RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 DBNLQ9UJU6 430 aaKnown RBP14.03□□□□□ -0.16
PCCB-214ENST00000478469 Q6ZUG5 572 aa14.03□□□□□ -0.16
PCCB-214ENST00000478469 IFIT1BQ5T764 474 aaKnown RBP14.03□□□□□ -0.16
PCCB-214ENST00000478469 RBM26Q5T8P6 1007 aaKnown RBP14.03□□□□□ -0.16
PCCB-214ENST00000478469 DHX32Q7L7V1 743 aaKnown RBP14.03□□□□□ -0.16
PCCB-214ENST00000478469 NECAB1Q8N987 351 aa14.03□□□□□ -0.16
PCCB-214ENST00000478469 BCAMP50895 628 aa14.02□□□□□ -0.16
PCCB-214ENST00000478469 ANKRD20A12PQ8NF67 263 aa14.02□□□□□ -0.16
PCCB-214ENST00000478469 ARMT1Q9H993 441 aa14.02□□□□□ -0.16
PCCB-214ENST00000478469 MAST3O60307 1309 aa14.02□□□□□ -0.16
PCCB-214ENST00000478469 GSPT1P15170 499 aaKnown RBP14.02□□□□□ -0.16
PCCB-214ENST00000478469 GJB2P29033 226 aa14.02□□□□□ -0.16
PCCB-214ENST00000478469 TRIM28Q13263 835 aaKnown RBP14.02□□□□□ -0.16
PCCB-214ENST00000478469 ARHGEF1Q92888 912 aaKnown RBP14.02□□□□□ -0.16
PCCB-214ENST00000478469 STAP2Q9UGK3 403 aa14.02□□□□□ -0.16
PCCB-214ENST00000478469 BBOX1O75936 387 aa14.02□□□□□ -0.17
PCCB-214ENST00000478469 MMP10P09238 476 aa14.02□□□□□ -0.17
PCCB-214ENST00000478469 POLA2Q14181 598 aa14.02□□□□□ -0.17
PCCB-214ENST00000478469 TTC6Q86TZ1 520 aa14.02□□□□□ -0.17
PCCB-214ENST00000478469 ISCA1Q9BUE6 129 aa14.02□□□□□ -0.17
PCCB-214ENST00000478469 KIF20BQ96Q89 1820 aa14.02□□□□□ -0.17
PCCB-214ENST00000478469 ZNF532Q9HCE3 1301 aa14.02□□□□□ -0.17
PCCB-214ENST00000478469 IFT172Q9UG01 1749 aa14.01□□□□□ -0.17
PCCB-214ENST00000478469 TPM2P07951 284 aa14.01□□□□□ -0.17
PCCB-214ENST00000478469 EPHA10Q5JZY3 1008 aa14.01□□□□□ -0.17
PCCB-214ENST00000478469 SNX21Q969T3 373 aa14.01□□□□□ -0.17
PCCB-214ENST00000478469 HAUS7Q99871 368 aa14.01□□□□□ -0.17
PCCB-214ENST00000478469 ZNF804BA4D1E1 1349 aa14.01□□□□□ -0.17
PCCB-214ENST00000478469 ADAMTSL3P82987 1691 aa14.01□□□□□ -0.17
PCCB-214ENST00000478469 PPIP5K2O43314 1243 aa14.01□□□□□ -0.17
PCCB-214ENST00000478469 PPFIA3O75145 1194 aa14.01□□□□□ -0.17
PCCB-214ENST00000478469 MTX1Q13505 466 aa14.01□□□□□ -0.17
PCCB-214ENST00000478469 PPP4R3BQ5MIZ7 849 aa14.01□□□□□ -0.17
PCCB-214ENST00000478469 ADCY9O60503 1353 aa14.01□□□□□ -0.17
PCCB-214ENST00000478469 CHST3Q7LGC8 479 aa14.01□□□□□ -0.17
PCCB-214ENST00000478469 STX6O43752 255 aa14□□□□□ -0.17
PCCB-214ENST00000478469 PHKA1P46020 1223 aa14□□□□□ -0.17
PCCB-214ENST00000478469 GTF2IP78347 998 aa14□□□□□ -0.17
PCCB-214ENST00000478469 TMC4Q7Z404 712 aa14□□□□□ -0.17
PCCB-214ENST00000478469 CERS3Q8IU89 383 aa14□□□□□ -0.17
PCCB-214ENST00000478469 MEGF6O75095 1541 aa14□□□□□ -0.17
PCCB-214ENST00000478469 IQSEC2Q5JU85 1478 aa14□□□□□ -0.17
PCCB-214ENST00000478469 LETM1O95202 739 aaPredicted RBP14□□□□□ -0.17
PCCB-214ENST00000478469 EIF5P55010 431 aaKnown RBP14□□□□□ -0.17
PCCB-214ENST00000478469 SCAND2PQ9GZW5 306 aaPredicted RBP14□□□□□ -0.17
PCCB-214ENST00000478469 OSBPL3Q9H4L5 887 aa14□□□□□ -0.17
PCCB-214ENST00000478469 FAM13BQ9NYF5 915 aa14□□□□□ -0.17
PCCB-214ENST00000478469 XDHP47989 1333 aa14□□□□□ -0.17
PCCB-214ENST00000478469 TPM3P06753 285 aa14□□□□□ -0.17
PCCB-214ENST00000478469 MFSD14BQ5SR56 506 aa14□□□□□ -0.17
PCCB-214ENST00000478469 SLC26A6Q9BXS9 759 aa14□□□□□ -0.17
PCCB-214ENST00000478469 VAT1LQ9HCJ6 419 aa14□□□□□ -0.17
PCCB-214ENST00000478469 AATFQ9NY61 560 aaKnown RBP eCLIP14□□□□□ -0.17
PCCB-214ENST00000478469 LEMD3Q9Y2U8 911 aa14□□□□□ -0.17
PCCB-214ENST00000478469 ADORA1P30542 326 aa14□□□□□ -0.17
PCCB-214ENST00000478469 NLRP5P59047 1200 aa14□□□□□ -0.17
PCCB-214ENST00000478469 BCS1LQ9Y276 419 aa14□□□□□ -0.17
PCCB-214ENST00000478469 COL3A1P02461 1466 aaPredicted RBP14□□□□□ -0.17
PCCB-214ENST00000478469 RBM25P49756 843 aaKnown RBP13.99□□□□□ -0.17
PCCB-214ENST00000478469 RTN1Q16799 776 aa13.99□□□□□ -0.17
PCCB-214ENST00000478469 OLFM4Q6UX06 510 aa13.99□□□□□ -0.17
PCCB-214ENST00000478469 NAT10Q9H0A0 1025 aaKnown RBP13.99□□□□□ -0.17
PCCB-214ENST00000478469 SASH1O94885 1247 aa13.99□□□□□ -0.17
PCCB-214ENST00000478469 AK2P54819 239 aa13.99□□□□□ -0.17
PCCB-214ENST00000478469 CEP131Q9UPN4 1083 aa13.99□□□□□ -0.17
PCCB-214ENST00000478469 GJA3Q9Y6H8 435 aa13.99□□□□□ -0.17
PCCB-214ENST00000478469 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.99□□□□□ -0.17
PCCB-214ENST00000478469 ZNF76P36508 570 aa13.99□□□□□ -0.17
PCCB-214ENST00000478469 GNAQP50148 359 aa13.99□□□□□ -0.17
PCCB-214ENST00000478469 RUFY3Q7L099 469 aa13.99□□□□□ -0.17
PCCB-214ENST00000478469 SYNE4Q8N205 404 aa13.99□□□□□ -0.17
PCCB-214ENST00000478469 TLR7Q9NYK1 1049 aaKnown RBP13.99□□□□□ -0.17
PCCB-214ENST00000478469 RC3H1Q5TC82 1133 aaKnown RBP13.98□□□□□ -0.17
PCCB-214ENST00000478469 NIM1KQ8IY84 436 aa13.98□□□□□ -0.17
PCCB-214ENST00000478469 SLC27A2O14975 620 aa13.98□□□□□ -0.17
PCCB-214ENST00000478469 CCDC12Q8WUD4 166 aaPredicted RBP13.98□□□□□ -0.17
PCCB-214ENST00000478469 CCDC194A0A1B0GVG4 234 aa13.98□□□□□ -0.17
PCCB-214ENST00000478469 TPM1P09493 284 aa13.98□□□□□ -0.17
PCCB-214ENST00000478469 PDE6AP16499 860 aa13.98□□□□□ -0.17
PCCB-214ENST00000478469 EIF6P56537 245 aaKnown RBP13.98□□□□□ -0.17
PCCB-214ENST00000478469 TBC1D9BQ66K14 1250 aa13.98□□□□□ -0.17
PCCB-214ENST00000478469 COL5A2P05997 1499 aaPredicted RBP13.98□□□□□ -0.17
PCCB-214ENST00000478469 CDHR2Q9BYE9 1310 aa13.97□□□□□ -0.17
PCCB-214ENST00000478469 EPB41L2O43491 1005 aaKnown RBP13.97□□□□□ -0.17
PCCB-214ENST00000478469 TSR1Q2NL82 804 aaKnown RBP13.97□□□□□ -0.17
PCCB-214ENST00000478469 PPEF1O14829 653 aaPredicted RBP13.97□□□□□ -0.17
PCCB-214ENST00000478469 RNF214Q8ND24 703 aa13.97□□□□□ -0.17
PCCB-214ENST00000478469 EN1Q05925 392 aaPredicted RBP13.97□□□□□ -0.17
PCCB-214ENST00000478469 HOMER1Q86YM7 354 aa13.97□□□□□ -0.17
PCCB-214ENST00000478469 TNMDQ9H2S6 317 aa13.97□□□□□ -0.17
PCCB-214ENST00000478469 KIF1AQ12756 1690 aa13.96□□□□□ -0.17
PCCB-214ENST00000478469 CPA1P15085 419 aa13.96□□□□□ -0.17
PCCB-214ENST00000478469 TNNI2P48788 182 aa13.96□□□□□ -0.17
PCCB-214ENST00000478469 TTLL5Q6EMB2 1281 aa13.96□□□□□ -0.17
PCCB-214ENST00000478469 ATP10DQ9P241 1426 aa13.96□□□□□ -0.17
PCCB-214ENST00000478469 A0A0D9SFI3 127 aa13.96□□□□□ -0.17
PCCB-214ENST00000478469 B4E1Z4 1266 aa13.96□□□□□ -0.17
PCCB-214ENST00000478469 APOBRQ0VD83 1088 aa13.96□□□□□ -0.17
PCCB-214ENST00000478469 TTF2Q9UNY4 1162 aaKnown RBP13.96□□□□□ -0.17
PCCB-214ENST00000478469 ADGRB2O60241 1585 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms