RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 A0A1W2PPZ6 126 aa7.15□□□□□ -1.26
GPNMB-207ENST00000468723 PATL2C9JE40 543 aaKnown RBP7.15□□□□□ -1.26
GPNMB-207ENST00000468723 SOX1O00570 391 aaPredicted RBP7.15□□□□□ -1.26
GPNMB-207ENST00000468723 TM4SF5O14894 197 aa7.15□□□□□ -1.26
GPNMB-207ENST00000468723 ADAM11O75078 769 aa7.15□□□□□ -1.26
GPNMB-207ENST00000468723 NLRP12P59046 1061 aa7.15□□□□□ -1.26
GPNMB-207ENST00000468723 PIP4K2BP78356 416 aa7.15□□□□□ -1.26
GPNMB-207ENST00000468723 IKBKEQ14164 716 aa7.15□□□□□ -1.26
GPNMB-207ENST00000468723 KIAA0319Q5VV43 1072 aa7.15□□□□□ -1.26
GPNMB-207ENST00000468723 ACAD11Q709F0 780 aa7.15□□□□□ -1.26
GPNMB-207ENST00000468723 CCNJLQ8IV13 435 aa7.15□□□□□ -1.26
GPNMB-207ENST00000468723 KLHL23Q8NBE8 558 aa7.15□□□□□ -1.26
GPNMB-207ENST00000468723 FOXD4L4Q8WXT5 416 aaPredicted RBP7.15□□□□□ -1.26
GPNMB-207ENST00000468723 TP53INP1Q96A56 240 aa7.15□□□□□ -1.26
GPNMB-207ENST00000468723 DNAJC25Q9H1X3 360 aa7.15□□□□□ -1.26
GPNMB-207ENST00000468723 AKTIPQ9H8T0 292 aa7.15□□□□□ -1.26
GPNMB-207ENST00000468723 F8W735 103 aaPredicted RBP7.14□□□□□ -1.27
GPNMB-207ENST00000468723 ARL4DP49703 201 aa7.14□□□□□ -1.27
GPNMB-207ENST00000468723 DSC3Q14574 896 aa7.14□□□□□ -1.27
GPNMB-207ENST00000468723 SUZ12Q15022 739 aaKnown RBP7.14□□□□□ -1.27
GPNMB-207ENST00000468723 DUOXA2Q1HG44 320 aa7.14□□□□□ -1.27
GPNMB-207ENST00000468723 PI16Q6UXB8 463 aa7.14□□□□□ -1.27
GPNMB-207ENST00000468723 DCAF11Q8TEB1 546 aa7.14□□□□□ -1.27
GPNMB-207ENST00000468723 UBASH3BQ8TF42 649 aa7.14□□□□□ -1.27
GPNMB-207ENST00000468723 MEGF10Q96KG7 1140 aa7.14□□□□□ -1.27
GPNMB-207ENST00000468723 PNMA6FA0A0J9YX94 578 aa7.13□□□□□ -1.27
GPNMB-207ENST00000468723 K7ELQ4 463 aaPredicted RBP7.13□□□□□ -1.27
GPNMB-207ENST00000468723 TREHO43280 583 aa7.13□□□□□ -1.27
GPNMB-207ENST00000468723 GLB1P16278 677 aa7.13□□□□□ -1.27
GPNMB-207ENST00000468723 MAPK8P45983 427 aa7.13□□□□□ -1.27
GPNMB-207ENST00000468723 C19orf57Q0VDD7 668 aa7.13□□□□□ -1.27
GPNMB-207ENST00000468723 RSPO4Q2I0M5 234 aaPredicted RBP7.13□□□□□ -1.27
GPNMB-207ENST00000468723 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.13□□□□□ -1.27
GPNMB-207ENST00000468723 ZSCAN29Q8IWY8 852 aaPredicted RBP7.13□□□□□ -1.27
GPNMB-207ENST00000468723 TMEM130Q8N3G9 435 aa7.13□□□□□ -1.27
GPNMB-207ENST00000468723 SEMA6BQ9H3T3 888 aa7.13□□□□□ -1.27
GPNMB-207ENST00000468723 OSGEPQ9NPF4 335 aa7.13□□□□□ -1.27
GPNMB-207ENST00000468723 ADAM23O75077 832 aa7.12□□□□□ -1.27
GPNMB-207ENST00000468723 ESRRAP11474 423 aaPredicted RBP7.12□□□□□ -1.27
GPNMB-207ENST00000468723 GSTM4Q03013 218 aa7.12□□□□□ -1.27
GPNMB-207ENST00000468723 WNT8BQ93098 351 aa7.12□□□□□ -1.27
GPNMB-207ENST00000468723 SETDB2Q96T68 719 aa7.12□□□□□ -1.27
GPNMB-207ENST00000468723 PCDH1Q08174 1060 aa7.11□□□□□ -1.27
GPNMB-207ENST00000468723 NKAPLQ5M9Q1 402 aa7.11□□□□□ -1.27
GPNMB-207ENST00000468723 KIAA1211Q6ZU35 1233 aa7.11□□□□□ -1.27
GPNMB-207ENST00000468723 ASB16Q96NS5 453 aa7.11□□□□□ -1.27
GPNMB-207ENST00000468723 SSBP4Q9BWG4 385 aaPredicted RBP7.11□□□□□ -1.27
GPNMB-207ENST00000468723 NLRP2Q9NX02 1062 aa7.11□□□□□ -1.27
GPNMB-207ENST00000468723 WWC3Q9ULE0 1092 aa7.11□□□□□ -1.27
GPNMB-207ENST00000468723 GRM2Q14416 872 aa7.1□□□□□ -1.27
GPNMB-207ENST00000468723 ENOX2Q16206 610 aaKnown RBP7.1□□□□□ -1.27
GPNMB-207ENST00000468723 ZNF423Q2M1K9 1284 aa7.1□□□□□ -1.27
GPNMB-207ENST00000468723 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.1□□□□□ -1.27
GPNMB-207ENST00000468723 SND1Q7KZF4 910 aaKnown RBP eCLIP7.1□□□□□ -1.27
GPNMB-207ENST00000468723 USP26Q9BXU7 913 aa7.1□□□□□ -1.27
GPNMB-207ENST00000468723 CLEC4MQ9H2X3 399 aaPredicted RBP7.1□□□□□ -1.27
GPNMB-207ENST00000468723 UBL7Q96S82 380 aaPredicted RBP7.09□□□□□ -1.27
GPNMB-207ENST00000468723 ABCB6Q9NP58 842 aa7.09□□□□□ -1.27
GPNMB-207ENST00000468723 TMEM238LA0A1B0GVL6 79 aa7.08□□□□□ -1.28
GPNMB-207ENST00000468723 DYRK3O43781 588 aa7.08□□□□□ -1.28
GPNMB-207ENST00000468723 ZNF157P51786 506 aaPredicted RBP7.08□□□□□ -1.28
GPNMB-207ENST00000468723 FCGRTP55899 365 aa7.08□□□□□ -1.28
GPNMB-207ENST00000468723 DZIP1LQ8IYY4 767 aaKnown RBP7.08□□□□□ -1.28
GPNMB-207ENST00000468723 GLIS3Q8NEA6 775 aa7.08□□□□□ -1.28
GPNMB-207ENST00000468723 RUSC1Q9BVN2 902 aa7.08□□□□□ -1.28
GPNMB-207ENST00000468723 BCO2Q9BYV7 579 aa7.08□□□□□ -1.28
GPNMB-207ENST00000468723 ZNF576Q9H609 170 aa7.08□□□□□ -1.28
GPNMB-207ENST00000468723 PODXL2Q9NZ53 605 aa7.08□□□□□ -1.28
GPNMB-207ENST00000468723 ITPKAP23677 461 aa7.07□□□□□ -1.28
GPNMB-207ENST00000468723 FMR1Q06787 632 aaKnown RBP eCLIP7.07□□□□□ -1.28
GPNMB-207ENST00000468723 NXPE4Q6UWF7 544 aa7.07□□□□□ -1.28
GPNMB-207ENST00000468723 SOX17Q9H6I2 414 aaPredicted RBP7.07□□□□□ -1.28
GPNMB-207ENST00000468723 TRAK1Q9UPV9 953 aa7.07□□□□□ -1.28
GPNMB-207ENST00000468723 LOC100289279A0A1B0GTE1 492 aa7.06□□□□□ -1.28
GPNMB-207ENST00000468723 DLGAP3O95886 979 aa7.06□□□□□ -1.28
GPNMB-207ENST00000468723 P4HBP07237 508 aaKnown RBP7.06□□□□□ -1.28
GPNMB-207ENST00000468723 ITGB7P26010 798 aa7.06□□□□□ -1.28
GPNMB-207ENST00000468723 PRPF40BQ6NWY9 871 aaKnown RBP7.06□□□□□ -1.28
GPNMB-207ENST00000468723 DTHD1Q6ZMT9 781 aa7.06□□□□□ -1.28
GPNMB-207ENST00000468723 Q6ZS46 218 aa7.06□□□□□ -1.28
GPNMB-207ENST00000468723 RNF208Q9H0X6 261 aa7.06□□□□□ -1.28
GPNMB-207ENST00000468723 GZF1Q9H116 711 aaPredicted RBP7.06□□□□□ -1.28
GPNMB-207ENST00000468723 PPP4R2Q9NY27 417 aa7.06□□□□□ -1.28
GPNMB-207ENST00000468723 NISCHQ9Y2I1 1504 aa7.06□□□□□ -1.28
GPNMB-207ENST00000468723 SART1O43290 800 aaKnown RBP7.05□□□□□ -1.28
GPNMB-207ENST00000468723 CEP41Q9BYV8 373 aa7.05□□□□□ -1.28
GPNMB-207ENST00000468723 ANKRD33BA6NCL7 494 aa7.04□□□□□ -1.28
GPNMB-207ENST00000468723 ECEL1O95672 775 aa7.04□□□□□ -1.28
GPNMB-207ENST00000468723 B3GALT4O96024 378 aa7.04□□□□□ -1.28
GPNMB-207ENST00000468723 CTSBP07858 339 aa7.04□□□□□ -1.28
GPNMB-207ENST00000468723 H2AFB1P0C5Y9 115 aa7.04□□□□□ -1.28
GPNMB-207ENST00000468723 H2AFB2P0C5Z0 115 aa7.04□□□□□ -1.28
GPNMB-207ENST00000468723 MAOBP27338 520 aa7.04□□□□□ -1.28
GPNMB-207ENST00000468723 ATP2B2Q01814 1243 aa7.04□□□□□ -1.28
GPNMB-207ENST00000468723 FAAP100Q0VG06 881 aa7.04□□□□□ -1.28
GPNMB-207ENST00000468723 POU4F3Q15319 338 aa7.04□□□□□ -1.28
GPNMB-207ENST00000468723 FDX2Q6P4F2 183 aa7.04□□□□□ -1.28
GPNMB-207ENST00000468723 ARMC10Q8N2F6 343 aa7.04□□□□□ -1.28
GPNMB-207ENST00000468723 AKAP2Q9Y2D5 859 aa7.04□□□□□ -1.28
GPNMB-207ENST00000468723 LDHBP07195 334 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms