RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 MINPP1Q9UNW1 487 aa18.75■□□□□ 0.59
RXRA-202ENST00000481739 SMC3Q9UQE7 1217 aa18.75■□□□□ 0.59
RXRA-202ENST00000481739 ARAP2Q8WZ64 1704 aa18.74■□□□□ 0.59
RXRA-202ENST00000481739 FGFR2P21802 821 aa18.74■□□□□ 0.59
RXRA-202ENST00000481739 GRAPQ13588 217 aa18.74■□□□□ 0.59
RXRA-202ENST00000481739 GRAPLQ8TC17 118 aaPredicted RBP18.74■□□□□ 0.59
RXRA-202ENST00000481739 APPBP2Q92624 585 aa18.74■□□□□ 0.59
RXRA-202ENST00000481739 NEK1Q96PY6 1258 aa18.74■□□□□ 0.59
RXRA-202ENST00000481739 PDGFDQ9GZP0 370 aaPredicted RBP18.74■□□□□ 0.59
RXRA-202ENST00000481739 CTNNA3Q9UI47 895 aa18.74■□□□□ 0.59
RXRA-202ENST00000481739 MAST3O60307 1309 aa18.74■□□□□ 0.59
RXRA-202ENST00000481739 SNAP23O00161 211 aa18.74■□□□□ 0.59
RXRA-202ENST00000481739 CRY2Q49AN0 593 aa18.74■□□□□ 0.59
RXRA-202ENST00000481739 SEC62Q99442 399 aaKnown RBP18.74■□□□□ 0.59
RXRA-202ENST00000481739 NRXN2Q9P2S2 1712 aa18.73■□□□□ 0.59
RXRA-202ENST00000481739 CCDC129Q6ZRS4 1044 aa18.73■□□□□ 0.59
RXRA-202ENST00000481739 CYP21A2P08686 494 aa18.72■□□□□ 0.59
RXRA-202ENST00000481739 HSPD1P10809 573 aaKnown RBP18.72■□□□□ 0.59
RXRA-202ENST00000481739 CPA1P15085 419 aa18.72■□□□□ 0.59
RXRA-202ENST00000481739 ZAP70P43403 619 aa18.72■□□□□ 0.59
RXRA-202ENST00000481739 MCTP1Q6DN14 999 aa18.72■□□□□ 0.59
RXRA-202ENST00000481739 ATP6V1DQ9Y5K8 247 aa18.72■□□□□ 0.59
RXRA-202ENST00000481739 ANKRD31Q8N7Z5 1873 aa18.72■□□□□ 0.59
RXRA-202ENST00000481739 PDE6BP35913 854 aa18.72■□□□□ 0.59
RXRA-202ENST00000481739 MCAMP43121 646 aa18.72■□□□□ 0.59
RXRA-202ENST00000481739 UPF1Q92900 1129 aaKnown RBP eCLIP18.72■□□□□ 0.595e-9■■■■■ 44.6
RXRA-202ENST00000481739 ANKRD2Q9GZV1 360 aa18.72■□□□□ 0.59
RXRA-202ENST00000481739 KLRG2A4D1S0 409 aaPredicted RBP18.71■□□□□ 0.59
RXRA-202ENST00000481739 CCDC102BQ68D86 513 aa18.71■□□□□ 0.59
RXRA-202ENST00000481739 CHMP4CQ96CF2 233 aa18.71■□□□□ 0.59
RXRA-202ENST00000481739 A0A1B0GUL6 1792 aa18.7■□□□□ 0.58
RXRA-202ENST00000481739 PDCP20941 246 aa18.7■□□□□ 0.58
RXRA-202ENST00000481739 SCARF1Q14162 830 aa18.7■□□□□ 0.58
RXRA-202ENST00000481739 UBE3CQ15386 1083 aa18.7■□□□□ 0.58
RXRA-202ENST00000481739 LMBRD1Q9NUN5 540 aa18.7■□□□□ 0.58
RXRA-202ENST00000481739 TPCN1Q9ULQ1 816 aa18.7■□□□□ 0.58
RXRA-202ENST00000481739 DDX49Q9Y6V7 483 aaKnown RBP18.7■□□□□ 0.58
RXRA-202ENST00000481739 HOXA10P31260 410 aaPredicted RBP18.7■□□□□ 0.58
RXRA-202ENST00000481739 ME3Q16798 604 aa18.7■□□□□ 0.58
RXRA-202ENST00000481739 WASHC4Q2M389 1173 aa18.7■□□□□ 0.58
RXRA-202ENST00000481739 CCDC83Q8IWF9 413 aa18.7■□□□□ 0.58
RXRA-202ENST00000481739 OSBP2Q969R2 916 aa18.7■□□□□ 0.58
RXRA-202ENST00000481739 FSD2A1L4K1 749 aa18.69■□□□□ 0.58
RXRA-202ENST00000481739 GOLGA6L3A6NEY3 463 aa18.69■□□□□ 0.58
RXRA-202ENST00000481739 STX6O43752 255 aa18.69■□□□□ 0.58
RXRA-202ENST00000481739 PHKA1P46020 1223 aa18.69■□□□□ 0.58
RXRA-202ENST00000481739 UBE4AQ14139 1066 aa18.69■□□□□ 0.58
RXRA-202ENST00000481739 SLC16A10Q8TF71 515 aa18.69■□□□□ 0.58
RXRA-202ENST00000481739 CRAMP1Q96RY5 1269 aa18.69■□□□□ 0.58
RXRA-202ENST00000481739 ANKIB1Q9P2G1 1089 aa18.69■□□□□ 0.58
RXRA-202ENST00000481739 M0R2C6 588 aa18.68■□□□□ 0.58
RXRA-202ENST00000481739 BBOX1O75936 387 aa18.68■□□□□ 0.58
RXRA-202ENST00000481739 LARGE1O95461 756 aa18.68■□□□□ 0.58
RXRA-202ENST00000481739 MBD3O95983 291 aa18.68■□□□□ 0.58
RXRA-202ENST00000481739 CHGBP05060 677 aa18.68■□□□□ 0.58
RXRA-202ENST00000481739 ZSCAN22P10073 491 aaPredicted RBP18.68■□□□□ 0.58
RXRA-202ENST00000481739 ADD2P35612 726 aa18.68■□□□□ 0.58
RXRA-202ENST00000481739 TOB2Q14106 344 aaPredicted RBP18.68■□□□□ 0.58
RXRA-202ENST00000481739 DHX32Q7L7V1 743 aaKnown RBP18.68■□□□□ 0.58
RXRA-202ENST00000481739 AKAP11Q9UKA4 1901 aa18.68■□□□□ 0.58
RXRA-202ENST00000481739 MYH7P12883 1935 aa18.68■□□□□ 0.58
RXRA-202ENST00000481739 WTIPA6NIX2 430 aaPredicted RBP18.67■□□□□ 0.58
RXRA-202ENST00000481739 SRGNP10124 158 aa18.67■□□□□ 0.58
RXRA-202ENST00000481739 NPR1P16066 1061 aa18.67■□□□□ 0.58
RXRA-202ENST00000481739 FBXL16Q8N461 479 aa18.67■□□□□ 0.58
RXRA-202ENST00000481739 SYT1P21579 422 aa18.67■□□□□ 0.58
RXRA-202ENST00000481739 GJB2P29033 226 aa18.67■□□□□ 0.58
RXRA-202ENST00000481739 BCAMP50895 628 aa18.67■□□□□ 0.58
RXRA-202ENST00000481739 IMMTQ16891 758 aaKnown RBP18.67■□□□□ 0.58
RXRA-202ENST00000481739 C2CD5Q86YS7 1000 aa18.67■□□□□ 0.58
RXRA-202ENST00000481739 GZF1Q9H116 711 aaPredicted RBP18.67■□□□□ 0.58
RXRA-202ENST00000481739 TAF6LQ9Y6J9 622 aa18.67■□□□□ 0.58
RXRA-202ENST00000481739 ZNF622Q969S3 477 aaKnown RBP eCLIP18.66■□□□□ 0.58
RXRA-202ENST00000481739 MASTLQ96GX5 879 aa18.66■□□□□ 0.58
RXRA-202ENST00000481739 AGXT2Q9BYV1 514 aa18.66■□□□□ 0.58
RXRA-202ENST00000481739 H0YIN7 160 aa18.65■□□□□ 0.58
RXRA-202ENST00000481739 ALDH1B1P30837 517 aa18.65■□□□□ 0.58
RXRA-202ENST00000481739 GYG1P46976 350 aa18.65■□□□□ 0.58
RXRA-202ENST00000481739 CAVIN4Q5BKX8 364 aa18.65■□□□□ 0.58
RXRA-202ENST00000481739 PI16Q6UXB8 463 aa18.65■□□□□ 0.58
RXRA-202ENST00000481739 SLC51AQ86UW1 340 aa18.65■□□□□ 0.58
RXRA-202ENST00000481739 VPS37DQ86XT2 251 aa18.65■□□□□ 0.58
RXRA-202ENST00000481739 SPATA5Q8NB90 893 aa18.65■□□□□ 0.58
RXRA-202ENST00000481739 ZNF804BA4D1E1 1349 aa18.65■□□□□ 0.58
RXRA-202ENST00000481739 PPEF1O14829 653 aaPredicted RBP18.65■□□□□ 0.58
RXRA-202ENST00000481739 GPAA1O43292 621 aa18.65■□□□□ 0.58
RXRA-202ENST00000481739 ZBTB7AO95365 584 aa18.65■□□□□ 0.58
RXRA-202ENST00000481739 R3HDM1Q15032 1099 aaKnown RBP18.65■□□□□ 0.58
RXRA-202ENST00000481739 SLC9C2Q5TAH2 1124 aa18.65■□□□□ 0.58
RXRA-202ENST00000481739 XDHP47989 1333 aa18.64■□□□□ 0.57
RXRA-202ENST00000481739 E7EWF7 191 aa18.64■□□□□ 0.57
RXRA-202ENST00000481739 PRPF40AO75400 957 aaKnown RBP18.64■□□□□ 0.57
RXRA-202ENST00000481739 ST3GAL1Q11201 340 aa18.64■□□□□ 0.57
RXRA-202ENST00000481739 MAP3K12Q12852 859 aa18.64■□□□□ 0.57
RXRA-202ENST00000481739 CSPP1Q1MSJ5 1256 aa18.64■□□□□ 0.57
RXRA-202ENST00000481739 TMEM87AQ8NBN3 555 aa18.64■□□□□ 0.57
RXRA-202ENST00000481739 GTF3C6Q969F1 213 aa18.64■□□□□ 0.57
RXRA-202ENST00000481739 LARP6Q9BRS8 491 aaKnown RBP18.64■□□□□ 0.57
RXRA-202ENST00000481739 LLPHQ9BRT6 129 aaKnown RBP18.64■□□□□ 0.57
RXRA-202ENST00000481739 GNL3LQ9NVN8 582 aaKnown RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms