97
SCAF11-207ENST00000484275 GSTM4Q03013 218 aa9□□□□□ -0.97
SCAF11-207ENST00000484275 ZNF423Q2M1K9 1284 aa9□□□□□ -0.97
SCAF11-207ENST00000484275 SPRED3Q2MJR0 410 aa9□□□□□ -0.97
SCAF11-207ENST00000484275 C12orf50Q8NA57 414 aaPredicted RBP9□□□□□ -0.97
SCAF11-207ENST00000484275 SUGCTQ9HAC7 445 aa9□□□□□ -0.97
SCAF11-207ENST00000484275 A0A096LPE4 126 aa8.99□□□□□ -0.97
SCAF11-207ENST00000484275 A0A1W2PPZ6 126 aa8.99□□□□□ -0.97
SCAF11-207ENST00000484275 BRPF3Q9ULD4 1205 aa8.99□□□□□ -0.97
SCAF11-207ENST00000484275 GAS2O43903 313 aaKnown RBP8.98□□□□□ -0.97
SCAF11-207ENST00000484275 CTSBP07858 339 aa8.98□□□□□ -0.97
SCAF11-207ENST00000484275 PCDH1Q08174 1060 aa8.98□□□□□ -0.97
SCAF11-207ENST00000484275 GLYCTKQ8IVS8 523 aa8.98□□□□□ -0.97
SCAF11-207ENST00000484275 SHISA5Q8N114 240 aa8.98□□□□□ -0.97
SCAF11-207ENST00000484275 MFSD14AQ96MC6 490 aa8.98□□□□□ -0.97
SCAF11-207ENST00000484275 LIN7BQ9HAP6 207 aa8.98□□□□□ -0.97
SCAF11-207ENST00000484275 ORC1Q13415 861 aa8.97□□□□□ -0.97
SCAF11-207ENST00000484275 EXOSC6Q5RKV6 272 aaKnown RBP8.97□□□□□ -0.97
SCAF11-207ENST00000484275 CYP4F12Q9HCS2 524 aa8.97□□□□□ -0.97
SCAF11-207ENST00000484275 WDR64B1ANS9 1081 aa8.96□□□□□ -0.98
SCAF11-207ENST00000484275 IGHA2P01877 340 aa8.96□□□□□ -0.98
SCAF11-207ENST00000484275 HOXA10P31260 410 aaPredicted RBP8.96□□□□□ -0.98
SCAF11-207ENST00000484275 CDPF1Q6NVV7 123 aa8.96□□□□□ -0.98
SCAF11-207ENST00000484275 C2CD4AQ8NCU7 369 aaPredicted RBP8.96□□□□□ -0.98
SCAF11-207ENST00000484275 FAM129BQ96TA1 746 aa8.96□□□□□ -0.98
SCAF11-207ENST00000484275 KRTAP4-12Q9BQ66 201 aa8.96□□□□□ -0.98
SCAF11-207ENST00000484275 CLEC4MQ9H2X3 399 aaPredicted RBP8.96□□□□□ -0.98
SCAF11-207ENST00000484275 OAS3Q9Y6K5 1087 aaKnown RBP8.96□□□□□ -0.98
SCAF11-207ENST00000484275 MCTP1Q6DN14 999 aa8.95□□□□□ -0.98
SCAF11-207ENST00000484275 B4GALNT3Q6L9W6 998 aa8.95□□□□□ -0.98
SCAF11-207ENST00000484275 INTS5Q6P9B9 1019 aaKnown RBP8.95□□□□□ -0.98
SCAF11-207ENST00000484275 TXNDC2Q86VQ3 553 aa8.95□□□□□ -0.98
SCAF11-207ENST00000484275 DTX1Q86Y01 620 aa8.95□□□□□ -0.98
SCAF11-207ENST00000484275 ECEL1O95672 775 aa8.94□□□□□ -0.98
SCAF11-207ENST00000484275 F13BP05160 661 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms