RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 TRAF1Q13077 416 aa18.11■□□□□ 0.49
HDAC7-217ENST00000459625 BRDTQ58F21 947 aaPredicted RBP18.11■□□□□ 0.49
HDAC7-217ENST00000459625 EYA3Q99504 573 aa18.11■□□□□ 0.49
HDAC7-217ENST00000459625 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.11■□□□□ 0.494e-7■■■□□ 19.1
HDAC7-217ENST00000459625 ACEP12821 1306 aa18.11■□□□□ 0.49
HDAC7-217ENST00000459625 HS2ST1Q7LGA3 356 aa18.11■□□□□ 0.49
HDAC7-217ENST00000459625 PSMD6Q15008 389 aa18.11■□□□□ 0.49
HDAC7-217ENST00000459625 SLC8A3P57103 927 aa18.11■□□□□ 0.49
HDAC7-217ENST00000459625 UBXN1Q04323 297 aa18.11■□□□□ 0.49
HDAC7-217ENST00000459625 USH1GQ495M9 461 aa18.11■□□□□ 0.49
HDAC7-217ENST00000459625 C4orf50Q6ZRC1 276 aa18.11■□□□□ 0.49
HDAC7-217ENST00000459625 CCDC77Q9BR77 488 aa18.11■□□□□ 0.49
HDAC7-217ENST00000459625 IRS4O14654 1257 aaPredicted RBP18.11■□□□□ 0.49
HDAC7-217ENST00000459625 KRT2P35908 639 aa18.11■□□□□ 0.49
HDAC7-217ENST00000459625 MSL1Q68DK7 614 aa18.11■□□□□ 0.49
HDAC7-217ENST00000459625 TRPC3Q13507 836 aa18.1■□□□□ 0.49
HDAC7-217ENST00000459625 SPDYE16A6NNV3 312 aaPredicted RBP18.1■□□□□ 0.49
HDAC7-217ENST00000459625 PSMA7O14818 248 aa18.1■□□□□ 0.49
HDAC7-217ENST00000459625 PDIA4P13667 645 aaKnown RBP18.1■□□□□ 0.49
HDAC7-217ENST00000459625 ERCC3P19447 782 aa18.1■□□□□ 0.49
HDAC7-217ENST00000459625 RARSP54136 660 aaKnown RBP18.1■□□□□ 0.49
HDAC7-217ENST00000459625 FAM160A1Q05DH4 1040 aa18.1■□□□□ 0.49
HDAC7-217ENST00000459625 SPDYE2Q495Y8 402 aa18.1■□□□□ 0.49
HDAC7-217ENST00000459625 WDR44Q5JSH3 913 aa18.1■□□□□ 0.49
HDAC7-217ENST00000459625 DDX12PQ92771 950 aa18.1■□□□□ 0.49
HDAC7-217ENST00000459625 LRRC9Q6ZRR7 1453 aa18.1■□□□□ 0.49
HDAC7-217ENST00000459625 NEK11Q8NG66 645 aa18.1■□□□□ 0.49
HDAC7-217ENST00000459625 GSDMBQ8TAX9 411 aa18.1■□□□□ 0.49
HDAC7-217ENST00000459625 LEO1Q8WVC0 666 aaPredicted RBP18.1■□□□□ 0.49
HDAC7-217ENST00000459625 CNNM2Q9H8M5 875 aa18.1■□□□□ 0.49
HDAC7-217ENST00000459625 RNASE9P60153 205 aaKnown RBP18.09■□□□□ 0.49
HDAC7-217ENST00000459625 SEC62Q99442 399 aaKnown RBP18.09■□□□□ 0.49
HDAC7-217ENST00000459625 MBIPQ9NS73 344 aa18.09■□□□□ 0.49
HDAC7-217ENST00000459625 KIAA1107Q9UPP5 1409 aa18.09■□□□□ 0.49
HDAC7-217ENST00000459625 GSDMDP57764 484 aa18.09■□□□□ 0.49
HDAC7-217ENST00000459625 FAM204AQ9H8W3 233 aa18.09■□□□□ 0.49
HDAC7-217ENST00000459625 HFM1A2PYH4 1435 aa18.09■□□□□ 0.49
HDAC7-217ENST00000459625 HSPA1LP34931 641 aa18.09■□□□□ 0.49
HDAC7-217ENST00000459625 KARSQ15046 597 aaKnown RBP18.09■□□□□ 0.49
HDAC7-217ENST00000459625 LETM2Q2VYF4 491 aa18.09■□□□□ 0.49
HDAC7-217ENST00000459625 CNPY2Q9Y2B0 182 aa18.09■□□□□ 0.49
HDAC7-217ENST00000459625 TCIRG1Q13488 830 aa18.09■□□□□ 0.49
HDAC7-217ENST00000459625 LARGE2Q8N3Y3 721 aa18.09■□□□□ 0.49
HDAC7-217ENST00000459625 STX10O60499 249 aa18.08■□□□□ 0.49
HDAC7-217ENST00000459625 GNAQP50148 359 aa18.08■□□□□ 0.49
HDAC7-217ENST00000459625 AOPEPQ8N6M6 819 aa18.08■□□□□ 0.49
HDAC7-217ENST00000459625 PAGR1Q9BTK6 254 aa18.08■□□□□ 0.49
HDAC7-217ENST00000459625 TRIM7Q9C029 511 aa18.08■□□□□ 0.49
HDAC7-217ENST00000459625 M0QZ92 97 aa18.08■□□□□ 0.49
HDAC7-217ENST00000459625 PARP1P09874 1014 aaKnown RBP18.08■□□□□ 0.49
HDAC7-217ENST00000459625 KCNA4P22459 653 aa18.08■□□□□ 0.49
HDAC7-217ENST00000459625 NAA25Q14CX7 972 aa18.08■□□□□ 0.49
HDAC7-217ENST00000459625 PPP4R3BQ5MIZ7 849 aa18.08■□□□□ 0.49
HDAC7-217ENST00000459625 NFATC2IPQ8NCF5 419 aa18.08■□□□□ 0.49
HDAC7-217ENST00000459625 NSRP1Q9H0G5 558 aaKnown RBP18.08■□□□□ 0.49
HDAC7-217ENST00000459625 MCM6Q14566 821 aa18.08■□□□□ 0.48
HDAC7-217ENST00000459625 TBC1D9Q6ZT07 1266 aa18.08■□□□□ 0.48
HDAC7-217ENST00000459625 KIAA1524Q8TCG1 905 aa18.08■□□□□ 0.48
HDAC7-217ENST00000459625 PIK3R4Q99570 1358 aa18.08■□□□□ 0.48
HDAC7-217ENST00000459625 ANO6Q4KMQ2 910 aa18.08■□□□□ 0.48
HDAC7-217ENST00000459625 SMCR8Q8TEV9 937 aaPredicted RBP18.08■□□□□ 0.48
HDAC7-217ENST00000459625 POTEB2H3BUK9 544 aa18.07■□□□□ 0.48
HDAC7-217ENST00000459625 ALDH1L2Q3SY69 923 aa18.07■□□□□ 0.48
HDAC7-217ENST00000459625 TEX11Q8IYF3 940 aa18.07■□□□□ 0.48
HDAC7-217ENST00000459625 TNPO1Q92973 898 aaKnown RBP18.07■□□□□ 0.48
HDAC7-217ENST00000459625 GUCA1BQ9UMX6 200 aa18.07■□□□□ 0.48
HDAC7-217ENST00000459625 USTQ9Y2C2 406 aa18.07■□□□□ 0.48
HDAC7-217ENST00000459625 HGSO14964 777 aaPredicted RBP18.07■□□□□ 0.48
HDAC7-217ENST00000459625 STRN3Q13033 797 aa18.07■□□□□ 0.48
HDAC7-217ENST00000459625 FRMD4BQ9Y2L6 1034 aa18.07■□□□□ 0.48
HDAC7-217ENST00000459625 INF2Q27J81 1249 aa18.07■□□□□ 0.48
HDAC7-217ENST00000459625 DYNC1I1O14576 645 aa18.07■□□□□ 0.48
HDAC7-217ENST00000459625 ZSCAN30Q86W11 494 aa18.07■□□□□ 0.48
HDAC7-217ENST00000459625 PTPRCP08575 1304 aa18.06■□□□□ 0.48
HDAC7-217ENST00000459625 ATP2A2P16615 1042 aaKnown RBP18.06■□□□□ 0.48
HDAC7-217ENST00000459625 SEPT14Q6ZU15 432 aa18.06■□□□□ 0.48
HDAC7-217ENST00000459625 PAG1Q9NWQ8 432 aa18.06■□□□□ 0.48
HDAC7-217ENST00000459625 HSPA4P34932 840 aa18.06■□□□□ 0.48
HDAC7-217ENST00000459625 DIXDC1Q155Q3 683 aa18.06■□□□□ 0.48
HDAC7-217ENST00000459625 ZNF174Q15697 407 aa18.06■□□□□ 0.48
HDAC7-217ENST00000459625 NOL3O60936 208 aaKnown RBP18.06■□□□□ 0.48
HDAC7-217ENST00000459625 APOBRQ0VD83 1088 aa18.06■□□□□ 0.48
HDAC7-217ENST00000459625 MCMDC2Q4G0Z9 681 aa18.06■□□□□ 0.48
HDAC7-217ENST00000459625 MKRN1Q9UHC7 482 aaKnown RBP18.06■□□□□ 0.48
HDAC7-217ENST00000459625 PPME1Q9Y570 386 aa18.06■□□□□ 0.48
HDAC7-217ENST00000459625 CAMSAP2Q08AD1 1489 aa18.06■□□□□ 0.48
HDAC7-217ENST00000459625 TACC1O75410 805 aa18.06■□□□□ 0.48
HDAC7-217ENST00000459625 PRPHP41219 470 aa18.06■□□□□ 0.48
HDAC7-217ENST00000459625 TSTA3Q13630 321 aaPredicted RBP18.06■□□□□ 0.48
HDAC7-217ENST00000459625 EHBP1Q8NDI1 1231 aa18.06■□□□□ 0.48
HDAC7-217ENST00000459625 RBM8AQ9Y5S9 174 aaKnown RBP18.06■□□□□ 0.48
HDAC7-217ENST00000459625 CNBD1Q8NA66 436 aa18.06■□□□□ 0.48
HDAC7-217ENST00000459625 LMTK3Q96Q04 1460 aa18.06■□□□□ 0.48
HDAC7-217ENST00000459625 TRIM27P14373 513 aa18.05■□□□□ 0.48
HDAC7-217ENST00000459625 RHPN1Q8TCX5 695 aa18.05■□□□□ 0.48
HDAC7-217ENST00000459625 DNAI1Q9UI46 699 aa18.05■□□□□ 0.48
HDAC7-217ENST00000459625 BCS1LQ9Y276 419 aa18.05■□□□□ 0.48
HDAC7-217ENST00000459625 TMTC2Q8N394 836 aa18.05■□□□□ 0.48
HDAC7-217ENST00000459625 UBLCP1Q8WVY7 318 aaPredicted RBP18.05■□□□□ 0.48
HDAC7-217ENST00000459625 TBC1D31Q96DN5 1066 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms