RNA–Protein interactions for RNA: ENST00000471474.5

SEMA3A-206, Transcript of semaphorin 3A, humanhuman

TSL 5

Gene SEMA3A, Length 688 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-206ENST00000471474 C1QTNF9BB2RNN3 333 aa8.66□□□□□ -1.02
SEMA3A-206ENST00000471474 MSTNO14793 375 aa8.66□□□□□ -1.02
SEMA3A-206ENST00000471474 P4HBP07237 508 aaKnown RBP8.66□□□□□ -1.02
SEMA3A-206ENST00000471474 GATA4P43694 442 aa8.66□□□□□ -1.02
SEMA3A-206ENST00000471474 XPCQ01831 940 aaPredicted RBP8.66□□□□□ -1.02
SEMA3A-206ENST00000471474 GSTM4Q03013 218 aa8.66□□□□□ -1.02
SEMA3A-206ENST00000471474 SUZ12Q15022 739 aaKnown RBP8.66□□□□□ -1.02
SEMA3A-206ENST00000471474 DUOXA2Q1HG44 320 aa8.66□□□□□ -1.02
SEMA3A-206ENST00000471474 PLA2G4EQ3MJ16 856 aa8.66□□□□□ -1.02
SEMA3A-206ENST00000471474 BCO2Q9BYV7 579 aa8.66□□□□□ -1.02
SEMA3A-206ENST00000471474 CLEC4MQ9H2X3 399 aaPredicted RBP8.66□□□□□ -1.02
SEMA3A-206ENST00000471474 AKAP2Q9Y2D5 859 aa8.66□□□□□ -1.02
SEMA3A-206ENST00000471474 GIPC1O14908 333 aa8.65□□□□□ -1.02
SEMA3A-206ENST00000471474 IGHA1P01876 353 aa8.65□□□□□ -1.02
SEMA3A-206ENST00000471474 IGHA2P01877 340 aa8.65□□□□□ -1.02
SEMA3A-206ENST00000471474 HNRNPUQ00839 825 aaKnown RBP eCLIP8.65□□□□□ -1.02
SEMA3A-206ENST00000471474 SETDB1Q15047 1291 aa8.65□□□□□ -1.02
SEMA3A-206ENST00000471474 SPRED3Q2MJR0 410 aa8.65□□□□□ -1.02
SEMA3A-206ENST00000471474 SHISA2Q6UWI4 295 aa8.65□□□□□ -1.02
SEMA3A-206ENST00000471474 LENG1Q96BZ8 264 aaPredicted RBP8.65□□□□□ -1.02
SEMA3A-206ENST00000471474 FRMD6Q96NE9 622 aa8.65□□□□□ -1.02
SEMA3A-206ENST00000471474 SOX13Q9UN79 622 aa8.65□□□□□ -1.02
SEMA3A-206ENST00000471474 TMEM238LA0A1B0GVL6 79 aa8.64□□□□□ -1.03
SEMA3A-206ENST00000471474 DEAF1O75398 565 aaPredicted RBP8.64□□□□□ -1.03
SEMA3A-206ENST00000471474 XRCC5P13010 732 aaKnown RBP8.64□□□□□ -1.03
SEMA3A-206ENST00000471474 GRIA4P48058 902 aa8.64□□□□□ -1.03
SEMA3A-206ENST00000471474 NLRP12P59046 1061 aa8.64□□□□□ -1.03
SEMA3A-206ENST00000471474 PPP2R3AQ06190 1150 aa8.64□□□□□ -1.03
SEMA3A-206ENST00000471474 PCDH1Q08174 1060 aa8.64□□□□□ -1.03
SEMA3A-206ENST00000471474 GRM2Q14416 872 aa8.64□□□□□ -1.03
SEMA3A-206ENST00000471474 COL19A1Q14993 1142 aa8.64□□□□□ -1.03
SEMA3A-206ENST00000471474 ACAD11Q709F0 780 aa8.64□□□□□ -1.03
SEMA3A-206ENST00000471474 USP26Q9BXU7 913 aa8.64□□□□□ -1.03
SEMA3A-206ENST00000471474 SRCIN1Q9C0H9 1055 aa8.64□□□□□ -1.03
SEMA3A-206ENST00000471474 MRS2Q9HD23 443 aa8.64□□□□□ -1.03
SEMA3A-206ENST00000471474 GPN3Q9UHW5 284 aaPredicted RBP8.64□□□□□ -1.03
SEMA3A-206ENST00000471474 GSTT1P30711 240 aa8.63□□□□□ -1.03
SEMA3A-206ENST00000471474 HP1BP3Q5SSJ5 553 aaPredicted RBP8.63□□□□□ -1.03
SEMA3A-206ENST00000471474 NXPE4Q6UWF7 544 aa8.63□□□□□ -1.03
SEMA3A-206ENST00000471474 PI16Q6UXB8 463 aa8.63□□□□□ -1.03
SEMA3A-206ENST00000471474 CD163Q86VB7 1156 aa8.63□□□□□ -1.03
SEMA3A-206ENST00000471474 KLHDC7BQ96G42 594 aa8.63□□□□□ -1.03
SEMA3A-206ENST00000471474 TCF12Q99081 682 aa8.63□□□□□ -1.03
SEMA3A-206ENST00000471474 SART1O43290 800 aaKnown RBP8.62□□□□□ -1.03
SEMA3A-206ENST00000471474 PRPF40AO75400 957 aaKnown RBP8.62□□□□□ -1.03
SEMA3A-206ENST00000471474 CYP11A1P05108 521 aa8.62□□□□□ -1.03
SEMA3A-206ENST00000471474 CHRNA4P43681 627 aa8.62□□□□□ -1.03
SEMA3A-206ENST00000471474 ZNF326Q5BKZ1 582 aaKnown RBP8.62□□□□□ -1.03
SEMA3A-206ENST00000471474 AKTIPQ9H8T0 292 aa8.62□□□□□ -1.03
SEMA3A-206ENST00000471474 WWC3Q9ULE0 1092 aa8.62□□□□□ -1.03
SEMA3A-206ENST00000471474 DLL1O00548 723 aa8.61□□□□□ -1.03
SEMA3A-206ENST00000471474 SOX1O00570 391 aaPredicted RBP8.61□□□□□ -1.03
SEMA3A-206ENST00000471474 ESRRAP11474 423 aaPredicted RBP8.61□□□□□ -1.03
SEMA3A-206ENST00000471474 SELPP16109 830 aa8.61□□□□□ -1.03
SEMA3A-206ENST00000471474 GLB1P16278 677 aa8.61□□□□□ -1.03
SEMA3A-206ENST00000471474 EIF4BP23588 611 aaKnown RBP8.61□□□□□ -1.03
SEMA3A-206ENST00000471474 PRPF40BQ6NWY9 871 aaKnown RBP8.61□□□□□ -1.03
SEMA3A-206ENST00000471474 VN1R5Q7Z5H4 357 aa8.61□□□□□ -1.03
SEMA3A-206ENST00000471474 CORO1BQ9BR76 489 aa8.61□□□□□ -1.03
SEMA3A-206ENST00000471474 IREB2P48200 963 aaKnown RBP8.6□□□□□ -1.03
SEMA3A-206ENST00000471474 GSK3AP49840 483 aa8.6□□□□□ -1.03
SEMA3A-206ENST00000471474 PTPN12Q05209 780 aaKnown RBP8.6□□□□□ -1.03
SEMA3A-206ENST00000471474 TRIM26Q12899 539 aaPredicted RBP8.6□□□□□ -1.03
SEMA3A-206ENST00000471474 PSMD2Q13200 908 aa8.6□□□□□ -1.03
SEMA3A-206ENST00000471474 TXNRD3Q86VQ6 643 aa8.6□□□□□ -1.03
SEMA3A-206ENST00000471474 GALNT11Q8NCW6 608 aa8.6□□□□□ -1.03
SEMA3A-206ENST00000471474 BCL2L13Q9BXK5 485 aa8.6□□□□□ -1.03
SEMA3A-206ENST00000471474 CEP41Q9BYV8 373 aa8.6□□□□□ -1.03
SEMA3A-206ENST00000471474 RAD18Q9NS91 495 aa8.6□□□□□ -1.03
SEMA3A-206ENST00000471474 ZNF157P51786 506 aaPredicted RBP8.59□□□□□ -1.03
SEMA3A-206ENST00000471474 MFAP1P55081 439 aaKnown RBP8.59□□□□□ -1.03
SEMA3A-206ENST00000471474 FDX2Q6P4F2 183 aa8.59□□□□□ -1.03
SEMA3A-206ENST00000471474 WFDC12Q8WWY7 111 aa8.59□□□□□ -1.03
SEMA3A-206ENST00000471474 DUSP9Q99956 384 aaKnown RBP8.59□□□□□ -1.03
SEMA3A-206ENST00000471474 RUSC1Q9BVN2 902 aa8.59□□□□□ -1.03
SEMA3A-206ENST00000471474 ZNF576Q9H609 170 aa8.59□□□□□ -1.03
SEMA3A-206ENST00000471474 SOX17Q9H6I2 414 aaPredicted RBP8.59□□□□□ -1.03
SEMA3A-206ENST00000471474 ABCB6Q9NP58 842 aa8.59□□□□□ -1.03
SEMA3A-206ENST00000471474 FAM8A1Q9UBU6 413 aa8.59□□□□□ -1.03
SEMA3A-206ENST00000471474 SAMM50Q9Y512 469 aa8.59□□□□□ -1.03
SEMA3A-206ENST00000471474 DDX3YO15523 660 aaKnown RBP8.58□□□□□ -1.04
SEMA3A-206ENST00000471474 ITPKAP23677 461 aa8.58□□□□□ -1.04
SEMA3A-206ENST00000471474 GNA15P30679 374 aa8.58□□□□□ -1.04
SEMA3A-206ENST00000471474 MBTPS1Q14703 1052 aa8.58□□□□□ -1.04
SEMA3A-206ENST00000471474 RPS26P11Q5JNZ5 115 aaPredicted RBP8.58□□□□□ -1.04
SEMA3A-206ENST00000471474 NUTM2GQ5VZR2 741 aa8.58□□□□□ -1.04
SEMA3A-206ENST00000471474 ADAMTSL4Q6UY14 1074 aa8.58□□□□□ -1.04
SEMA3A-206ENST00000471474 SETDB2Q96T68 719 aa8.58□□□□□ -1.04
SEMA3A-206ENST00000471474 C12orf49Q9H741 205 aa8.58□□□□□ -1.04
SEMA3A-206ENST00000471474 LMNB1P20700 586 aa8.57□□□□□ -1.04
SEMA3A-206ENST00000471474 ADGRE1Q14246 886 aa8.57□□□□□ -1.04
SEMA3A-206ENST00000471474 PDE3AQ14432 1141 aa8.57□□□□□ -1.04
SEMA3A-206ENST00000471474 POU4F3Q15319 338 aa8.57□□□□□ -1.04
SEMA3A-206ENST00000471474 DNAJC14Q6Y2X3 702 aaPredicted RBP8.57□□□□□ -1.04
SEMA3A-206ENST00000471474 SPOCK3Q9BQ16 436 aa8.57□□□□□ -1.04
SEMA3A-206ENST00000471474 CEP44Q9C0F1 390 aa8.57□□□□□ -1.04
SEMA3A-206ENST00000471474 RNF208Q9H0X6 261 aa8.57□□□□□ -1.04
SEMA3A-206ENST00000471474 CYP4F12Q9HCS2 524 aa8.57□□□□□ -1.04
SEMA3A-206ENST00000471474 TTF2Q9UNY4 1162 aaKnown RBP8.57□□□□□ -1.04
SEMA3A-206ENST00000471474 ALX3O95076 343 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms