RNA–Protein interactions for RNA: ENST00000455586.6

VSIG4-204, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSIG4, Length 2,190 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-204ENST00000455586 CASZ1Q86V15 1759 aa11.08□□□□□ -0.64
VSIG4-204ENST00000455586 BRD1O95696 1058 aa11.08□□□□□ -0.64
VSIG4-204ENST00000455586 ZFYP08048 801 aaPredicted RBP11.08□□□□□ -0.64
VSIG4-204ENST00000455586 ANKRD1Q15327 319 aa11.08□□□□□ -0.64
VSIG4-204ENST00000455586 DSCC1Q9BVC3 393 aa11.08□□□□□ -0.64
VSIG4-204ENST00000455586 PDGFDQ9GZP0 370 aaPredicted RBP11.08□□□□□ -0.64
VSIG4-204ENST00000455586 WWC3Q9ULE0 1092 aa11.08□□□□□ -0.64
VSIG4-204ENST00000455586 COL24A1Q17RW2 1714 aa11.08□□□□□ -0.64
VSIG4-204ENST00000455586 MAST3O60307 1309 aa11.08□□□□□ -0.64
VSIG4-204ENST00000455586 MYH7P12883 1935 aa11.08□□□□□ -0.64
VSIG4-204ENST00000455586 RPS6KB1P23443 525 aa11.07□□□□□ -0.64
VSIG4-204ENST00000455586 TXNRD3Q86VQ6 643 aa11.07□□□□□ -0.64
VSIG4-204ENST00000455586 SPATA5Q8NB90 893 aa11.07□□□□□ -0.64
VSIG4-204ENST00000455586 ALDH8A1Q9H2A2 487 aaPredicted RBP11.07□□□□□ -0.64
VSIG4-204ENST00000455586 PNPLA7Q6ZV29 1317 aa11.07□□□□□ -0.64
VSIG4-204ENST00000455586 ARID4AP29374 1257 aaPredicted RBP11.07□□□□□ -0.64
VSIG4-204ENST00000455586 SLC9C2Q5TAH2 1124 aa11.07□□□□□ -0.64
VSIG4-204ENST00000455586 WDR33Q9C0J8 1336 aaKnown RBP11.07□□□□□ -0.64
VSIG4-204ENST00000455586 MCTP1Q6DN14 999 aa11.06□□□□□ -0.64
VSIG4-204ENST00000455586 TTLL5Q6EMB2 1281 aa11.06□□□□□ -0.64
VSIG4-204ENST00000455586 AKAP11Q9UKA4 1901 aa11.06□□□□□ -0.64
VSIG4-204ENST00000455586 MYO5AQ9Y4I1 1855 aaKnown RBP11.06□□□□□ -0.64
VSIG4-204ENST00000455586 ST5P78524 1137 aa11.06□□□□□ -0.64
VSIG4-204ENST00000455586 OLFM4Q6UX06 510 aa11.06□□□□□ -0.64
VSIG4-204ENST00000455586 FAM84BQ96KN1 310 aaPredicted RBP11.06□□□□□ -0.64
VSIG4-204ENST00000455586 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.06□□□□□ -0.64
VSIG4-204ENST00000455586 GZF1Q9H116 711 aaPredicted RBP11.06□□□□□ -0.64
VSIG4-204ENST00000455586 SMC3Q9UQE7 1217 aa11.06□□□□□ -0.64
VSIG4-204ENST00000455586 FOXP2O15409 715 aa11.05□□□□□ -0.64
VSIG4-204ENST00000455586 LARGE1O95461 756 aa11.05□□□□□ -0.64
VSIG4-204ENST00000455586 CYP21A2P08686 494 aa11.05□□□□□ -0.64
VSIG4-204ENST00000455586 MMP10P09238 476 aa11.05□□□□□ -0.64
VSIG4-204ENST00000455586 HMGB1P09429 215 aaKnown RBP11.05□□□□□ -0.64
VSIG4-204ENST00000455586 UQCRFS1P1P0C7P4 283 aa11.05□□□□□ -0.64
VSIG4-204ENST00000455586 HSPD1P10809 573 aaKnown RBP11.05□□□□□ -0.64
VSIG4-204ENST00000455586 TTF1Q15361 905 aaPredicted RBP11.05□□□□□ -0.64
VSIG4-204ENST00000455586 KLHL40Q2TBA0 621 aa11.05□□□□□ -0.64
VSIG4-204ENST00000455586 RPGRQ92834 1020 aaKnown RBP11.05□□□□□ -0.64
VSIG4-204ENST00000455586 NEK1Q96PY6 1258 aa11.05□□□□□ -0.64
VSIG4-204ENST00000455586 CAMKK2Q96RR4 588 aa11.05□□□□□ -0.64
VSIG4-204ENST00000455586 ZNF532Q9HCE3 1301 aa11.04□□□□□ -0.64
VSIG4-204ENST00000455586 GRAPQ13588 217 aa11.04□□□□□ -0.64
VSIG4-204ENST00000455586 ZSCAN25Q6NSZ9 544 aa11.04□□□□□ -0.64
VSIG4-204ENST00000455586 CCDC83Q8IWF9 413 aa11.04□□□□□ -0.64
VSIG4-204ENST00000455586 GRAPLQ8TC17 118 aaPredicted RBP11.04□□□□□ -0.64
VSIG4-204ENST00000455586 APPBP2Q92624 585 aa11.04□□□□□ -0.64
VSIG4-204ENST00000455586 ANKIB1Q9P2G1 1089 aa11.04□□□□□ -0.64
VSIG4-204ENST00000455586 ABCF2Q9UG63 623 aa11.04□□□□□ -0.64
VSIG4-204ENST00000455586 ADD2P35612 726 aa11.04□□□□□ -0.64
VSIG4-204ENST00000455586 HAND2P61296 217 aa11.04□□□□□ -0.64
VSIG4-204ENST00000455586 ME3Q16798 604 aa11.04□□□□□ -0.64
VSIG4-204ENST00000455586 L1TD1Q5T7N2 865 aaKnown RBP11.04□□□□□ -0.64
VSIG4-204ENST00000455586 VPS37DQ86XT2 251 aa11.04□□□□□ -0.64
VSIG4-204ENST00000455586 MAGEB6Q8N7X4 407 aa11.04□□□□□ -0.64
VSIG4-204ENST00000455586 TPCN1Q9ULQ1 816 aa11.04□□□□□ -0.64
VSIG4-204ENST00000455586 ISY1Q9ULR0 285 aaKnown RBP11.04□□□□□ -0.64
VSIG4-204ENST00000455586 DDX49Q9Y6V7 483 aaKnown RBP11.04□□□□□ -0.64
VSIG4-204ENST00000455586 COL1A1P02452 1464 aaPredicted RBP11.04□□□□□ -0.64
VSIG4-204ENST00000455586 TNS1Q9HBL0 1735 aaKnown RBP11.04□□□□□ -0.64
VSIG4-204ENST00000455586 LAMA4Q16363 1823 aa11.03□□□□□ -0.64
VSIG4-204ENST00000455586 PDE6AP16499 860 aa11.03□□□□□ -0.64
VSIG4-204ENST00000455586 UBE4AQ14139 1066 aa11.03□□□□□ -0.64
VSIG4-204ENST00000455586 STOX1Q6ZVD7 989 aa11.03□□□□□ -0.64
VSIG4-204ENST00000455586 LMBRD1Q9NUN5 540 aa11.03□□□□□ -0.64
VSIG4-204ENST00000455586 ZNF804BA4D1E1 1349 aa11.03□□□□□ -0.64
VSIG4-204ENST00000455586 GOLGA6L3A6NEY3 463 aa11.03□□□□□ -0.64
VSIG4-204ENST00000455586 GPAA1O43292 621 aa11.03□□□□□ -0.64
VSIG4-204ENST00000455586 PDIA4P13667 645 aaKnown RBP11.03□□□□□ -0.64
VSIG4-204ENST00000455586 GPSM2P81274 684 aa11.03□□□□□ -0.64
VSIG4-204ENST00000455586 TOB2Q14106 344 aaPredicted RBP11.03□□□□□ -0.64
VSIG4-204ENST00000455586 SLC15A2Q16348 729 aa11.03□□□□□ -0.64
VSIG4-204ENST00000455586 CRY2Q49AN0 593 aa11.03□□□□□ -0.64
VSIG4-204ENST00000455586 FOXD4L5Q5VV16 416 aaPredicted RBP11.03□□□□□ -0.64
VSIG4-204ENST00000455586 NLGN1Q8N2Q7 840 aa11.03□□□□□ -0.64
VSIG4-204ENST00000455586 MIGA1Q8NAN2 632 aa11.03□□□□□ -0.64
VSIG4-204ENST00000455586 FOXD4L4Q8WXT5 416 aaPredicted RBP11.03□□□□□ -0.64
VSIG4-204ENST00000455586 LRRC2Q9BYS8 371 aa11.03□□□□□ -0.64
VSIG4-204ENST00000455586 NSFL1CQ9UNZ2 370 aaKnown RBP11.03□□□□□ -0.64
VSIG4-204ENST00000455586 DOCK2Q92608 1830 aa11.02□□□□□ -0.65
VSIG4-204ENST00000455586 TCRBV5S4A2TA0A5A2 114 aa11.02□□□□□ -0.65
VSIG4-204ENST00000455586 STX6O43752 255 aa11.02□□□□□ -0.65
VSIG4-204ENST00000455586 CHAF1AQ13111 956 aaPredicted RBP11.02□□□□□ -0.65
VSIG4-204ENST00000455586 CAVIN4Q5BKX8 364 aa11.02□□□□□ -0.65
VSIG4-204ENST00000455586 ADGRA1Q86SQ6 560 aa11.02□□□□□ -0.65
VSIG4-204ENST00000455586 LRP2BPQ9P2M1 347 aa11.02□□□□□ -0.65
VSIG4-204ENST00000455586 CTNNA3Q9UI47 895 aa11.02□□□□□ -0.65
VSIG4-204ENST00000455586 A0A1B0GUL6 1792 aa11.02□□□□□ -0.65
VSIG4-204ENST00000455586 FSD2A1L4K1 749 aa11.01□□□□□ -0.65
VSIG4-204ENST00000455586 ZSCAN22P10073 491 aaPredicted RBP11.01□□□□□ -0.65
VSIG4-204ENST00000455586 SYT1P21579 422 aa11.01□□□□□ -0.65
VSIG4-204ENST00000455586 GJB2P29033 226 aa11.01□□□□□ -0.65
VSIG4-204ENST00000455586 ST3GAL1Q11201 340 aa11.01□□□□□ -0.65
VSIG4-204ENST00000455586 CHST3Q7LGC8 479 aa11.01□□□□□ -0.65
VSIG4-204ENST00000455586 PRKAB2O43741 272 aa11.01□□□□□ -0.65
VSIG4-204ENST00000455586 FGAP02671 866 aa11.01□□□□□ -0.65
VSIG4-204ENST00000455586 NECAB1Q8N987 351 aa11.01□□□□□ -0.65
VSIG4-204ENST00000455586 ARMT1Q9H993 441 aa11.01□□□□□ -0.65
VSIG4-204ENST00000455586 DENND2AQ9ULE3 1009 aa11.01□□□□□ -0.65
VSIG4-204ENST00000455586 ATP6V1DQ9Y5K8 247 aa11.01□□□□□ -0.65
VSIG4-204ENST00000455586 PRPF40AO75400 957 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms