RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 CASZ1Q86V15 1759 aa10.75□□□□□ -0.69
CHD6-207ENST00000476641 PHKG2P15735 406 aa10.74□□□□□ -0.69
CHD6-207ENST00000476641 MX2P20592 715 aa10.74□□□□□ -0.69
CHD6-207ENST00000476641 MTHFSP49914 203 aa10.74□□□□□ -0.69
CHD6-207ENST00000476641 SPG7Q9UQ90 795 aa10.74□□□□□ -0.69
CHD6-207ENST00000476641 TOGARAM1Q9Y4F4 1720 aa10.74□□□□□ -0.69
CHD6-207ENST00000476641 ZBBXA8MT70 800 aa10.73□□□□□ -0.69
CHD6-207ENST00000476641 ERVK-9P63128 1117 aa10.73□□□□□ -0.69
CHD6-207ENST00000476641 XP32Q5T750 250 aa10.73□□□□□ -0.69
CHD6-207ENST00000476641 CC2D2BQ6DHV5 1058 aa10.73□□□□□ -0.69
CHD6-207ENST00000476641 SULT6B1Q6IMI4 303 aa10.73□□□□□ -0.69
CHD6-207ENST00000476641 NBPF10Q6P3W6 841 aaKnown RBP10.73□□□□□ -0.69
CHD6-207ENST00000476641 AMIGO3Q86WK7 504 aa10.73□□□□□ -0.69
CHD6-207ENST00000476641 NBPF15Q8N660 670 aa10.73□□□□□ -0.69
CHD6-207ENST00000476641 GALNT6Q8NCL4 622 aa10.73□□□□□ -0.69
CHD6-207ENST00000476641 NSFL1CQ9UNZ2 370 aaKnown RBP10.73□□□□□ -0.69
CHD6-207ENST00000476641 PNPLA7Q6ZV29 1317 aa10.73□□□□□ -0.69
CHD6-207ENST00000476641 PALLDQ8WX93 1383 aa10.73□□□□□ -0.69
CHD6-207ENST00000476641 PKD1L3Q7Z443 1732 aa10.72□□□□□ -0.69
CHD6-207ENST00000476641 PROCP04070 461 aa10.72□□□□□ -0.69
CHD6-207ENST00000476641 GRIP2Q9C0E4 1043 aa10.72□□□□□ -0.69
CHD6-207ENST00000476641 PPP1R1BQ9UD71 204 aaPredicted RBP10.72□□□□□ -0.69
CHD6-207ENST00000476641 ASAP1Q9ULH1 1129 aa10.72□□□□□ -0.69
CHD6-207ENST00000476641 HMOX1P09601 288 aa10.71□□□□□ -0.69
CHD6-207ENST00000476641 FBXO45P0C2W1 286 aa10.71□□□□□ -0.69
CHD6-207ENST00000476641 ZNF530Q6P9A1 599 aaPredicted RBP10.71□□□□□ -0.69
CHD6-207ENST00000476641 IFNL2Q8IZJ0 200 aa10.71□□□□□ -0.69
CHD6-207ENST00000476641 TFCP2L1Q9NZI6 479 aa10.71□□□□□ -0.69
CHD6-207ENST00000476641 UTRNP46939 3433 aa10.7□□□□□ -0.7
CHD6-207ENST00000476641 KDM6AO15550 1401 aaPredicted RBP10.7□□□□□ -0.7
CHD6-207ENST00000476641 CLN3Q13286 438 aa10.7□□□□□ -0.7
CHD6-207ENST00000476641 CYP2U1Q7Z449 544 aa10.7□□□□□ -0.7
CHD6-207ENST00000476641 NUCKS1Q9H1E3 243 aaKnown RBP10.7□□□□□ -0.7
CHD6-207ENST00000476641 OIP5O43482 229 aa10.69□□□□□ -0.7
CHD6-207ENST00000476641 ITPK1Q13572 414 aa10.69□□□□□ -0.7
CHD6-207ENST00000476641 PLEKHO1Q53GL0 409 aaPredicted RBP10.69□□□□□ -0.7
CHD6-207ENST00000476641 RNF20Q5VTR2 975 aa10.69□□□□□ -0.7
CHD6-207ENST00000476641 MSL1Q68DK7 614 aa10.69□□□□□ -0.7
CHD6-207ENST00000476641 COL23A1Q86Y22 540 aaPredicted RBP10.69□□□□□ -0.7
CHD6-207ENST00000476641 LINC00116Q8NCU8 138 aa10.69□□□□□ -0.7
CHD6-207ENST00000476641 MTFR1LQ9H019 292 aa10.69□□□□□ -0.7
CHD6-207ENST00000476641 TIMMDC1Q9NPL8 285 aa10.69□□□□□ -0.7
CHD6-207ENST00000476641 ATG3Q9NT62 314 aa10.69□□□□□ -0.7
CHD6-207ENST00000476641 TMOD3Q9NYL9 352 aa10.69□□□□□ -0.7
CHD6-207ENST00000476641 COL3A1P02461 1466 aaPredicted RBP10.68□□□□□ -0.7
CHD6-207ENST00000476641 KDRP35968 1356 aa10.68□□□□□ -0.7
CHD6-207ENST00000476641 LY75O60449 1722 aa10.68□□□□□ -0.7
CHD6-207ENST00000476641 LOC102724428A0A0B4J2F2 783 aa10.68□□□□□ -0.7
CHD6-207ENST00000476641 SPATA31C2B4DYI2 1134 aa10.68□□□□□ -0.7
CHD6-207ENST00000476641 F11P03951 625 aa10.68□□□□□ -0.7
CHD6-207ENST00000476641 SCTRP47872 440 aa10.68□□□□□ -0.7
CHD6-207ENST00000476641 SIK1P57059 783 aa10.68□□□□□ -0.7
CHD6-207ENST00000476641 SLC4A9Q96Q91 983 aa10.68□□□□□ -0.7
CHD6-207ENST00000476641 FHDC1Q9C0D6 1143 aaPredicted RBP10.68□□□□□ -0.7
CHD6-207ENST00000476641 WDR44Q5JSH3 913 aa10.67□□□□□ -0.7
CHD6-207ENST00000476641 TAS1R3Q7RTX0 852 aa10.67□□□□□ -0.7
CHD6-207ENST00000476641 OXCT2Q9BYC2 517 aaPredicted RBP10.67□□□□□ -0.7
CHD6-207ENST00000476641 ARHGEF10LQ9HCE6 1279 aa10.67□□□□□ -0.7
CHD6-207ENST00000476641 TUBGCP6Q96RT7 1819 aa10.67□□□□□ -0.7
CHD6-207ENST00000476641 NPC1L1Q9UHC9 1359 aa10.66□□□□□ -0.7
CHD6-207ENST00000476641 GOLGB1Q14789 3259 aaKnown RBP10.66□□□□□ -0.7
CHD6-207ENST00000476641 ITGB4P16144 1822 aa10.66□□□□□ -0.7
CHD6-207ENST00000476641 DIAPH1O60610 1272 aaKnown RBP10.66□□□□□ -0.7
CHD6-207ENST00000476641 SNRPNP63162 240 aaKnown RBP10.66□□□□□ -0.7
CHD6-207ENST00000476641 SMARCC1Q92922 1105 aaPredicted RBP10.66□□□□□ -0.7
CHD6-207ENST00000476641 ARXQ96QS3 562 aa10.66□□□□□ -0.7
CHD6-207ENST00000476641 LGR6Q9HBX8 967 aa10.66□□□□□ -0.7
CHD6-207ENST00000476641 U2SURPO15042 1029 aaKnown RBP10.65□□□□□ -0.7
CHD6-207ENST00000476641 MAP2K3P46734 347 aa10.65□□□□□ -0.7
CHD6-207ENST00000476641 MTHFSDQ2M296 383 aaKnown RBP10.65□□□□□ -0.7
CHD6-207ENST00000476641 AMOTQ4VCS5 1084 aa10.65□□□□□ -0.7
CHD6-207ENST00000476641 TMEM259Q4ZIN3 620 aa10.65□□□□□ -0.7
CHD6-207ENST00000476641 C1orf141Q5JVX7 400 aa10.65□□□□□ -0.7
CHD6-207ENST00000476641 SYT17Q9BSW7 474 aa10.65□□□□□ -0.7
CHD6-207ENST00000476641 PCDHB11Q9Y5F2 797 aa10.65□□□□□ -0.7
CHD6-207ENST00000476641 ERVV-2B6SEH9 535 aa10.64□□□□□ -0.71
CHD6-207ENST00000476641 PPP2R1AP30153 589 aa10.64□□□□□ -0.71
CHD6-207ENST00000476641 CABP4P57796 275 aa10.64□□□□□ -0.71
CHD6-207ENST00000476641 NFATC2IPQ8NCF5 419 aa10.64□□□□□ -0.71
CHD6-207ENST00000476641 OSBPL3Q9H4L5 887 aa10.64□□□□□ -0.71
CHD6-207ENST00000476641 GPAMQ9HCL2 828 aa10.64□□□□□ -0.71
CHD6-207ENST00000476641 K7ELQ4 463 aaPredicted RBP10.63□□□□□ -0.71
CHD6-207ENST00000476641 PTCD1O75127 700 aaKnown RBP10.63□□□□□ -0.71
CHD6-207ENST00000476641 NLGN2Q8NFZ4 835 aa10.63□□□□□ -0.71
CHD6-207ENST00000476641 CFHR5Q9BXR6 569 aa10.63□□□□□ -0.71
CHD6-207ENST00000476641 RAB6BQ9NRW1 208 aa10.63□□□□□ -0.71
CHD6-207ENST00000476641 C5P01031 1676 aa10.63□□□□□ -0.71
CHD6-207ENST00000476641 C4BP0C0L5 1744 aa10.62□□□□□ -0.71
CHD6-207ENST00000476641 SHISA8B8ZZ34 492 aa10.62□□□□□ -0.71
CHD6-207ENST00000476641 TRAK2O60296 914 aa10.62□□□□□ -0.71
CHD6-207ENST00000476641 HSP90AB1P08238 724 aaKnown RBP10.62□□□□□ -0.71
CHD6-207ENST00000476641 SLC39A6Q13433 755 aa10.62□□□□□ -0.71
CHD6-207ENST00000476641 AKAP4Q5JQC9 854 aa10.62□□□□□ -0.71
CHD6-207ENST00000476641 MKL2Q9ULH7 1088 aa10.62□□□□□ -0.71
CHD6-207ENST00000476641 PLEKHG2Q9H7P9 1386 aa10.62□□□□□ -0.71
CHD6-207ENST00000476641 KRBA1A5PL33 1030 aa10.61□□□□□ -0.71
CHD6-207ENST00000476641 RNMTO43148 476 aaKnown RBP10.61□□□□□ -0.71
CHD6-207ENST00000476641 THBS1P07996 1170 aa10.61□□□□□ -0.71
CHD6-207ENST00000476641 PHACTR3Q96KR7 559 aa10.61□□□□□ -0.71
CHD6-207ENST00000476641 PCMTD1Q96MG8 357 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms