RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 NECAB2Q7Z6G3 386 aa17.77■□□□□ 0.44
C9orf3-211ENST00000463372 HELBQ8NG08 1087 aaPredicted RBP17.77■□□□□ 0.44
C9orf3-211ENST00000463372 PHACTR3Q96KR7 559 aa17.77■□□□□ 0.44
C9orf3-211ENST00000463372 SNX27Q96L92 541 aa17.77■□□□□ 0.44
C9orf3-211ENST00000463372 MYPNQ86TC9 1320 aa17.76■□□□□ 0.43
C9orf3-211ENST00000463372 SF3B3Q15393 1217 aaKnown RBP17.76■□□□□ 0.43
C9orf3-211ENST00000463372 CDX2Q99626 313 aaPredicted RBP17.76■□□□□ 0.43
C9orf3-211ENST00000463372 MXD3Q9BW11 206 aa17.76■□□□□ 0.43
C9orf3-211ENST00000463372 MIS18AQ9NYP9 233 aa17.76■□□□□ 0.43
C9orf3-211ENST00000463372 COL4A1P02462 1669 aa17.76■□□□□ 0.43
C9orf3-211ENST00000463372 USP2O75604 605 aaPredicted RBP17.75■□□□□ 0.43
C9orf3-211ENST00000463372 FMNL1O95466 1100 aaPredicted RBP17.75■□□□□ 0.43
C9orf3-211ENST00000463372 OSBPP22059 807 aa17.75■□□□□ 0.43
C9orf3-211ENST00000463372 FAM205AQ6ZU69 1335 aa17.74■□□□□ 0.43
C9orf3-211ENST00000463372 SYNGAP1Q96PV0 1343 aa17.74■□□□□ 0.43
C9orf3-211ENST00000463372 DACT2Q5SW24 774 aa17.74■□□□□ 0.43
C9orf3-211ENST00000463372 SLAIN1Q8ND83 568 aa17.74■□□□□ 0.43
C9orf3-211ENST00000463372 MGAMO43451 1857 aa17.73■□□□□ 0.43
C9orf3-211ENST00000463372 PRKAR2BP31323 418 aa17.73■□□□□ 0.43
C9orf3-211ENST00000463372 DCTN1Q14203 1278 aa17.73■□□□□ 0.43
C9orf3-211ENST00000463372 DEFB118Q96PH6 123 aa17.73■□□□□ 0.43
C9orf3-211ENST00000463372 THUMPD2Q9BTF0 503 aaKnown RBP17.72■□□□□ 0.43
C9orf3-211ENST00000463372 ZCCHC17Q9NP64 241 aaKnown RBP17.72■□□□□ 0.43
C9orf3-211ENST00000463372 CTGFP29279 349 aa17.71■□□□□ 0.43
C9orf3-211ENST00000463372 NBPF12Q5TAG4 269 aaPredicted RBP17.71■□□□□ 0.43
C9orf3-211ENST00000463372 STRIP1Q5VSL9 837 aa17.71■□□□□ 0.43
C9orf3-211ENST00000463372 ZNF428Q96B54 188 aa17.71■□□□□ 0.43
C9orf3-211ENST00000463372 ZBED3Q96IU2 234 aaPredicted RBP17.71■□□□□ 0.43
C9orf3-211ENST00000463372 BDP1A6H8Y1 2624 aa17.7■□□□□ 0.42
C9orf3-211ENST00000463372 KIAA0825Q8IV33 1275 aa17.7■□□□□ 0.42
C9orf3-211ENST00000463372 CNKSR2Q8WXI2 1034 aa17.7■□□□□ 0.42
C9orf3-211ENST00000463372 XDHP47989 1333 aa17.7■□□□□ 0.42
C9orf3-211ENST00000463372 CACNA1AO00555 2505 aa17.69■□□□□ 0.42
C9orf3-211ENST00000463372 DLGAP5Q15398 846 aa17.69■□□□□ 0.42
C9orf3-211ENST00000463372 PNISRQ8TF01 805 aaKnown RBP17.69■□□□□ 0.42
C9orf3-211ENST00000463372 DIS3LQ8TF46 1054 aaKnown RBP17.69■□□□□ 0.42
C9orf3-211ENST00000463372 ARIH1Q9Y4X5 557 aaPredicted RBP17.69■□□□□ 0.42
C9orf3-211ENST00000463372 ZNF804BA4D1E1 1349 aa17.69■□□□□ 0.42
C9orf3-211ENST00000463372 HTATSF1O43719 755 aaKnown RBP17.68■□□□□ 0.42
C9orf3-211ENST00000463372 MYO1BO43795 1136 aa17.68■□□□□ 0.42
C9orf3-211ENST00000463372 CETPP11597 493 aa17.68■□□□□ 0.42
C9orf3-211ENST00000463372 ATP2B4P23634 1241 aa17.68■□□□□ 0.42
C9orf3-211ENST00000463372 EIF4A1P60842 406 aaKnown RBP17.68■□□□□ 0.42
C9orf3-211ENST00000463372 C17orf99Q6UX52 265 aa17.68■□□□□ 0.42
C9orf3-211ENST00000463372 CPA4Q9UI42 421 aa17.68■□□□□ 0.42
C9orf3-211ENST00000463372 COL2A1P02458 1487 aaPredicted RBP17.68■□□□□ 0.42
C9orf3-211ENST00000463372 CDH23Q9H251 3354 aa17.67■□□□□ 0.42
C9orf3-211ENST00000463372 PRKCZQ05513 592 aa17.67■□□□□ 0.42
C9orf3-211ENST00000463372 MYLIPQ8WY64 445 aa17.67■□□□□ 0.42
C9orf3-211ENST00000463372 FAM89AQ96GI7 184 aa17.67■□□□□ 0.42
C9orf3-211ENST00000463372 CRISPLD2Q9H0B8 497 aa17.67■□□□□ 0.42
C9orf3-211ENST00000463372 HCN4Q9Y3Q4 1203 aa17.67■□□□□ 0.42
C9orf3-211ENST00000463372 ADGRA2Q96PE1 1338 aa17.67■□□□□ 0.42
C9orf3-211ENST00000463372 BTBD19C9JJ37 291 aa17.66■□□□□ 0.42
C9orf3-211ENST00000463372 INHAP05111 366 aa17.66■□□□□ 0.42
C9orf3-211ENST00000463372 FOSL2P15408 326 aa17.66■□□□□ 0.42
C9orf3-211ENST00000463372 AIMP1Q12904 312 aaKnown RBP17.66■□□□□ 0.42
C9orf3-211ENST00000463372 ANKLE1Q8NAG6 615 aa17.66■□□□□ 0.42
C9orf3-211ENST00000463372 VEZTQ9HBM0 779 aa17.66■□□□□ 0.42
C9orf3-211ENST00000463372 CSADQ9Y600 493 aa17.66■□□□□ 0.42
C9orf3-211ENST00000463372 COL3A1P02461 1466 aaPredicted RBP17.66■□□□□ 0.42
C9orf3-211ENST00000463372 ADCY3O60266 1144 aa17.65■□□□□ 0.42
C9orf3-211ENST00000463372 TTLL5Q6EMB2 1281 aa17.65■□□□□ 0.42
C9orf3-211ENST00000463372 LRP10Q7Z4F1 713 aa17.65■□□□□ 0.42
C9orf3-211ENST00000463372 NBPF3Q9H094 633 aa17.65■□□□□ 0.42
C9orf3-211ENST00000463372 RSPH6AQ9H0K4 717 aa17.65■□□□□ 0.42
C9orf3-211ENST00000463372 SEMA6BQ9H3T3 888 aa17.65■□□□□ 0.42
C9orf3-211ENST00000463372 PAK6Q9NQU5 681 aaPredicted RBP17.65■□□□□ 0.42
C9orf3-211ENST00000463372 DDX60LQ5H9U9 1706 aaKnown RBP17.64■□□□□ 0.41
C9orf3-211ENST00000463372 CLRN2A0PK11 232 aa17.64■□□□□ 0.41
C9orf3-211ENST00000463372 FCGRTP55899 365 aa17.64■□□□□ 0.41
C9orf3-211ENST00000463372 MDM2Q00987 491 aaPredicted RBP17.64■□□□□ 0.41
C9orf3-211ENST00000463372 VGLL4Q14135 290 aa17.64■□□□□ 0.41
C9orf3-211ENST00000463372 AMER1Q5JTC6 1135 aaPredicted RBP17.64■□□□□ 0.41
C9orf3-211ENST00000463372 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.64■□□□□ 0.41
C9orf3-211ENST00000463372 COPS6Q7L5N1 327 aa17.64■□□□□ 0.41
C9orf3-211ENST00000463372 SEC31BQ9NQW1 1179 aa17.64■□□□□ 0.41
C9orf3-211ENST00000463372 MED23Q9ULK4 1368 aa17.64■□□□□ 0.41
C9orf3-211ENST00000463372 ANXA1P04083 346 aa17.63■□□□□ 0.41
C9orf3-211ENST00000463372 EIF2S2P20042 333 aaKnown RBP17.63■□□□□ 0.41
C9orf3-211ENST00000463372 PDIA6Q15084 440 aa17.63■□□□□ 0.41
C9orf3-211ENST00000463372 RTL5Q5HYW3 569 aaPredicted RBP17.63■□□□□ 0.41
C9orf3-211ENST00000463372 C1QTNF1Q9BXJ1 281 aa17.63■□□□□ 0.41
C9orf3-211ENST00000463372 IRS4O14654 1257 aaPredicted RBP17.62■□□□□ 0.41
C9orf3-211ENST00000463372 ELNP15502 786 aa17.62■□□□□ 0.41
C9orf3-211ENST00000463372 MAP3K9P80192 1104 aa17.62■□□□□ 0.41
C9orf3-211ENST00000463372 SNAPC2Q13487 334 aa17.62■□□□□ 0.41
C9orf3-211ENST00000463372 RASA3Q14644 834 aa17.62■□□□□ 0.41
C9orf3-211ENST00000463372 COA1Q9GZY4 146 aa17.62■□□□□ 0.41
C9orf3-211ENST00000463372 C11orf49Q9H6J7 331 aa17.62■□□□□ 0.41
C9orf3-211ENST00000463372 MUC6Q6W4X9 2439 aa17.61■□□□□ 0.41
C9orf3-211ENST00000463372 PROSER3Q2NL68 480 aa17.61■□□□□ 0.41
C9orf3-211ENST00000463372 MTMR14Q8NCE2 650 aa17.61■□□□□ 0.41
C9orf3-211ENST00000463372 PXYLP1Q8TE99 480 aa17.61■□□□□ 0.41
C9orf3-211ENST00000463372 XAGE3Q8WTP9 111 aa17.61■□□□□ 0.41
C9orf3-211ENST00000463372 GABRQQ9UN88 632 aa17.61■□□□□ 0.41
C9orf3-211ENST00000463372 DOCK3Q8IZD9 2030 aa17.59■□□□□ 0.41
C9orf3-211ENST00000463372 DLG5Q8TDM6 1919 aa17.59■□□□□ 0.41
C9orf3-211ENST00000463372 SPDYE5A6NIY4 337 aa17.59■□□□□ 0.41
C9orf3-211ENST00000463372 GTF2IP78347 998 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms