RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 SLC10A5Q5PT55 438 aa8.11□□□□□ -1.11
MSH2-204ENST00000461394 PI16Q6UXB8 463 aa8.11□□□□□ -1.11
MSH2-204ENST00000461394 TICAM2Q86XR7 235 aa8.11□□□□□ -1.11
MSH2-204ENST00000461394 IL27Q8NEV9 243 aa8.11□□□□□ -1.11
MSH2-204ENST00000461394 RPGRQ92834 1020 aaKnown RBP8.11□□□□□ -1.11
MSH2-204ENST00000461394 TMX3Q96JJ7 454 aa8.11□□□□□ -1.11
MSH2-204ENST00000461394 GBP4Q96PP9 640 aa8.11□□□□□ -1.11
MSH2-204ENST00000461394 CWC22Q9HCG8 908 aaKnown RBP8.11□□□□□ -1.11
MSH2-204ENST00000461394 TFCP2L1Q9NZI6 479 aa8.11□□□□□ -1.11
MSH2-204ENST00000461394 MAST3O60307 1309 aa8.1□□□□□ -1.11
MSH2-204ENST00000461394 SNAP23O00161 211 aa8.1□□□□□ -1.11
MSH2-204ENST00000461394 APPP05067 770 aa8.1□□□□□ -1.11
MSH2-204ENST00000461394 PRR29P0C7W0 189 aa8.1□□□□□ -1.11
MSH2-204ENST00000461394 FGFR2P21802 821 aa8.1□□□□□ -1.11
MSH2-204ENST00000461394 ARID4AP29374 1257 aaPredicted RBP8.1□□□□□ -1.11
MSH2-204ENST00000461394 AK2P54819 239 aa8.1□□□□□ -1.11
MSH2-204ENST00000461394 RPS8P62241 208 aaKnown RBP8.1□□□□□ -1.11
MSH2-204ENST00000461394 NUCB2P80303 420 aa8.1□□□□□ -1.11
MSH2-204ENST00000461394 NECTIN1Q15223 517 aa8.1□□□□□ -1.11
MSH2-204ENST00000461394 ADCK5Q3MIX3 580 aa8.1□□□□□ -1.11
MSH2-204ENST00000461394 CAVIN4Q5BKX8 364 aa8.1□□□□□ -1.11
MSH2-204ENST00000461394 SLC9C2Q5TAH2 1124 aa8.1□□□□□ -1.11
MSH2-204ENST00000461394 RUFY3Q7L099 469 aa8.1□□□□□ -1.11
MSH2-204ENST00000461394 AMIGO3Q86WK7 504 aa8.1□□□□□ -1.11
MSH2-204ENST00000461394 SPATA5Q8NB90 893 aa8.1□□□□□ -1.11
MSH2-204ENST00000461394 APPBP2Q92624 585 aa8.1□□□□□ -1.11
MSH2-204ENST00000461394 CELF1Q92879 486 aaKnown RBP8.1□□□□□ -1.11
MSH2-204ENST00000461394 LARP6Q9BRS8 491 aaKnown RBP8.1□□□□□ -1.11
MSH2-204ENST00000461394 TM6SF1Q9BZW5 370 aa8.1□□□□□ -1.11
MSH2-204ENST00000461394 ANKRD2Q9GZV1 360 aa8.1□□□□□ -1.11
MSH2-204ENST00000461394 PIH1D3Q9NQM4 214 aaKnown RBP8.1□□□□□ -1.11
MSH2-204ENST00000461394 BSDC1Q9NW68 430 aaPredicted RBP8.1□□□□□ -1.11
MSH2-204ENST00000461394 DOCK2Q92608 1830 aa8.1□□□□□ -1.11
MSH2-204ENST00000461394 COL4A1P02462 1669 aa8.09□□□□□ -1.11
MSH2-204ENST00000461394 GOLGA6L22H0YM25 854 aa8.09□□□□□ -1.11
MSH2-204ENST00000461394 SERPINB2P05120 415 aa8.09□□□□□ -1.11
MSH2-204ENST00000461394 BCAMP50895 628 aa8.09□□□□□ -1.11
MSH2-204ENST00000461394 MAP3K12Q12852 859 aa8.09□□□□□ -1.11
MSH2-204ENST00000461394 UBE4AQ14139 1066 aa8.09□□□□□ -1.11
MSH2-204ENST00000461394 ANKRD1Q15327 319 aa8.09□□□□□ -1.11
MSH2-204ENST00000461394 VPS53Q5VIR6 699 aa8.09□□□□□ -1.11
MSH2-204ENST00000461394 ZGPATQ8N5A5 531 aaKnown RBP8.09□□□□□ -1.11
MSH2-204ENST00000461394 ZNF512BQ96KM6 892 aaPredicted RBP8.09□□□□□ -1.11
MSH2-204ENST00000461394 ZSCAN31Q96LW9 406 aaPredicted RBP8.09□□□□□ -1.11
MSH2-204ENST00000461394 NEK1Q96PY6 1258 aa8.09□□□□□ -1.11
MSH2-204ENST00000461394 DSCC1Q9BVC3 393 aa8.09□□□□□ -1.11
MSH2-204ENST00000461394 LRP2BPQ9P2M1 347 aa8.09□□□□□ -1.11
MSH2-204ENST00000461394 CTNNA3Q9UI47 895 aa8.09□□□□□ -1.11
MSH2-204ENST00000461394 MINPP1Q9UNW1 487 aa8.09□□□□□ -1.11
MSH2-204ENST00000461394 IQSEC3Q9UPP2 1182 aaPredicted RBP8.09□□□□□ -1.11
MSH2-204ENST00000461394 LIMCH1Q9UPQ0 1083 aa8.09□□□□□ -1.11
MSH2-204ENST00000461394 TNS1Q9HBL0 1735 aaKnown RBP8.09□□□□□ -1.11
MSH2-204ENST00000461394 ZNF532Q9HCE3 1301 aa8.08□□□□□ -1.12
MSH2-204ENST00000461394 CHD4Q14839 1912 aa8.08□□□□□ -1.12
MSH2-204ENST00000461394 DDX11L8A8MPP1 907 aa8.08□□□□□ -1.12
MSH2-204ENST00000461394 CYP2E1P05181 493 aaPredicted RBP8.08□□□□□ -1.12
MSH2-204ENST00000461394 HSPD1P10809 573 aaKnown RBP8.08□□□□□ -1.12
MSH2-204ENST00000461394 GYS1P13807 737 aa8.08□□□□□ -1.12
MSH2-204ENST00000461394 PDE6AP16499 860 aa8.08□□□□□ -1.12
MSH2-204ENST00000461394 RPS6KB1P23443 525 aa8.08□□□□□ -1.12
MSH2-204ENST00000461394 ADD2P35612 726 aa8.08□□□□□ -1.12
MSH2-204ENST00000461394 GYG1P46976 350 aa8.08□□□□□ -1.12
MSH2-204ENST00000461394 PDAP1Q13442 181 aaKnown RBP8.08□□□□□ -1.12
MSH2-204ENST00000461394 RASGRF1Q13972 1273 aa8.08□□□□□ -1.12
MSH2-204ENST00000461394 RAB3GAP1Q15042 981 aa8.08□□□□□ -1.12
MSH2-204ENST00000461394 IMMTQ16891 758 aaKnown RBP8.08□□□□□ -1.12
MSH2-204ENST00000461394 FOXD4L5Q5VV16 416 aaPredicted RBP8.08□□□□□ -1.12
MSH2-204ENST00000461394 PRR5LQ6MZQ0 368 aa8.08□□□□□ -1.12
MSH2-204ENST00000461394 CCDC83Q8IWF9 413 aa8.08□□□□□ -1.12
MSH2-204ENST00000461394 MAGEB6Q8N7X4 407 aa8.08□□□□□ -1.12
MSH2-204ENST00000461394 FOXD4L4Q8WXT5 416 aaPredicted RBP8.08□□□□□ -1.12
MSH2-204ENST00000461394 KCNB2Q92953 911 aa8.08□□□□□ -1.12
MSH2-204ENST00000461394 TNPO1Q92973 898 aaKnown RBP8.08□□□□□ -1.12
MSH2-204ENST00000461394 OSBP2Q969R2 916 aa8.08□□□□□ -1.12
MSH2-204ENST00000461394 AIDAQ96BJ3 306 aa8.08□□□□□ -1.12
MSH2-204ENST00000461394 IL17RAQ96F46 866 aa8.08□□□□□ -1.12
MSH2-204ENST00000461394 RBM17Q96I25 401 aaKnown RBP8.08□□□□□ -1.12
MSH2-204ENST00000461394 ZSWIM6Q9HCJ5 1215 aa8.08□□□□□ -1.12
MSH2-204ENST00000461394 RAI14Q9P0K7 980 aa8.08□□□□□ -1.12
MSH2-204ENST00000461394 ANKIB1Q9P2G1 1089 aa8.08□□□□□ -1.12
MSH2-204ENST00000461394 ABCF2Q9UG63 623 aa8.08□□□□□ -1.12
MSH2-204ENST00000461394 NAP1L2Q9ULW6 460 aaPredicted RBP8.08□□□□□ -1.12
MSH2-204ENST00000461394 SMC3Q9UQE7 1217 aa8.08□□□□□ -1.12
MSH2-204ENST00000461394 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.08□□□□□ -1.12
MSH2-204ENST00000461394 CCDC88AQ3V6T2 1871 aa8.08□□□□□ -1.12
MSH2-204ENST00000461394 CACNA1SQ13698 1873 aa8.07□□□□□ -1.12
MSH2-204ENST00000461394 GPAA1O43292 621 aa8.07□□□□□ -1.12
MSH2-204ENST00000461394 PTMSP20962 102 aa8.07□□□□□ -1.12
MSH2-204ENST00000461394 MCM4P33991 863 aa8.07□□□□□ -1.12
MSH2-204ENST00000461394 CHAF1AQ13111 956 aaPredicted RBP8.07□□□□□ -1.12
MSH2-204ENST00000461394 GRAPQ13588 217 aa8.07□□□□□ -1.12
MSH2-204ENST00000461394 CUL4AQ13619 759 aa8.07□□□□□ -1.12
MSH2-204ENST00000461394 GRAPLQ8TC17 118 aaPredicted RBP8.07□□□□□ -1.12
MSH2-204ENST00000461394 TCEANC2Q96MN5 208 aa8.07□□□□□ -1.12
MSH2-204ENST00000461394 TTC14Q96N46 770 aa8.07□□□□□ -1.12
MSH2-204ENST00000461394 PUS7LQ9H0K6 701 aaKnown RBP8.07□□□□□ -1.12
MSH2-204ENST00000461394 SH2B1Q9NRF2 756 aaPredicted RBP8.07□□□□□ -1.12
MSH2-204ENST00000461394 WWC3Q9ULE0 1092 aa8.07□□□□□ -1.12
MSH2-204ENST00000461394 DENND2AQ9ULE3 1009 aa8.07□□□□□ -1.12
MSH2-204ENST00000461394 RPAP1Q9BWH6 1393 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms