RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 C1QTNF2Q9BXJ5 285 aa8.48□□□□□ -1.05
LINC00173-202ENST00000477702 ZNF277Q9NRM2 450 aaPredicted RBP8.48□□□□□ -1.05
LINC00173-202ENST00000477702 TJP1Q07157 1748 aa8.48□□□□□ -1.05
LINC00173-202ENST00000477702 NRXN2Q9P2S2 1712 aa8.48□□□□□ -1.05
LINC00173-202ENST00000477702 ADAMTSL1Q8N6G6 1762 aa8.48□□□□□ -1.05
LINC00173-202ENST00000477702 ST20-MTHFSA0A0A6YYL1 179 aa8.47□□□□□ -1.05
LINC00173-202ENST00000477702 CA12O43570 354 aa8.47□□□□□ -1.05
LINC00173-202ENST00000477702 HSP90AB1P08238 724 aaKnown RBP8.47□□□□□ -1.05
LINC00173-202ENST00000477702 PDE6BP35913 854 aa8.47□□□□□ -1.05
LINC00173-202ENST00000477702 MAP2K2P36507 400 aa8.47□□□□□ -1.05
LINC00173-202ENST00000477702 MTHFSP49914 203 aa8.47□□□□□ -1.05
LINC00173-202ENST00000477702 CIAPIN1Q6FI81 312 aa8.47□□□□□ -1.05
LINC00173-202ENST00000477702 EHBP1Q8NDI1 1231 aa8.47□□□□□ -1.05
LINC00173-202ENST00000477702 CALR3Q96L12 384 aaKnown RBP8.47□□□□□ -1.05
LINC00173-202ENST00000477702 BRIP1Q9BX63 1249 aa8.47□□□□□ -1.05
LINC00173-202ENST00000477702 COL15A1P39059 1388 aa8.47□□□□□ -1.05
LINC00173-202ENST00000477702 COL11A2P13942 1736 aaPredicted RBP8.46□□□□□ -1.05
LINC00173-202ENST00000477702 SLX4Q8IY92 1834 aa8.46□□□□□ -1.06
LINC00173-202ENST00000477702 CYP19A1P11511 503 aaPredicted RBP8.46□□□□□ -1.06
LINC00173-202ENST00000477702 EIF4G2P78344 907 aaKnown RBP eCLIP8.46□□□□□ -1.06
LINC00173-202ENST00000477702 TBC1D9BQ66K14 1250 aa8.46□□□□□ -1.06
LINC00173-202ENST00000477702 PRR5LQ6MZQ0 368 aa8.46□□□□□ -1.06
LINC00173-202ENST00000477702 OLFM4Q6UX06 510 aa8.46□□□□□ -1.06
LINC00173-202ENST00000477702 ZNF598Q86UK7 904 aaKnown RBP8.46□□□□□ -1.06
LINC00173-202ENST00000477702 MRGPRX2Q96LB1 330 aa8.46□□□□□ -1.06
LINC00173-202ENST00000477702 ARID3AQ99856 593 aa8.46□□□□□ -1.06
LINC00173-202ENST00000477702 PKD2L1Q9P0L9 805 aa8.46□□□□□ -1.06
LINC00173-202ENST00000477702 ZBTB1Q9Y2K1 713 aa8.46□□□□□ -1.06
LINC00173-202ENST00000477702 TLL2Q9Y6L7 1015 aa8.46□□□□□ -1.06
LINC00173-202ENST00000477702 ANKRD31Q8N7Z5 1873 aa8.46□□□□□ -1.06
LINC00173-202ENST00000477702 WASHC2AQ641Q2 1341 aa8.46□□□□□ -1.06
LINC00173-202ENST00000477702 PIK3CDO00329 1044 aa8.45□□□□□ -1.06
LINC00173-202ENST00000477702 CANXP27824 592 aaKnown RBP8.45□□□□□ -1.06
LINC00173-202ENST00000477702 SEMA3FQ13275 785 aa8.45□□□□□ -1.06
LINC00173-202ENST00000477702 PLEKHO1Q53GL0 409 aaPredicted RBP8.45□□□□□ -1.06
LINC00173-202ENST00000477702 DZIP3Q86Y13 1208 aaKnown RBP8.45□□□□□ -1.06
LINC00173-202ENST00000477702 CCDC82Q8N4S0 544 aa8.45□□□□□ -1.06
LINC00173-202ENST00000477702 CNKSR1Q969H4 720 aa8.45□□□□□ -1.06
LINC00173-202ENST00000477702 TESK2Q96S53 571 aa8.45□□□□□ -1.06
LINC00173-202ENST00000477702 ZIC5Q96T25 663 aa8.45□□□□□ -1.06
LINC00173-202ENST00000477702 GJA3Q9Y6H8 435 aa8.45□□□□□ -1.06
LINC00173-202ENST00000477702 V9GY48 417 aaPredicted RBP8.45□□□□□ -1.06
LINC00173-202ENST00000477702 WNT7AO00755 349 aa8.44□□□□□ -1.06
LINC00173-202ENST00000477702 NPHP1O15259 732 aa8.44□□□□□ -1.06
LINC00173-202ENST00000477702 SIAH2O43255 324 aa8.44□□□□□ -1.06
LINC00173-202ENST00000477702 VARSP26640 1264 aaKnown RBP8.44□□□□□ -1.06
LINC00173-202ENST00000477702 EIF4A2Q14240 407 aaKnown RBP8.44□□□□□ -1.06
LINC00173-202ENST00000477702 CCDC93Q567U6 631 aa8.44□□□□□ -1.06
LINC00173-202ENST00000477702 SOGA3Q5TF21 947 aa8.44□□□□□ -1.06
LINC00173-202ENST00000477702 STYK1Q6J9G0 422 aa8.44□□□□□ -1.06
LINC00173-202ENST00000477702 UCN2Q96RP3 112 aa8.44□□□□□ -1.06
LINC00173-202ENST00000477702 PDZRN3Q9UPQ7 1066 aa8.44□□□□□ -1.06
LINC00173-202ENST00000477702 CUL9Q8IWT3 2517 aa8.43□□□□□ -1.06
LINC00173-202ENST00000477702 CACNA1SQ13698 1873 aa8.43□□□□□ -1.06
LINC00173-202ENST00000477702 TNFRSF10AO00220 468 aa8.43□□□□□ -1.06
LINC00173-202ENST00000477702 CELF2O95319 508 aaKnown RBP8.43□□□□□ -1.06
LINC00173-202ENST00000477702 SRGNP10124 158 aa8.43□□□□□ -1.06
LINC00173-202ENST00000477702 EPS15P42566 896 aa8.43□□□□□ -1.06
LINC00173-202ENST00000477702 FKBP4Q02790 459 aaKnown RBP eCLIP8.43□□□□□ -1.06
LINC00173-202ENST00000477702 SLC39A6Q13433 755 aa8.43□□□□□ -1.06
LINC00173-202ENST00000477702 ARID5BQ14865 1188 aa8.43□□□□□ -1.06
LINC00173-202ENST00000477702 HABP4Q5JVS0 413 aaKnown RBP8.43□□□□□ -1.06
LINC00173-202ENST00000477702 C1orf141Q5JVX7 400 aa8.43□□□□□ -1.06
LINC00173-202ENST00000477702 SAPCD2Q86UD0 394 aa8.43□□□□□ -1.06
LINC00173-202ENST00000477702 GPC2Q8N158 579 aa8.43□□□□□ -1.06
LINC00173-202ENST00000477702 FAM174AQ8TBP5 190 aa8.43□□□□□ -1.06
LINC00173-202ENST00000477702 C7orf43Q8WVR3 580 aa8.43□□□□□ -1.06
LINC00173-202ENST00000477702 SLC10A4Q96EP9 437 aa8.43□□□□□ -1.06
LINC00173-202ENST00000477702 CEP126Q9P2H0 1117 aa8.43□□□□□ -1.06
LINC00173-202ENST00000477702 KIF20BQ96Q89 1820 aa8.43□□□□□ -1.06
LINC00173-202ENST00000477702 FZD9O00144 591 aa8.42□□□□□ -1.06
LINC00173-202ENST00000477702 LMOD1P29536 600 aaPredicted RBP8.42□□□□□ -1.06
LINC00173-202ENST00000477702 TNNT2P45379 298 aaPredicted RBP8.42□□□□□ -1.06
LINC00173-202ENST00000477702 TSGA10IPQ3SY00 556 aa8.42□□□□□ -1.06
LINC00173-202ENST00000477702 TRIM67Q6ZTA4 783 aa8.42□□□□□ -1.06
LINC00173-202ENST00000477702 TRMT44Q8IYL2 757 aaKnown RBP8.42□□□□□ -1.06
LINC00173-202ENST00000477702 NBPF15Q8N660 670 aa8.42□□□□□ -1.06
LINC00173-202ENST00000477702 CNBD1Q8NA66 436 aa8.42□□□□□ -1.06
LINC00173-202ENST00000477702 MASTLQ96GX5 879 aa8.42□□□□□ -1.06
LINC00173-202ENST00000477702 ZNF408Q9H9D4 720 aa8.42□□□□□ -1.06
LINC00173-202ENST00000477702 POLKQ9UBT6 870 aa8.42□□□□□ -1.06
LINC00173-202ENST00000477702 GDF9O60383 454 aa8.41□□□□□ -1.06
LINC00173-202ENST00000477702 SOX11P35716 441 aa8.41□□□□□ -1.06
LINC00173-202ENST00000477702 IARSP41252 1262 aaKnown RBP8.41□□□□□ -1.06
LINC00173-202ENST00000477702 RAB15P59190 212 aa8.41□□□□□ -1.06
LINC00173-202ENST00000477702 AEBP1Q8IUX7 1158 aa8.41□□□□□ -1.06
LINC00173-202ENST00000477702 SYNE4Q8N205 404 aa8.41□□□□□ -1.06
LINC00173-202ENST00000477702 GCC1Q96CN9 775 aa8.41□□□□□ -1.06
LINC00173-202ENST00000477702 GLIS2Q9BZE0 524 aaPredicted RBP8.41□□□□□ -1.06
LINC00173-202ENST00000477702 SCNN1DP51172 638 aa8.4□□□□□ -1.06
LINC00173-202ENST00000477702 ST5P78524 1137 aa8.4□□□□□ -1.06
LINC00173-202ENST00000477702 AMOTQ4VCS5 1084 aa8.4□□□□□ -1.06
LINC00173-202ENST00000477702 TBC1D9Q6ZT07 1266 aa8.4□□□□□ -1.06
LINC00173-202ENST00000477702 VASH1Q7L8A9 365 aaPredicted RBP8.4□□□□□ -1.06
LINC00173-202ENST00000477702 JDP2Q8WYK2 163 aa8.4□□□□□ -1.06
LINC00173-202ENST00000477702 TRPM7Q96QT4 1865 aa8.4□□□□□ -1.07
LINC00173-202ENST00000477702 A0A087WZG4 1122 aa8.39□□□□□ -1.07
LINC00173-202ENST00000477702 GRM5P41594 1212 aa8.39□□□□□ -1.07
LINC00173-202ENST00000477702 EIF5P55010 431 aaKnown RBP8.39□□□□□ -1.07
LINC00173-202ENST00000477702 EIF6P56537 245 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms