RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 LMBR1LQ6UX01 489 aa7.4□□□□□ -1.22
CHMP3-206ENST00000466032 TMC4Q7Z404 712 aa7.4□□□□□ -1.22
CHMP3-206ENST00000466032 TICAM2Q86XR7 235 aa7.4□□□□□ -1.22
CHMP3-206ENST00000466032 SIRT2Q8IXJ6 389 aa7.4□□□□□ -1.22
CHMP3-206ENST00000466032 CLASRPQ8N2M8 674 aaKnown RBP7.4□□□□□ -1.22
CHMP3-206ENST00000466032 IRF7Q92985 503 aa7.4□□□□□ -1.22
CHMP3-206ENST00000466032 FAM89AQ96GI7 184 aa7.4□□□□□ -1.22
CHMP3-206ENST00000466032 GPATCH3Q96I76 525 aa7.4□□□□□ -1.22
CHMP3-206ENST00000466032 KRTAP4-7Q9BYR0 210 aa7.4□□□□□ -1.22
CHMP3-206ENST00000466032 C1orf115Q9H7X2 142 aa7.4□□□□□ -1.22
CHMP3-206ENST00000466032 GPR108Q9NPR9 543 aa7.4□□□□□ -1.22
CHMP3-206ENST00000466032 AKAP2Q9Y2D5 859 aa7.4□□□□□ -1.22
CHMP3-206ENST00000466032 UBN2Q6ZU65 1347 aa7.4□□□□□ -1.22
CHMP3-206ENST00000466032 PNMA6EA0A0J9YXQ4 647 aa7.39□□□□□ -1.23
CHMP3-206ENST00000466032 IGHMBP2P38935 993 aaKnown RBP7.39□□□□□ -1.23
CHMP3-206ENST00000466032 NPAS3Q8IXF0 933 aa7.39□□□□□ -1.23
CHMP3-206ENST00000466032 CNBD1Q8NA66 436 aa7.39□□□□□ -1.23
CHMP3-206ENST00000466032 TTLL11Q8NHH1 800 aa7.39□□□□□ -1.23
CHMP3-206ENST00000466032 KAZALD1Q96I82 304 aa7.39□□□□□ -1.23
CHMP3-206ENST00000466032 PARP3Q9Y6F1 533 aa7.39□□□□□ -1.23
CHMP3-206ENST00000466032 EP400Q96L91 3159 aa7.38□□□□□ -1.23
CHMP3-206ENST00000466032 AOX1Q06278 1338 aa7.38□□□□□ -1.23
CHMP3-206ENST00000466032 MROH5Q6ZUA9 1318 aa7.38□□□□□ -1.23
CHMP3-206ENST00000466032 PNPLA7Q6ZV29 1317 aa7.38□□□□□ -1.23
CHMP3-206ENST00000466032 EYA2O00167 538 aa7.38□□□□□ -1.23
CHMP3-206ENST00000466032 ERC2O15083 957 aa7.38□□□□□ -1.23
CHMP3-206ENST00000466032 SERPINB2P05120 415 aa7.38□□□□□ -1.23
CHMP3-206ENST00000466032 PDE6BP35913 854 aa7.38□□□□□ -1.23
CHMP3-206ENST00000466032 PTPN12Q05209 780 aaKnown RBP7.38□□□□□ -1.23
CHMP3-206ENST00000466032 NFIXQ14938 502 aa7.38□□□□□ -1.23
CHMP3-206ENST00000466032 ZNF827Q17R98 1081 aa7.38□□□□□ -1.23
CHMP3-206ENST00000466032 COL23A1Q86Y22 540 aaPredicted RBP7.38□□□□□ -1.23
CHMP3-206ENST00000466032 RHPN1Q8TCX5 695 aa7.38□□□□□ -1.23
CHMP3-206ENST00000466032 UPF1Q92900 1129 aaKnown RBP eCLIP7.38□□□□□ -1.23
CHMP3-206ENST00000466032 MPHOSPH8Q99549 860 aa7.38□□□□□ -1.23
CHMP3-206ENST00000466032 BRIP1Q9BX63 1249 aa7.38□□□□□ -1.23
CHMP3-206ENST00000466032 CEP126Q9P2H0 1117 aa7.38□□□□□ -1.23
CHMP3-206ENST00000466032 SRP68Q9UHB9 627 aaKnown RBP7.38□□□□□ -1.23
CHMP3-206ENST00000466032 CHMP3Q9Y3E7 222 aa7.38□□□□□ -1.23
CHMP3-206ENST00000466032 C4AP0C0L4 1744 aa7.38□□□□□ -1.23
CHMP3-206ENST00000466032 COL24A1Q17RW2 1714 aa7.38□□□□□ -1.23
CHMP3-206ENST00000466032 TTC41PQ6P2S7 1318 aa7.37□□□□□ -1.23
CHMP3-206ENST00000466032 KLRG2A4D1S0 409 aaPredicted RBP7.37□□□□□ -1.23
CHMP3-206ENST00000466032 IGSF3O75054 1194 aa7.37□□□□□ -1.23
CHMP3-206ENST00000466032 ITGA6P23229 1130 aa7.37□□□□□ -1.23
CHMP3-206ENST00000466032 ALDH1B1P30837 517 aa7.37□□□□□ -1.23
CHMP3-206ENST00000466032 RFX5P48382 616 aaPredicted RBP7.37□□□□□ -1.23
CHMP3-206ENST00000466032 GRIPAP1Q4V328 841 aa7.37□□□□□ -1.23
CHMP3-206ENST00000466032 LDHAL6AQ6ZMR3 332 aa7.37□□□□□ -1.23
CHMP3-206ENST00000466032 BICDL1Q6ZP65 573 aa7.37□□□□□ -1.23
CHMP3-206ENST00000466032 DDX46Q7L014 1031 aaKnown RBP7.37□□□□□ -1.23
CHMP3-206ENST00000466032 ANKRD18AQ8IVF6 992 aa7.37□□□□□ -1.23
CHMP3-206ENST00000466032 ANKLE1Q8NAG6 615 aa7.37□□□□□ -1.23
CHMP3-206ENST00000466032 TMX4Q9H1E5 349 aaPredicted RBP7.37□□□□□ -1.23
CHMP3-206ENST00000466032 OSBPL3Q9H4L5 887 aa7.37□□□□□ -1.23
CHMP3-206ENST00000466032 PKD2L1Q9P0L9 805 aa7.37□□□□□ -1.23
CHMP3-206ENST00000466032 MYH3P11055 1940 aa7.37□□□□□ -1.23
CHMP3-206ENST00000466032 LAMB2P55268 1798 aa7.36□□□□□ -1.23
CHMP3-206ENST00000466032 TRIM6-TRIM34B2RNG4 842 aa7.36□□□□□ -1.23
CHMP3-206ENST00000466032 POLRMTO00411 1230 aaKnown RBP7.36□□□□□ -1.23
CHMP3-206ENST00000466032 BBOX1O75936 387 aa7.36□□□□□ -1.23
CHMP3-206ENST00000466032 IFIT2P09913 472 aaKnown RBP7.36□□□□□ -1.23
CHMP3-206ENST00000466032 CRY2Q49AN0 593 aa7.36□□□□□ -1.23
CHMP3-206ENST00000466032 ERFEQ4G0M1 354 aa7.36□□□□□ -1.23
CHMP3-206ENST00000466032 EPHA10Q5JZY3 1008 aa7.36□□□□□ -1.23
CHMP3-206ENST00000466032 PRR5LQ6MZQ0 368 aa7.36□□□□□ -1.23
CHMP3-206ENST00000466032 DEFB132Q7Z7B7 95 aa7.36□□□□□ -1.23
CHMP3-206ENST00000466032 RBM17Q96I25 401 aaKnown RBP7.36□□□□□ -1.23
CHMP3-206ENST00000466032 CRAMP1Q96RY5 1269 aa7.36□□□□□ -1.23
CHMP3-206ENST00000466032 ANKRD2Q9GZV1 360 aa7.36□□□□□ -1.23
CHMP3-206ENST00000466032 SENP2Q9HC62 589 aa7.36□□□□□ -1.23
CHMP3-206ENST00000466032 CNNM1Q9NRU3 951 aa7.36□□□□□ -1.23
CHMP3-206ENST00000466032 BSDC1Q9NW68 430 aaPredicted RBP7.36□□□□□ -1.23
CHMP3-206ENST00000466032 NXF1Q9UBU9 619 aaKnown RBP7.36□□□□□ -1.23
CHMP3-206ENST00000466032 STAP2Q9UGK3 403 aa7.36□□□□□ -1.23
CHMP3-206ENST00000466032 EXOC6BQ9Y2D4 811 aa7.36□□□□□ -1.23
CHMP3-206ENST00000466032 ABCC12Q96J65 1359 aa7.35□□□□□ -1.23
CHMP3-206ENST00000466032 GLRX3O76003 335 aaKnown RBP7.35□□□□□ -1.23
CHMP3-206ENST00000466032 MMP10P09238 476 aa7.35□□□□□ -1.23
CHMP3-206ENST00000466032 HCLS1P14317 486 aaPredicted RBP7.35□□□□□ -1.23
CHMP3-206ENST00000466032 POLD1P28340 1107 aa7.35□□□□□ -1.23
CHMP3-206ENST00000466032 HOXA10P31260 410 aaPredicted RBP7.35□□□□□ -1.23
CHMP3-206ENST00000466032 RPS8P62241 208 aaKnown RBP7.35□□□□□ -1.23
CHMP3-206ENST00000466032 LRRFIP1Q32MZ4 808 aaKnown RBP7.35□□□□□ -1.23
CHMP3-206ENST00000466032 FAM161AQ3B820 660 aa7.35□□□□□ -1.23
CHMP3-206ENST00000466032 BMP2KLQ5H9B9 411 aa7.35□□□□□ -1.23
CHMP3-206ENST00000466032 RTL5Q5HYW3 569 aaPredicted RBP7.35□□□□□ -1.23
CHMP3-206ENST00000466032 NUTM1Q86Y26 1132 aa7.35□□□□□ -1.23
CHMP3-206ENST00000466032 RPGRQ92834 1020 aaKnown RBP7.35□□□□□ -1.23
CHMP3-206ENST00000466032 LNPKQ9C0E8 428 aa7.35□□□□□ -1.23
CHMP3-206ENST00000466032 MTFR1LQ9H019 292 aa7.35□□□□□ -1.23
CHMP3-206ENST00000466032 GREM2Q9H772 168 aa7.35□□□□□ -1.23
CHMP3-206ENST00000466032 ATP13A2Q9NQ11 1180 aa7.35□□□□□ -1.23
CHMP3-206ENST00000466032 TOR4AQ9NXH8 423 aa7.35□□□□□ -1.23
CHMP3-206ENST00000466032 FAM177BA6PVY3 158 aa7.34□□□□□ -1.23
CHMP3-206ENST00000466032 ADAM23O75077 832 aa7.34□□□□□ -1.23
CHMP3-206ENST00000466032 PDE8BO95263 885 aa7.34□□□□□ -1.23
CHMP3-206ENST00000466032 IFIT1P09914 478 aaKnown RBP7.34□□□□□ -1.23
CHMP3-206ENST00000466032 NPR1P16066 1061 aa7.34□□□□□ -1.23
CHMP3-206ENST00000466032 MX1P20591 662 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms