RNA–Protein interactions for RNA: ENST00000474843.1

SRRM1-210, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-210ENST00000474843 WDR97A6NE52 1622 aa8.4□□□□□ -1.06
SRRM1-210ENST00000474843 TARBP1Q13395 1621 aaKnown RBP8.4□□□□□ -1.06
SRRM1-210ENST00000474843 PTPRAP18433 802 aa8.4□□□□□ -1.06
SRRM1-210ENST00000474843 BAG6P46379 1132 aa8.4□□□□□ -1.06
SRRM1-210ENST00000474843 GRM2Q14416 872 aa8.4□□□□□ -1.06
SRRM1-210ENST00000474843 KIAA0319Q5VV43 1072 aa8.4□□□□□ -1.06
SRRM1-210ENST00000474843 ALG1LQ6GMV1 187 aa8.4□□□□□ -1.06
SRRM1-210ENST00000474843 FBXO33Q7Z6M2 555 aa8.4□□□□□ -1.06
SRRM1-210ENST00000474843 TCF12Q99081 682 aa8.4□□□□□ -1.06
SRRM1-210ENST00000474843 ERCC3P19447 782 aa8.39□□□□□ -1.07
SRRM1-210ENST00000474843 EPHA1P21709 976 aa8.39□□□□□ -1.07
SRRM1-210ENST00000474843 CDC27P30260 824 aa8.39□□□□□ -1.07
SRRM1-210ENST00000474843 GRIA4P48058 902 aa8.39□□□□□ -1.07
SRRM1-210ENST00000474843 SPRED3Q2MJR0 410 aa8.39□□□□□ -1.07
SRRM1-210ENST00000474843 FBF1Q8TES7 1133 aa8.39□□□□□ -1.07
SRRM1-210ENST00000474843 DUSP9Q99956 384 aaKnown RBP8.39□□□□□ -1.07
SRRM1-210ENST00000474843 BCL2L13Q9BXK5 485 aa8.39□□□□□ -1.07
SRRM1-210ENST00000474843 BHLHE41Q9C0J9 482 aaPredicted RBP8.39□□□□□ -1.07
SRRM1-210ENST00000474843 FAM177BA6PVY3 158 aa8.38□□□□□ -1.07
SRRM1-210ENST00000474843 LINC01387J3KSC0 135 aa8.38□□□□□ -1.07
SRRM1-210ENST00000474843 PRPF40AO75400 957 aaKnown RBP8.38□□□□□ -1.07
SRRM1-210ENST00000474843 COL8A1P27658 744 aa8.38□□□□□ -1.07
SRRM1-210ENST00000474843 COL19A1Q14993 1142 aa8.38□□□□□ -1.07
SRRM1-210ENST00000474843 GPAT2Q6NUI2 795 aa8.38□□□□□ -1.07
SRRM1-210ENST00000474843 NXPE4Q6UWF7 544 aa8.38□□□□□ -1.07
SRRM1-210ENST00000474843 CCNJLQ8IV13 435 aa8.38□□□□□ -1.07
SRRM1-210ENST00000474843 GIPC2Q8TF65 315 aa8.38□□□□□ -1.07
SRRM1-210ENST00000474843 BCO2Q9BYV7 579 aa8.38□□□□□ -1.07
SRRM1-210ENST00000474843 MUC3BQ9H195 1237 aa8.38□□□□□ -1.07
SRRM1-210ENST00000474843 CCDC9Q9Y3X0 531 aaKnown RBP8.38□□□□□ -1.07
SRRM1-210ENST00000474843 ABCA10Q8WWZ4 1543 aa8.38□□□□□ -1.07
SRRM1-210ENST00000474843 RAD54L2Q9Y4B4 1467 aa8.38□□□□□ -1.07
SRRM1-210ENST00000474843 PIK3R2O00459 728 aa8.37□□□□□ -1.07
SRRM1-210ENST00000474843 FAM161BQ96MY7 647 aa8.37□□□□□ -1.07
SRRM1-210ENST00000474843 CARD10Q9BWT7 1032 aa8.37□□□□□ -1.07
SRRM1-210ENST00000474843 ABCB6Q9NP58 842 aa8.37□□□□□ -1.07
SRRM1-210ENST00000474843 NOP53Q9NZM5 478 aaKnown RBP8.37□□□□□ -1.07
SRRM1-210ENST00000474843 PPME1Q9Y570 386 aa8.37□□□□□ -1.07
SRRM1-210ENST00000474843 A0A096LPE4 126 aa8.36□□□□□ -1.07
SRRM1-210ENST00000474843 A0A0A0MRY4 1105 aa8.36□□□□□ -1.07
SRRM1-210ENST00000474843 A0A1W2PPZ6 126 aa8.36□□□□□ -1.07
SRRM1-210ENST00000474843 FCGRTP55899 365 aa8.36□□□□□ -1.07
SRRM1-210ENST00000474843 GLIS3Q8NEA6 775 aa8.36□□□□□ -1.07
SRRM1-210ENST00000474843 FOXD4L4Q8WXT5 416 aaPredicted RBP8.36□□□□□ -1.07
SRRM1-210ENST00000474843 BSNDQ8WZ55 320 aa8.36□□□□□ -1.07
SRRM1-210ENST00000474843 ADAM19Q9H013 955 aa8.36□□□□□ -1.07
SRRM1-210ENST00000474843 SOX13Q9UN79 622 aa8.36□□□□□ -1.07
SRRM1-210ENST00000474843 VN1R5Q7Z5H4 357 aa8.35□□□□□ -1.07
SRRM1-210ENST00000474843 SLC7A3Q8WY07 619 aa8.35□□□□□ -1.07
SRRM1-210ENST00000474843 OSBPL7Q9BZF2 842 aa8.35□□□□□ -1.07
SRRM1-210ENST00000474843 PARP2Q9UGN5 583 aa8.35□□□□□ -1.07
SRRM1-210ENST00000474843 TRAK1Q9UPV9 953 aa8.35□□□□□ -1.07
SRRM1-210ENST00000474843 SPG7Q9UQ90 795 aa8.35□□□□□ -1.07
SRRM1-210ENST00000474843 TDRD9Q8NDG6 1382 aaKnown RBP8.35□□□□□ -1.07
SRRM1-210ENST00000474843 SPDYE3A6NKU9 549 aa8.34□□□□□ -1.07
SRRM1-210ENST00000474843 H3BRJ5 948 aa8.34□□□□□ -1.07
SRRM1-210ENST00000474843 GNA15P30679 374 aa8.34□□□□□ -1.07
SRRM1-210ENST00000474843 CABP4P57796 275 aa8.34□□□□□ -1.07
SRRM1-210ENST00000474843 RAC1P63000 192 aa8.34□□□□□ -1.07
SRRM1-210ENST00000474843 TRIM28Q13263 835 aaKnown RBP8.34□□□□□ -1.07
SRRM1-210ENST00000474843 PRRT3Q5FWE3 981 aa8.34□□□□□ -1.07
SRRM1-210ENST00000474843 HGSNATQ68CP4 663 aa8.34□□□□□ -1.07
SRRM1-210ENST00000474843 PRPF40BQ6NWY9 871 aaKnown RBP8.34□□□□□ -1.07
SRRM1-210ENST00000474843 KIF27Q86VH2 1401 aa8.34□□□□□ -1.07
SRRM1-210ENST00000474843 AQRO60306 1485 aaKnown RBP eCLIP8.33□□□□□ -1.081e-7■■■■■ 32.3
SRRM1-210ENST00000474843 GAPVD1Q14C86 1478 aa8.33□□□□□ -1.08
SRRM1-210ENST00000474843 TMEM238LA0A1B0GVL6 79 aa8.33□□□□□ -1.08
SRRM1-210ENST00000474843 DEAF1O75398 565 aaPredicted RBP8.33□□□□□ -1.08
SRRM1-210ENST00000474843 XPCQ01831 940 aaPredicted RBP8.33□□□□□ -1.08
SRRM1-210ENST00000474843 DTHD1Q6ZMT9 781 aa8.33□□□□□ -1.08
SRRM1-210ENST00000474843 ILDR2Q71H61 639 aa8.33□□□□□ -1.08
SRRM1-210ENST00000474843 FMR1NBQ8N0W7 255 aaPredicted RBP8.33□□□□□ -1.08
SRRM1-210ENST00000474843 CACTIN-AS1Q8N1I8 211 aa8.33□□□□□ -1.08
SRRM1-210ENST00000474843 ZNF576Q9H609 170 aa8.33□□□□□ -1.08
SRRM1-210ENST00000474843 C12orf49Q9H741 205 aa8.33□□□□□ -1.08
SRRM1-210ENST00000474843 ZNF608Q9ULD9 1512 aaPredicted RBP8.33□□□□□ -1.08
SRRM1-210ENST00000474843 PSMD2Q13200 908 aa8.32□□□□□ -1.08
SRRM1-210ENST00000474843 IKBKEQ14164 716 aa8.32□□□□□ -1.08
SRRM1-210ENST00000474843 SETDB1Q15047 1291 aa8.32□□□□□ -1.08
SRRM1-210ENST00000474843 GRIK4Q16099 956 aa8.32□□□□□ -1.08
SRRM1-210ENST00000474843 FAM117BQ6P1L5 589 aa8.32□□□□□ -1.08
SRRM1-210ENST00000474843 RGS22Q8NE09 1264 aa8.32□□□□□ -1.08
SRRM1-210ENST00000474843 GRIN2BQ13224 1484 aa8.32□□□□□ -1.08
SRRM1-210ENST00000474843 EIF4G3O43432 1585 aaKnown RBP8.31□□□□□ -1.08
SRRM1-210ENST00000474843 PBRM1Q86U86 1689 aa8.31□□□□□ -1.08
SRRM1-210ENST00000474843 FSCN2O14926 492 aa8.31□□□□□ -1.08
SRRM1-210ENST00000474843 FGD1P98174 961 aa8.31□□□□□ -1.08
SRRM1-210ENST00000474843 PCDH1Q08174 1060 aa8.31□□□□□ -1.08
SRRM1-210ENST00000474843 SHISA2Q6UWI4 295 aa8.31□□□□□ -1.08
SRRM1-210ENST00000474843 GALNT11Q8NCW6 608 aa8.31□□□□□ -1.08
SRRM1-210ENST00000474843 AKAP2Q9Y2D5 859 aa8.31□□□□□ -1.08
SRRM1-210ENST00000474843 ABCA5Q8WWZ7 1642 aa8.31□□□□□ -1.08
SRRM1-210ENST00000474843 EEA1Q15075 1411 aa8.3□□□□□ -1.08
SRRM1-210ENST00000474843 ERICH3Q5RHP9 1530 aa8.3□□□□□ -1.08
SRRM1-210ENST00000474843 USP17L7P0C7H9 530 aa8.3□□□□□ -1.08
SRRM1-210ENST00000474843 SPATA31C1P0DKV0 1188 aa8.3□□□□□ -1.08
SRRM1-210ENST00000474843 ESRRAP11474 423 aaPredicted RBP8.3□□□□□ -1.08
SRRM1-210ENST00000474843 EIF4BP23588 611 aaKnown RBP8.3□□□□□ -1.08
SRRM1-210ENST00000474843 ITPKAP23677 461 aa8.3□□□□□ -1.08
SRRM1-210ENST00000474843 ZNF157P51786 506 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms