RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 CARMIL3Q8ND23 1372 aa12.21□□□□□ -0.45
UFD1-206ENST00000466373 GOLGA8BA8MQT2 603 aa12.21□□□□□ -0.45
UFD1-206ENST00000466373 SLC9C2Q5TAH2 1124 aa12.21□□□□□ -0.45
UFD1-206ENST00000466373 ILDR1Q86SU0 546 aaPredicted RBP12.21□□□□□ -0.45
UFD1-206ENST00000466373 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.21□□□□□ -0.457e-8■□□□□ 8.2
UFD1-206ENST00000466373 ZNF274Q96GC6 653 aaPredicted RBP12.21□□□□□ -0.45
UFD1-206ENST00000466373 TRIM5Q9C035 493 aa12.21□□□□□ -0.45
UFD1-206ENST00000466373 CTNNA3Q9UI47 895 aa12.21□□□□□ -0.45
UFD1-206ENST00000466373 KIF3AQ9Y496 699 aa12.21□□□□□ -0.45
UFD1-206ENST00000466373 ZNF213O14771 459 aa12.21□□□□□ -0.46
UFD1-206ENST00000466373 RXRAP19793 462 aa12.21□□□□□ -0.46
UFD1-206ENST00000466373 PTGS1P23219 599 aa12.21□□□□□ -0.46
UFD1-206ENST00000466373 LRRFIP1Q32MZ4 808 aaKnown RBP12.21□□□□□ -0.46
UFD1-206ENST00000466373 RALYLQ86SE5 291 aaKnown RBP12.21□□□□□ -0.46
UFD1-206ENST00000466373 NKX2-3Q8TAU0 364 aa12.21□□□□□ -0.46
UFD1-206ENST00000466373 TEX13AQ9BXU3 409 aaPredicted RBP12.21□□□□□ -0.46
UFD1-206ENST00000466373 PAPPAQ13219 1627 aa12.21□□□□□ -0.46
UFD1-206ENST00000466373 SALL1Q9NSC2 1324 aa12.21□□□□□ -0.46
UFD1-206ENST00000466373 ANKRD18BA2A2Z9 1011 aa12.2□□□□□ -0.46
UFD1-206ENST00000466373 ZFYP08048 801 aaPredicted RBP12.2□□□□□ -0.46
UFD1-206ENST00000466373 CTSWP56202 376 aa12.2□□□□□ -0.46
UFD1-206ENST00000466373 NRBP1Q9UHY1 535 aa12.2□□□□□ -0.46
UFD1-206ENST00000466373 RCOR1Q9UKL0 485 aa12.2□□□□□ -0.46
UFD1-206ENST00000466373 RIC1Q4ADV7 1423 aa12.2□□□□□ -0.46
UFD1-206ENST00000466373 RRP9O43818 475 aaKnown RBP12.19□□□□□ -0.46
UFD1-206ENST00000466373 CYP19A1P11511 503 aaPredicted RBP12.19□□□□□ -0.46
UFD1-206ENST00000466373 PHKA1P46020 1223 aa12.19□□□□□ -0.46
UFD1-206ENST00000466373 ANTXR2P58335 489 aa12.19□□□□□ -0.46
UFD1-206ENST00000466373 RBM43Q6ZSC3 357 aaKnown RBP12.19□□□□□ -0.46
UFD1-206ENST00000466373 TSC1Q92574 1164 aa12.19□□□□□ -0.46
UFD1-206ENST00000466373 ARID3AQ99856 593 aa12.19□□□□□ -0.46
UFD1-206ENST00000466373 PLA2G12BQ9BX93 195 aa12.19□□□□□ -0.46
UFD1-206ENST00000466373 PIH1D3Q9NQM4 214 aaKnown RBP12.19□□□□□ -0.46
UFD1-206ENST00000466373 CPLX1O14810 134 aa12.19□□□□□ -0.46
UFD1-206ENST00000466373 CCDC73Q6ZRK6 1079 aa12.19□□□□□ -0.46
UFD1-206ENST00000466373 MB21D2Q8IYB1 491 aaPredicted RBP12.19□□□□□ -0.46
UFD1-206ENST00000466373 VSIG10Q8N0Z9 540 aa12.19□□□□□ -0.46
UFD1-206ENST00000466373 FSIP1Q8NA03 581 aa12.19□□□□□ -0.46
UFD1-206ENST00000466373 INCENPQ9NQS7 918 aa12.19□□□□□ -0.46
UFD1-206ENST00000466373 LRMPQ12912 555 aa12.19□□□□□ -0.46
UFD1-206ENST00000466373 C11orf57Q6ZUT1 292 aaPredicted RBP12.19□□□□□ -0.46
UFD1-206ENST00000466373 CCDC186Q7Z3E2 898 aa12.19□□□□□ -0.46
UFD1-206ENST00000466373 NCOA7Q8NI08 942 aa12.19□□□□□ -0.46
UFD1-206ENST00000466373 C8orf76Q96K31 380 aa12.19□□□□□ -0.46
UFD1-206ENST00000466373 ZNF396Q96N95 335 aaPredicted RBP12.19□□□□□ -0.46
UFD1-206ENST00000466373 ORC3Q9UBD5 711 aaPredicted RBP12.19□□□□□ -0.46
UFD1-206ENST00000466373 FBXO3Q9UK99 471 aa12.19□□□□□ -0.46
UFD1-206ENST00000466373 NWD2Q9ULI1 1742 aa12.19□□□□□ -0.46
UFD1-206ENST00000466373 A0A1B0GVL5 298 aa12.18□□□□□ -0.46
UFD1-206ENST00000466373 TERF1P54274 439 aa12.18□□□□□ -0.46
UFD1-206ENST00000466373 SNW1Q13573 536 aaKnown RBP12.18□□□□□ -0.46
UFD1-206ENST00000466373 CCDC144CPQ8IYA2 1237 aa12.18□□□□□ -0.46
UFD1-206ENST00000466373 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.18□□□□□ -0.462e-14■□□□□ 11.2
UFD1-206ENST00000466373 HPS5Q9UPZ3 1129 aa12.18□□□□□ -0.46
UFD1-206ENST00000466373 GOLGA6L6A8MZA4 724 aa12.18□□□□□ -0.46
UFD1-206ENST00000466373 KINO60870 393 aaKnown RBP12.18□□□□□ -0.46
UFD1-206ENST00000466373 DZIP3Q86Y13 1208 aaKnown RBP12.18□□□□□ -0.46
UFD1-206ENST00000466373 NBPF3Q9H094 633 aa12.18□□□□□ -0.46
UFD1-206ENST00000466373 WWC3Q9ULE0 1092 aa12.18□□□□□ -0.46
UFD1-206ENST00000466373 CLIC4Q9Y696 253 aa12.18□□□□□ -0.46
UFD1-206ENST00000466373 MYO5AQ9Y4I1 1855 aaKnown RBP12.17□□□□□ -0.46
UFD1-206ENST00000466373 PDE8BO95263 885 aa12.17□□□□□ -0.46
UFD1-206ENST00000466373 ADD2P35612 726 aa12.17□□□□□ -0.46
UFD1-206ENST00000466373 SF3A1Q15459 793 aaKnown RBP12.17□□□□□ -0.46
UFD1-206ENST00000466373 CCDC102BQ68D86 513 aa12.17□□□□□ -0.46
UFD1-206ENST00000466373 TBC1D10CQ8IV04 446 aa12.17□□□□□ -0.46
UFD1-206ENST00000466373 AIFM3Q96NN9 605 aa12.17□□□□□ -0.46
UFD1-206ENST00000466373 PCDHA7Q9UN72 937 aa12.17□□□□□ -0.46
UFD1-206ENST00000466373 UBN2Q6ZU65 1347 aa12.17□□□□□ -0.46
UFD1-206ENST00000466373 ZNF532Q9HCE3 1301 aa12.17□□□□□ -0.46
UFD1-206ENST00000466373 STK11IPQ8N1F8 1099 aa12.17□□□□□ -0.46
UFD1-206ENST00000466373 KIAA1524Q8TCG1 905 aa12.17□□□□□ -0.46
UFD1-206ENST00000466373 SENP2Q9HC62 589 aa12.17□□□□□ -0.46
UFD1-206ENST00000466373 TRDNQ13061 729 aa12.17□□□□□ -0.46
UFD1-206ENST00000466373 VGLL2Q8N8G2 317 aa12.17□□□□□ -0.46
UFD1-206ENST00000466373 ABCA3Q99758 1704 aa12.16□□□□□ -0.46
UFD1-206ENST00000466373 B4E1Z4 1266 aa12.16□□□□□ -0.46
UFD1-206ENST00000466373 GOLGA6L19H0YKK7 550 aa12.16□□□□□ -0.46
UFD1-206ENST00000466373 EXOC5O00471 708 aa12.16□□□□□ -0.46
UFD1-206ENST00000466373 ZNF75DP51815 510 aa12.16□□□□□ -0.46
UFD1-206ENST00000466373 STK38Q15208 465 aa12.16□□□□□ -0.46
UFD1-206ENST00000466373 CDHR2Q9BYE9 1310 aa12.16□□□□□ -0.46
UFD1-206ENST00000466373 SPEF2Q9C093 1822 aa12.16□□□□□ -0.46
UFD1-206ENST00000466373 ITGB4P16144 1822 aa12.16□□□□□ -0.46
UFD1-206ENST00000466373 EVCP57679 992 aa12.16□□□□□ -0.46
UFD1-206ENST00000466373 FAM160A1Q05DH4 1040 aa12.16□□□□□ -0.46
UFD1-206ENST00000466373 CYB5R4Q7L1T6 521 aa12.16□□□□□ -0.46
UFD1-206ENST00000466373 TICAM2Q86XR7 235 aa12.16□□□□□ -0.46
UFD1-206ENST00000466373 KLHL34Q8N239 644 aa12.16□□□□□ -0.46
UFD1-206ENST00000466373 TDRD7Q8NHU6 1098 aaKnown RBP12.16□□□□□ -0.46
UFD1-206ENST00000466373 SDF4Q9BRK5 362 aa12.16□□□□□ -0.46
UFD1-206ENST00000466373 MYL10Q9BUA6 226 aa12.16□□□□□ -0.46
UFD1-206ENST00000466373 AKAP11Q9UKA4 1901 aa12.16□□□□□ -0.46
UFD1-206ENST00000466373 KIF28PB7ZC32 967 aa12.15□□□□□ -0.46
UFD1-206ENST00000466373 PDE8AO60658 829 aa12.15□□□□□ -0.46
UFD1-206ENST00000466373 PDE6AP16499 860 aa12.15□□□□□ -0.46
UFD1-206ENST00000466373 MICU3Q86XE3 530 aa12.15□□□□□ -0.46
UFD1-206ENST00000466373 ENGASEQ8NFI3 743 aa12.15□□□□□ -0.46
UFD1-206ENST00000466373 FBXO18Q8NFZ0 1043 aa12.15□□□□□ -0.46
UFD1-206ENST00000466373 PHKBQ93100 1093 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms