RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 ANKRD34AQ69YU3 496 aa8.27□□□□□ -1.09
ITGB1-208ENST00000464001 ARMC10Q8N2F6 343 aa8.27□□□□□ -1.09
ITGB1-208ENST00000464001 ASAP3Q8TDY4 903 aa8.27□□□□□ -1.09
ITGB1-208ENST00000464001 FAM46AQ96IP4 442 aaKnown RBP8.27□□□□□ -1.09
ITGB1-208ENST00000464001 RUSC1Q9BVN2 902 aa8.27□□□□□ -1.09
ITGB1-208ENST00000464001 BHLHE41Q9C0J9 482 aaPredicted RBP8.27□□□□□ -1.09
ITGB1-208ENST00000464001 RNF208Q9H0X6 261 aa8.27□□□□□ -1.09
ITGB1-208ENST00000464001 TUT1Q9H6E5 874 aaKnown RBP8.27□□□□□ -1.09
ITGB1-208ENST00000464001 SOX1O00570 391 aaPredicted RBP8.26□□□□□ -1.09
ITGB1-208ENST00000464001 SERPINB4P48594 390 aa8.26□□□□□ -1.09
ITGB1-208ENST00000464001 VN1R5Q7Z5H4 357 aa8.26□□□□□ -1.09
ITGB1-208ENST00000464001 NDUFB5O43674 189 aa8.25□□□□□ -1.09
ITGB1-208ENST00000464001 EIF4EBP3O60516 100 aaPredicted RBP8.25□□□□□ -1.09
ITGB1-208ENST00000464001 IGLV1-40P01703 118 aa8.25□□□□□ -1.09
ITGB1-208ENST00000464001 PEAR1Q5VY43 1037 aaPredicted RBP8.25□□□□□ -1.09
ITGB1-208ENST00000464001 MYRFLQ96LU7 910 aa8.25□□□□□ -1.09
ITGB1-208ENST00000464001 SOX17Q9H6I2 414 aaPredicted RBP8.25□□□□□ -1.09
ITGB1-208ENST00000464001 LATS2Q9NRM7 1088 aa8.25□□□□□ -1.09
ITGB1-208ENST00000464001 MEGF11A6BM72 1044 aa8.24□□□□□ -1.09
ITGB1-208ENST00000464001 POLR3DP05423 398 aaPredicted RBP8.24□□□□□ -1.09
ITGB1-208ENST00000464001 HGSNATQ68CP4 663 aa8.24□□□□□ -1.09
ITGB1-208ENST00000464001 FDX2Q6P4F2 183 aa8.24□□□□□ -1.09
ITGB1-208ENST00000464001 SUPT5HO00267 1087 aaKnown RBP8.23□□□□□ -1.09
ITGB1-208ENST00000464001 PDE3BQ13370 1112 aa8.23□□□□□ -1.09
ITGB1-208ENST00000464001 CLEC10AQ8IUN9 316 aa8.23□□□□□ -1.09
ITGB1-208ENST00000464001 GALNT12Q8IXK2 581 aa8.23□□□□□ -1.09
ITGB1-208ENST00000464001 ESRRAP11474 423 aaPredicted RBP8.22□□□□□ -1.09
ITGB1-208ENST00000464001 ECM1Q16610 540 aa8.22□□□□□ -1.09
ITGB1-208ENST00000464001 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.22□□□□□ -1.09
ITGB1-208ENST00000464001 FAM20CQ8IXL6 584 aa8.22□□□□□ -1.09
ITGB1-208ENST00000464001 CITED4Q96RK1 184 aa8.22□□□□□ -1.09
ITGB1-208ENST00000464001 USP26Q9BXU7 913 aa8.22□□□□□ -1.09
ITGB1-208ENST00000464001 C7orf69Q9H7B7 122 aa8.22□□□□□ -1.09
ITGB1-208ENST00000464001 HIF3AQ9Y2N7 669 aa8.22□□□□□ -1.09
ITGB1-208ENST00000464001 A0A1W2PP55 124 aa8.21□□□□□ -1.1
ITGB1-208ENST00000464001 GAS2O43903 313 aaKnown RBP8.21□□□□□ -1.1
ITGB1-208ENST00000464001 BMP3P12645 472 aa8.21□□□□□ -1.1
ITGB1-208ENST00000464001 PREPP48147 710 aa8.21□□□□□ -1.1
ITGB1-208ENST00000464001 ARHGAP4P98171 946 aa8.21□□□□□ -1.1
ITGB1-208ENST00000464001 NFIAQ12857 509 aa8.21□□□□□ -1.1
ITGB1-208ENST00000464001 NUTM2GQ5VZR2 741 aa8.21□□□□□ -1.1
ITGB1-208ENST00000464001 TXNDC2Q86VQ3 553 aa8.21□□□□□ -1.1
ITGB1-208ENST00000464001 TRIM42Q8IWZ5 723 aa8.21□□□□□ -1.1
ITGB1-208ENST00000464001 FAM83CQ9BQN1 747 aa8.21□□□□□ -1.1
ITGB1-208ENST00000464001 KCNF1Q9H3M0 494 aa8.21□□□□□ -1.1
ITGB1-208ENST00000464001 LIN7BQ9HAP6 207 aa8.21□□□□□ -1.1
ITGB1-208ENST00000464001 CYP4F12Q9HCS2 524 aa8.21□□□□□ -1.1
ITGB1-208ENST00000464001 PCMTD2Q9NV79 361 aa8.21□□□□□ -1.1
ITGB1-208ENST00000464001 HMX2A2RU54 273 aa8.2□□□□□ -1.1
ITGB1-208ENST00000464001 GSTM4Q03013 218 aa8.2□□□□□ -1.1
ITGB1-208ENST00000464001 RNF43Q68DV7 783 aa8.2□□□□□ -1.1
ITGB1-208ENST00000464001 CCNJLQ8IV13 435 aa8.2□□□□□ -1.1
ITGB1-208ENST00000464001 RETREG2Q8NC44 543 aa8.2□□□□□ -1.1
ITGB1-208ENST00000464001 CCER1Q8TC90 406 aaPredicted RBP8.2□□□□□ -1.1
ITGB1-208ENST00000464001 A0A096LPE4 126 aa8.19□□□□□ -1.1
ITGB1-208ENST00000464001 A0A1W2PPZ6 126 aa8.19□□□□□ -1.1
ITGB1-208ENST00000464001 METTL12A8MUP2 240 aa8.19□□□□□ -1.1
ITGB1-208ENST00000464001 SSTR4P31391 388 aa8.19□□□□□ -1.1
ITGB1-208ENST00000464001 BEND4Q6ZU67 534 aa8.19□□□□□ -1.1
ITGB1-208ENST00000464001 C12orf50Q8NA57 414 aaPredicted RBP8.19□□□□□ -1.1
ITGB1-208ENST00000464001 SMG8Q8ND04 991 aaKnown RBP8.19□□□□□ -1.1
ITGB1-208ENST00000464001 DBNDD2Q9BQY9 259 aa8.19□□□□□ -1.1
ITGB1-208ENST00000464001 TMPRSS13Q9BYE2 586 aa8.19□□□□□ -1.1
ITGB1-208ENST00000464001 CLEC4MQ9H2X3 399 aaPredicted RBP8.19□□□□□ -1.1
ITGB1-208ENST00000464001 LOC100289279A0A1B0GTE1 492 aa8.18□□□□□ -1.1
ITGB1-208ENST00000464001 COBLO75128 1261 aa8.18□□□□□ -1.1
ITGB1-208ENST00000464001 CPNE3O75131 537 aaKnown RBP8.18□□□□□ -1.1
ITGB1-208ENST00000464001 EXOSC6Q5RKV6 272 aaKnown RBP8.18□□□□□ -1.1
ITGB1-208ENST00000464001 KIAA0319Q5VV43 1072 aa8.18□□□□□ -1.1
ITGB1-208ENST00000464001 TMC1Q8TDI8 760 aa8.18□□□□□ -1.1
ITGB1-208ENST00000464001 FAM129BQ96TA1 746 aa8.18□□□□□ -1.1
ITGB1-208ENST00000464001 TCF12Q99081 682 aa8.18□□□□□ -1.1
ITGB1-208ENST00000464001 SUGCTQ9HAC7 445 aa8.18□□□□□ -1.1
ITGB1-208ENST00000464001 PCDH1Q08174 1060 aa8.17□□□□□ -1.1
ITGB1-208ENST00000464001 USPL1Q5W0Q7 1092 aa8.17□□□□□ -1.1
ITGB1-208ENST00000464001 ZDHHC13Q8IUH4 622 aa8.17□□□□□ -1.1
ITGB1-208ENST00000464001 TGFB1P01137 390 aa8.16□□□□□ -1.1
ITGB1-208ENST00000464001 GRIK1P39086 918 aa8.16□□□□□ -1.1
ITGB1-208ENST00000464001 GRIA4P48058 902 aa8.16□□□□□ -1.1
ITGB1-208ENST00000464001 CD97P48960 835 aa8.16□□□□□ -1.1
ITGB1-208ENST00000464001 SPRED3Q2MJR0 410 aa8.16□□□□□ -1.1
ITGB1-208ENST00000464001 DDX54Q8TDD1 881 aaKnown RBP8.16□□□□□ -1.1
ITGB1-208ENST00000464001 EHD4Q9H223 541 aa8.16□□□□□ -1.1
ITGB1-208ENST00000464001 ZFYVE1Q9HBF4 777 aa8.16□□□□□ -1.1
ITGB1-208ENST00000464001 TIAF1O95411 115 aa8.15□□□□□ -1.1
ITGB1-208ENST00000464001 CYP11A1P05108 521 aa8.15□□□□□ -1.1
ITGB1-208ENST00000464001 MAP4P27816 1152 aaKnown RBP8.15□□□□□ -1.1
ITGB1-208ENST00000464001 RXRBP28702 533 aa8.15□□□□□ -1.1
ITGB1-208ENST00000464001 ORC1Q13415 861 aa8.15□□□□□ -1.1
ITGB1-208ENST00000464001 HP1BP3Q5SSJ5 553 aaPredicted RBP8.15□□□□□ -1.1
ITGB1-208ENST00000464001 INTS5Q6P9B9 1019 aaKnown RBP8.15□□□□□ -1.1
ITGB1-208ENST00000464001 DNAJC25Q9H1X3 360 aa8.15□□□□□ -1.1
ITGB1-208ENST00000464001 DLGAP3O95886 979 aa8.14□□□□□ -1.11
ITGB1-208ENST00000464001 USP11P51784 963 aa8.14□□□□□ -1.11
ITGB1-208ENST00000464001 POU4F3Q15319 338 aa8.14□□□□□ -1.11
ITGB1-208ENST00000464001 ZNF423Q2M1K9 1284 aa8.14□□□□□ -1.11
ITGB1-208ENST00000464001 SGO2Q562F6 1265 aa8.14□□□□□ -1.11
ITGB1-208ENST00000464001 GIMAP7Q8NHV1 300 aa8.14□□□□□ -1.11
ITGB1-208ENST00000464001 DMRTB1Q96MA1 342 aa8.14□□□□□ -1.11
ITGB1-208ENST00000464001 NIF3L1Q9GZT8 377 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms