RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 GTF2IP78347 998 aa8.35□□□□□ -1.07
SEMA3D-204ENST00000484038 CLN3Q13286 438 aa8.35□□□□□ -1.07
SEMA3D-204ENST00000484038 HSP90AB2PQ58FF8 381 aa8.35□□□□□ -1.07
SEMA3D-204ENST00000484038 PRICKLE2Q7Z3G6 844 aa8.35□□□□□ -1.07
SEMA3D-204ENST00000484038 SMARCC1Q92922 1105 aaPredicted RBP8.35□□□□□ -1.07
SEMA3D-204ENST00000484038 CNKSR1Q969H4 720 aa8.35□□□□□ -1.07
SEMA3D-204ENST00000484038 INSRP06213 1382 aa8.35□□□□□ -1.07
SEMA3D-204ENST00000484038 FLT4P35916 1363 aa8.35□□□□□ -1.07
SEMA3D-204ENST00000484038 PKD1L3Q7Z443 1732 aa8.35□□□□□ -1.07
SEMA3D-204ENST00000484038 PALM3A6NDB9 673 aaPredicted RBP8.34□□□□□ -1.07
SEMA3D-204ENST00000484038 FYB1O15117 783 aa8.34□□□□□ -1.07
SEMA3D-204ENST00000484038 GTF2E1P29083 439 aaPredicted RBP8.34□□□□□ -1.07
SEMA3D-204ENST00000484038 LYSMD3Q7Z3D4 306 aa8.34□□□□□ -1.07
SEMA3D-204ENST00000484038 IL2RAP01589 272 aa8.34□□□□□ -1.08
SEMA3D-204ENST00000484038 SSFA2P28290 1259 aa8.34□□□□□ -1.08
SEMA3D-204ENST00000484038 VEGFBP49765 207 aa8.34□□□□□ -1.08
SEMA3D-204ENST00000484038 GDF10P55107 478 aa8.34□□□□□ -1.08
SEMA3D-204ENST00000484038 TRIM50Q86XT4 487 aa8.34□□□□□ -1.08
SEMA3D-204ENST00000484038 LINC00116Q8NCU8 138 aa8.34□□□□□ -1.08
SEMA3D-204ENST00000484038 PIGBQ92521 554 aa8.34□□□□□ -1.08
SEMA3D-204ENST00000484038 ESYT1Q9BSJ8 1104 aa8.34□□□□□ -1.08
SEMA3D-204ENST00000484038 PPP1R12CQ9BZL4 782 aa8.34□□□□□ -1.08
SEMA3D-204ENST00000484038 ETNK1Q9HBU6 452 aa8.34□□□□□ -1.08
SEMA3D-204ENST00000484038 CICQ96RK0 1608 aaPredicted RBP8.33□□□□□ -1.08
SEMA3D-204ENST00000484038 LOC102724428A0A0B4J2F2 783 aa8.33□□□□□ -1.08
SEMA3D-204ENST00000484038 PPM1GO15355 546 aaPredicted RBP8.33□□□□□ -1.08
SEMA3D-204ENST00000484038 RNF144AP50876 292 aaPredicted RBP8.33□□□□□ -1.08
SEMA3D-204ENST00000484038 SIK1P57059 783 aa8.33□□□□□ -1.08
SEMA3D-204ENST00000484038 PLEKHM2Q8IWE5 1019 aa8.33□□□□□ -1.08
SEMA3D-204ENST00000484038 NXF1Q9UBU9 619 aaKnown RBP8.33□□□□□ -1.08
SEMA3D-204ENST00000484038 MKRN1Q9UHC7 482 aaKnown RBP8.33□□□□□ -1.08
SEMA3D-204ENST00000484038 MAP2P11137 1827 aaKnown RBP8.32□□□□□ -1.08
SEMA3D-204ENST00000484038 MMP10P09238 476 aa8.32□□□□□ -1.08
SEMA3D-204ENST00000484038 RHOQP17081 205 aa8.32□□□□□ -1.08
SEMA3D-204ENST00000484038 LMOD1P29536 600 aaPredicted RBP8.32□□□□□ -1.08
SEMA3D-204ENST00000484038 GPC1P35052 558 aa8.32□□□□□ -1.08
SEMA3D-204ENST00000484038 ATP1A2P50993 1020 aa8.32□□□□□ -1.08
SEMA3D-204ENST00000484038 PTSQ03393 145 aa8.32□□□□□ -1.08
SEMA3D-204ENST00000484038 TLR1Q15399 786 aa8.32□□□□□ -1.08
SEMA3D-204ENST00000484038 TMOD3Q9NYL9 352 aa8.32□□□□□ -1.08
SEMA3D-204ENST00000484038 SPG7Q9UQ90 795 aa8.32□□□□□ -1.08
SEMA3D-204ENST00000484038 MAFBQ9Y5Q3 323 aaPredicted RBP8.32□□□□□ -1.08
SEMA3D-204ENST00000484038 PXDNLA1KZ92 1463 aa8.32□□□□□ -1.08
SEMA3D-204ENST00000484038 N4BP2Q86UW6 1770 aaPredicted RBP8.32□□□□□ -1.08
SEMA3D-204ENST00000484038 KIF24Q5T7B8 1368 aa8.31□□□□□ -1.08
SEMA3D-204ENST00000484038 TMF1P82094 1093 aa8.31□□□□□ -1.08
SEMA3D-204ENST00000484038 TMEM214Q6NUQ4 689 aaKnown RBP8.31□□□□□ -1.08
SEMA3D-204ENST00000484038 ZSCAN10Q96SZ4 725 aaPredicted RBP8.31□□□□□ -1.08
SEMA3D-204ENST00000484038 SERTAD1Q9UHV2 236 aa8.31□□□□□ -1.08
SEMA3D-204ENST00000484038 ASAP1Q9ULH1 1129 aa8.31□□□□□ -1.08
SEMA3D-204ENST00000484038 BCS1LQ9Y276 419 aa8.31□□□□□ -1.08
SEMA3D-204ENST00000484038 KIF13BQ9NQT8 1826 aa8.31□□□□□ -1.08
SEMA3D-204ENST00000484038 KIAA1551Q9HCM1 1747 aa8.31□□□□□ -1.08
SEMA3D-204ENST00000484038 A0A0G2JLW4 131 aa8.3□□□□□ -1.08
SEMA3D-204ENST00000484038 TERTO14746 1132 aaKnown RBP8.3□□□□□ -1.08
SEMA3D-204ENST00000484038 INHAP05111 366 aa8.3□□□□□ -1.08
SEMA3D-204ENST00000484038 SCNN1DP51172 638 aa8.3□□□□□ -1.08
SEMA3D-204ENST00000484038 CENPCQ03188 943 aa8.3□□□□□ -1.08
SEMA3D-204ENST00000484038 ITPK1Q13572 414 aa8.3□□□□□ -1.08
SEMA3D-204ENST00000484038 RBM19Q9Y4C8 960 aaKnown RBP8.3□□□□□ -1.08
SEMA3D-204ENST00000484038 PCDHGA11Q9Y5H2 935 aa8.3□□□□□ -1.08
SEMA3D-204ENST00000484038 NCAPD2Q15021 1401 aa8.3□□□□□ -1.08
SEMA3D-204ENST00000484038 TOMM70O94826 608 aa8.29□□□□□ -1.08
SEMA3D-204ENST00000484038 RFX1P22670 979 aa8.29□□□□□ -1.08
SEMA3D-204ENST00000484038 ARHGAP27Q6ZUM4 889 aa8.29□□□□□ -1.08
SEMA3D-204ENST00000484038 CCDC97Q96F63 343 aaPredicted RBP8.29□□□□□ -1.08
SEMA3D-204ENST00000484038 XAGE2Q96GT9 111 aa8.29□□□□□ -1.08
SEMA3D-204ENST00000484038 ZNF594Q96JF6 807 aaPredicted RBP8.29□□□□□ -1.08
SEMA3D-204ENST00000484038 DNAAF2Q9NVR5 837 aaKnown RBP8.29□□□□□ -1.08
SEMA3D-204ENST00000484038 ANKRD26Q9UPS8 1709 aa8.29□□□□□ -1.08
SEMA3D-204ENST00000484038 C10orf71Q711Q0 1435 aa8.29□□□□□ -1.08
SEMA3D-204ENST00000484038 WDR90Q96KV7 1748 aa8.29□□□□□ -1.08
SEMA3D-204ENST00000484038 RASA1P20936 1047 aa8.29□□□□□ -1.08
SEMA3D-204ENST00000484038 POU4F2Q12837 409 aa8.29□□□□□ -1.08
SEMA3D-204ENST00000484038 GNASQ5JWF2 1037 aa8.29□□□□□ -1.08
SEMA3D-204ENST00000484038 OGFOD1Q8N543 542 aa8.29□□□□□ -1.08
SEMA3D-204ENST00000484038 TPCN2Q8NHX9 752 aa8.29□□□□□ -1.08
SEMA3D-204ENST00000484038 NMRK2Q9NPI5 230 aa8.29□□□□□ -1.08
SEMA3D-204ENST00000484038 RTCBQ9Y3I0 505 aaKnown RBP8.29□□□□□ -1.08
SEMA3D-204ENST00000484038 C4AP0C0L4 1744 aa8.28□□□□□ -1.08
SEMA3D-204ENST00000484038 PHKG2P15735 406 aa8.28□□□□□ -1.08
SEMA3D-204ENST00000484038 TGFB2P61812 414 aa8.28□□□□□ -1.08
SEMA3D-204ENST00000484038 CDCA8Q53HL2 280 aa8.28□□□□□ -1.08
SEMA3D-204ENST00000484038 TRAPPC3LQ5T215 181 aa8.28□□□□□ -1.08
SEMA3D-204ENST00000484038 ERICH6Q7L0X2 663 aa8.28□□□□□ -1.08
SEMA3D-204ENST00000484038 C16orf71Q8IYS4 520 aaPredicted RBP8.28□□□□□ -1.08
SEMA3D-204ENST00000484038 IFNL2Q8IZJ0 200 aa8.28□□□□□ -1.08
SEMA3D-204ENST00000484038 CCDC155Q8N6L0 562 aa8.28□□□□□ -1.08
SEMA3D-204ENST00000484038 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.28□□□□□ -1.08
SEMA3D-204ENST00000484038 GRIP2Q9C0E4 1043 aa8.28□□□□□ -1.08
SEMA3D-204ENST00000484038 ATG3Q9NT62 314 aa8.28□□□□□ -1.08
SEMA3D-204ENST00000484038 TMEM229AB2RXF0 380 aa8.27□□□□□ -1.09
SEMA3D-204ENST00000484038 PPFIA3O75145 1194 aa8.27□□□□□ -1.09
SEMA3D-204ENST00000484038 WFS1O76024 890 aa8.27□□□□□ -1.09
SEMA3D-204ENST00000484038 DPEP1P16444 411 aa8.27□□□□□ -1.09
SEMA3D-204ENST00000484038 PHKA2P46019 1235 aa8.27□□□□□ -1.09
SEMA3D-204ENST00000484038 CLDN10P78369 228 aa8.27□□□□□ -1.09
SEMA3D-204ENST00000484038 CCDC102BQ68D86 513 aa8.27□□□□□ -1.09
SEMA3D-204ENST00000484038 TAS1R3Q7RTX0 852 aa8.27□□□□□ -1.09
SEMA3D-204ENST00000484038 NLGN1Q8N2Q7 840 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms