RNA–Protein interactions for RNA: ENST00000466704.1

CALD1-214, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 903 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-214ENST00000466704 ITGB2P05107 769 aa6.96□□□□□ -1.3
CALD1-214ENST00000466704 GRIA4P48058 902 aa6.96□□□□□ -1.3
CALD1-214ENST00000466704 FGD1P98174 961 aa6.96□□□□□ -1.3
CALD1-214ENST00000466704 IKBKEQ14164 716 aa6.96□□□□□ -1.3
CALD1-214ENST00000466704 GRM2Q14416 872 aa6.96□□□□□ -1.3
CALD1-214ENST00000466704 SPOCK3Q9BQ16 436 aa6.96□□□□□ -1.3
CALD1-214ENST00000466704 CARD10Q9BWT7 1032 aa6.96□□□□□ -1.3
CALD1-214ENST00000466704 SEC31BQ9NQW1 1179 aa6.96□□□□□ -1.3
CALD1-214ENST00000466704 USP21Q9UK80 565 aa6.96□□□□□ -1.3
CALD1-214ENST00000466704 C9orf172C9J069 976 aa6.95□□□□□ -1.3
CALD1-214ENST00000466704 PIP4K2BP78356 416 aa6.95□□□□□ -1.3
CALD1-214ENST00000466704 SPRED3Q2MJR0 410 aa6.95□□□□□ -1.3
CALD1-214ENST00000466704 IGF2-ASQ6U949 168 aa6.95□□□□□ -1.3
CALD1-214ENST00000466704 SHISA2Q6UWI4 295 aa6.95□□□□□ -1.3
CALD1-214ENST00000466704 VN1R5Q7Z5H4 357 aa6.95□□□□□ -1.3
CALD1-214ENST00000466704 NPAS4Q8IUM7 802 aa6.95□□□□□ -1.3
CALD1-214ENST00000466704 KLHL23Q8NBE8 558 aa6.95□□□□□ -1.3
CALD1-214ENST00000466704 WNT8BQ93098 351 aa6.95□□□□□ -1.3
CALD1-214ENST00000466704 BCO2Q9BYV7 579 aa6.95□□□□□ -1.3
CALD1-214ENST00000466704 SPG7Q9UQ90 795 aa6.95□□□□□ -1.3
CALD1-214ENST00000466704 C1QTNF9BB2RNN3 333 aa6.94□□□□□ -1.3
CALD1-214ENST00000466704 CHRNA4P43681 627 aa6.94□□□□□ -1.3
CALD1-214ENST00000466704 MFAP1P55081 439 aaKnown RBP6.94□□□□□ -1.3
CALD1-214ENST00000466704 FCGRTP55899 365 aa6.94□□□□□ -1.3
CALD1-214ENST00000466704 NRG1Q02297 640 aaPredicted RBP6.94□□□□□ -1.3
CALD1-214ENST00000466704 PRPF40BQ6NWY9 871 aaKnown RBP6.94□□□□□ -1.3
CALD1-214ENST00000466704 NXPE4Q6UWF7 544 aa6.94□□□□□ -1.3
CALD1-214ENST00000466704 DTHD1Q6ZMT9 781 aa6.94□□□□□ -1.3
CALD1-214ENST00000466704 KRTAP4-8Q9BYQ9 185 aa6.94□□□□□ -1.3
CALD1-214ENST00000466704 CLEC4MQ9H2X3 399 aaPredicted RBP6.94□□□□□ -1.3
CALD1-214ENST00000466704 ABCB6Q9NP58 842 aa6.94□□□□□ -1.3
CALD1-214ENST00000466704 OSGEPQ9NPF4 335 aa6.94□□□□□ -1.3
CALD1-214ENST00000466704 TMEM238LA0A1B0GVL6 79 aa6.93□□□□□ -1.3
CALD1-214ENST00000466704 DLL1O00548 723 aa6.93□□□□□ -1.3
CALD1-214ENST00000466704 PRPF40AO75400 957 aaKnown RBP6.93□□□□□ -1.3
CALD1-214ENST00000466704 PROCP04070 461 aa6.93□□□□□ -1.3
CALD1-214ENST00000466704 SELPP16109 830 aa6.93□□□□□ -1.3
CALD1-214ENST00000466704 CD68P34810 354 aaPredicted RBP6.93□□□□□ -1.3
CALD1-214ENST00000466704 PCDH1Q08174 1060 aa6.93□□□□□ -1.3
CALD1-214ENST00000466704 C19orf57Q0VDD7 668 aa6.93□□□□□ -1.3
CALD1-214ENST00000466704 CD163Q86VB7 1156 aa6.93□□□□□ -1.3
CALD1-214ENST00000466704 GALNT11Q8NCW6 608 aa6.93□□□□□ -1.3
CALD1-214ENST00000466704 GLIS3Q8NEA6 775 aa6.93□□□□□ -1.3
CALD1-214ENST00000466704 KLHDC7BQ96G42 594 aa6.93□□□□□ -1.3
CALD1-214ENST00000466704 SOX1O00570 391 aaPredicted RBP6.92□□□□□ -1.3
CALD1-214ENST00000466704 ESRRAP11474 423 aaPredicted RBP6.92□□□□□ -1.3
CALD1-214ENST00000466704 ITPKAP23677 461 aa6.92□□□□□ -1.3
CALD1-214ENST00000466704 LENG1Q96BZ8 264 aaPredicted RBP6.92□□□□□ -1.3
CALD1-214ENST00000466704 SRCIN1Q9C0H9 1055 aa6.92□□□□□ -1.3
CALD1-214ENST00000466704 MRPL18Q9H0U6 180 aaKnown RBP6.92□□□□□ -1.3
CALD1-214ENST00000466704 ZNF576Q9H609 170 aa6.92□□□□□ -1.3
CALD1-214ENST00000466704 NISCHQ9Y2I1 1504 aa6.91□□□□□ -1.3
CALD1-214ENST00000466704 GIPC1O14908 333 aa6.91□□□□□ -1.3
CALD1-214ENST00000466704 NLRP12P59046 1061 aa6.91□□□□□ -1.3
CALD1-214ENST00000466704 GSTM4Q03013 218 aa6.91□□□□□ -1.3
CALD1-214ENST00000466704 PTPN12Q05209 780 aaKnown RBP6.91□□□□□ -1.3
CALD1-214ENST00000466704 FOXD4L6Q3SYB3 417 aaPredicted RBP6.91□□□□□ -1.3
CALD1-214ENST00000466704 FOXD4L3Q6VB84 417 aaPredicted RBP6.91□□□□□ -1.3
CALD1-214ENST00000466704 FRMD6Q96NE9 622 aa6.91□□□□□ -1.3
CALD1-214ENST00000466704 DUSP9Q99956 384 aaKnown RBP6.91□□□□□ -1.3
CALD1-214ENST00000466704 ZFYVE1Q9HBF4 777 aa6.91□□□□□ -1.3
CALD1-214ENST00000466704 AKAP2Q9Y2D5 859 aa6.91□□□□□ -1.3
CALD1-214ENST00000466704 DDX3YO15523 660 aaKnown RBP6.9□□□□□ -1.3
CALD1-214ENST00000466704 XRCC5P13010 732 aaKnown RBP6.9□□□□□ -1.3
CALD1-214ENST00000466704 GNA15P30679 374 aa6.9□□□□□ -1.3
CALD1-214ENST00000466704 XPCQ01831 940 aaPredicted RBP6.9□□□□□ -1.3
CALD1-214ENST00000466704 DUOXA2Q1HG44 320 aa6.9□□□□□ -1.3
CALD1-214ENST00000466704 HGSNATQ68CP4 663 aa6.9□□□□□ -1.3
CALD1-214ENST00000466704 DDX54Q8TDD1 881 aaKnown RBP6.9□□□□□ -1.3
CALD1-214ENST00000466704 SOX17Q9H6I2 414 aaPredicted RBP6.9□□□□□ -1.3
CALD1-214ENST00000466704 C12orf49Q9H741 205 aa6.9□□□□□ -1.3
CALD1-214ENST00000466704 EIF4EBP3O60516 100 aaPredicted RBP6.89□□□□□ -1.31
CALD1-214ENST00000466704 EIF4BP23588 611 aaKnown RBP6.89□□□□□ -1.31
CALD1-214ENST00000466704 GSTT1P30711 240 aa6.89□□□□□ -1.31
CALD1-214ENST00000466704 GATA4P43694 442 aa6.89□□□□□ -1.31
CALD1-214ENST00000466704 ADGRE1Q14246 886 aa6.89□□□□□ -1.31
CALD1-214ENST00000466704 MBTPS1Q14703 1052 aa6.89□□□□□ -1.31
CALD1-214ENST00000466704 ZNF423Q2M1K9 1284 aa6.89□□□□□ -1.31
CALD1-214ENST00000466704 RPS26P11Q5JNZ5 115 aaPredicted RBP6.89□□□□□ -1.31
CALD1-214ENST00000466704 ACAD11Q709F0 780 aa6.89□□□□□ -1.31
CALD1-214ENST00000466704 FBXO33Q7Z6M2 555 aa6.89□□□□□ -1.31
CALD1-214ENST00000466704 BCL2L13Q9BXK5 485 aa6.89□□□□□ -1.31
CALD1-214ENST00000466704 OSBPL7Q9BZF2 842 aa6.89□□□□□ -1.31
CALD1-214ENST00000466704 KCNK4Q9NYG8 393 aa6.89□□□□□ -1.31
CALD1-214ENST00000466704 PARP2Q9UGN5 583 aa6.89□□□□□ -1.31
CALD1-214ENST00000466704 GPN3Q9UHW5 284 aaPredicted RBP6.89□□□□□ -1.31
CALD1-214ENST00000466704 ADAM11O75078 769 aa6.88□□□□□ -1.31
CALD1-214ENST00000466704 ZNF157P51786 506 aaPredicted RBP6.88□□□□□ -1.31
CALD1-214ENST00000466704 TXNRD3Q86VQ6 643 aa6.88□□□□□ -1.31
CALD1-214ENST00000466704 FOXD4L4Q8WXT5 416 aaPredicted RBP6.88□□□□□ -1.31
CALD1-214ENST00000466704 USP26Q9BXU7 913 aa6.88□□□□□ -1.31
CALD1-214ENST00000466704 AKTIPQ9H8T0 292 aa6.88□□□□□ -1.31
CALD1-214ENST00000466704 FAM8A1Q9UBU6 413 aa6.88□□□□□ -1.31
CALD1-214ENST00000466704 F8W735 103 aaPredicted RBP6.87□□□□□ -1.31
CALD1-214ENST00000466704 TM4SF5O14894 197 aa6.87□□□□□ -1.31
CALD1-214ENST00000466704 WISP1O95388 367 aa6.87□□□□□ -1.31
CALD1-214ENST00000466704 B3GALT4O96024 378 aa6.87□□□□□ -1.31
CALD1-214ENST00000466704 USP17L7P0C7H9 530 aa6.87□□□□□ -1.31
CALD1-214ENST00000466704 IREB2P48200 963 aaKnown RBP6.87□□□□□ -1.31
CALD1-214ENST00000466704 PSMD2Q13200 908 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms