RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	NAP1L2	Q9ULW6	460 aa	Predicted RBP	19.86	■□□□□ 0.77
TOM1-210	ENST00000449058	NUP98	P52948	1817 aa		19.86	■□□□□ 0.77
TOM1-210	ENST00000449058	PI16	Q6UXB8	463 aa		19.85	■□□□□ 0.77
TOM1-210	ENST00000449058	KIAA1524	Q8TCG1	905 aa		19.85	■□□□□ 0.77
TOM1-210	ENST00000449058	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	19.85	■□□□□ 0.77
TOM1-210	ENST00000449058	DISP2	A7MBM2	1401 aa		19.85	■□□□□ 0.77
TOM1-210	ENST00000449058	WDR19	Q8NEZ3	1342 aa		19.85	■□□□□ 0.77
TOM1-210	ENST00000449058	ITGA6	P23229	1130 aa		19.85	■□□□□ 0.77
TOM1-210	ENST00000449058	HAND2	P61296	217 aa		19.85	■□□□□ 0.77
TOM1-210	ENST00000449058	HSP90AB3P	Q58FF7	597 aa		19.85	■□□□□ 0.77
TOM1-210	ENST00000449058	METTL24	Q5JXM2	366 aa		19.85	■□□□□ 0.77
TOM1-210	ENST00000449058	CCAR1	Q8IX12	1150 aa	Known RBP	19.85	■□□□□ 0.77
TOM1-210	ENST00000449058	C17orf53	Q8N3J3	647 aa	Predicted RBP	19.85	■□□□□ 0.77
TOM1-210	ENST00000449058	GREM2	Q9H772	168 aa		19.85	■□□□□ 0.77
TOM1-210	ENST00000449058	BCL9	O00512	1426 aa		19.84	■□□□□ 0.77
TOM1-210	ENST00000449058	ATRN	O75882	1429 aa		19.84	■□□□□ 0.77
TOM1-210	ENST00000449058	CTAGE5	O15320	804 aa		19.84	■□□□□ 0.77
TOM1-210	ENST00000449058	PRC1	O43663	620 aa		19.84	■□□□□ 0.77
TOM1-210	ENST00000449058	MCAM	P43121	646 aa		19.84	■□□□□ 0.77
TOM1-210	ENST00000449058	ZNF165	P49910	485 aa		19.84	■□□□□ 0.77
TOM1-210	ENST00000449058	CTSW	P56202	376 aa		19.84	■□□□□ 0.77
TOM1-210	ENST00000449058	LDHAL6A	Q6ZMR3	332 aa		19.84	■□□□□ 0.77
TOM1-210	ENST00000449058	VGLL2	Q8N8G2	317 aa		19.84	■□□□□ 0.77
TOM1-210	ENST00000449058	SPC24	Q8NBT2	197 aa		19.84	■□□□□ 0.77
TOM1-210	ENST00000449058	GOLPH3L	Q9H4A5	285 aa		19.84	■□□□□ 0.77
TOM1-210	ENST00000449058	DYNC1I1	O14576	645 aa		19.84	■□□□□ 0.77
TOM1-210	ENST00000449058	GPAA1	O43292	621 aa		19.84	■□□□□ 0.77
TOM1-210	ENST00000449058	CYP19A1	P11511	503 aa	Predicted RBP	19.84	■□□□□ 0.77
TOM1-210	ENST00000449058	SNW1	Q13573	536 aa	Known RBP	19.84	■□□□□ 0.77
TOM1-210	ENST00000449058	DNAJC25	Q9H1X3	360 aa		19.84	■□□□□ 0.77
TOM1-210	ENST00000449058	MYO5A	Q9Y4I1	1855 aa	Known RBP	19.83	■□□□□ 0.77
TOM1-210	ENST00000449058	GPT	P24298	496 aa		19.83	■□□□□ 0.77
TOM1-210	ENST00000449058	ANTXR2	P58335	489 aa		19.83	■□□□□ 0.77
TOM1-210	ENST00000449058	PLA2G4D	Q86XP0	818 aa		19.83	■□□□□ 0.77
TOM1-210	ENST00000449058	ENGASE	Q8NFI3	743 aa		19.83	■□□□□ 0.77
TOM1-210	ENST00000449058	SLC4A9	Q96Q91	983 aa		19.83	■□□□□ 0.77
TOM1-210	ENST00000449058	HPS5	Q9UPZ3	1129 aa		19.83	■□□□□ 0.77
TOM1-210	ENST00000449058	C4A	P0C0L4	1744 aa		19.83	■□□□□ 0.76
TOM1-210	ENST00000449058	C4B	P0C0L5	1744 aa		19.83	■□□□□ 0.76
TOM1-210	ENST00000449058	ANKRD18B	A2A2Z9	1011 aa		19.83	■□□□□ 0.76
TOM1-210	ENST00000449058	GUCY1B3	Q02153	619 aa		19.83	■□□□□ 0.76
TOM1-210	ENST00000449058	NCOA7	Q8NI08	942 aa		19.83	■□□□□ 0.76
TOM1-210	ENST00000449058	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	19.83	■□□□□ 0.76
TOM1-210	ENST00000449058	PYCARD	Q9ULZ3	195 aa		19.83	■□□□□ 0.76
TOM1-210	ENST00000449058	ADD2	P35612	726 aa		19.82	■□□□□ 0.76
TOM1-210	ENST00000449058	ZNF75D	P51815	510 aa		19.82	■□□□□ 0.76
TOM1-210	ENST00000449058	PPFIA3	O75145	1194 aa		19.81	■□□□□ 0.76
TOM1-210	ENST00000449058	DNTTIP2	Q5QJE6	756 aa	Known RBP	19.81	■□□□□ 0.76
TOM1-210	ENST00000449058	ZSCAN25	Q6NSZ9	544 aa		19.81	■□□□□ 0.76
TOM1-210	ENST00000449058	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	19.81	■□□□□ 0.76
TOM1-210	ENST00000449058	PRIMPOL	Q96LW4	560 aa		19.81	■□□□□ 0.76
TOM1-210	ENST00000449058	RTEL1	Q9NZ71	1219 aa		19.81	■□□□□ 0.76
TOM1-210	ENST00000449058	LRP5	O75197	1615 aa		19.81	■□□□□ 0.76
TOM1-210	ENST00000449058	ARAP2	Q8WZ64	1704 aa		19.81	■□□□□ 0.76
TOM1-210	ENST00000449058	PLCH1	Q4KWH8	1693 aa		19.81	■□□□□ 0.76
TOM1-210	ENST00000449058	KLF18	A0A0U1RQI7	1052 aa		19.81	■□□□□ 0.76
TOM1-210	ENST00000449058	ZNF213	O14771	459 aa		19.81	■□□□□ 0.76
TOM1-210	ENST00000449058	DHX16	O60231	1041 aa	Known RBP	19.81	■□□□□ 0.76
TOM1-210	ENST00000449058	FAM160A1	Q05DH4	1040 aa		19.81	■□□□□ 0.76
TOM1-210	ENST00000449058	CCDC73	Q6ZRK6	1079 aa		19.81	■□□□□ 0.76
TOM1-210	ENST00000449058	BTG4	Q9NY30	223 aa		19.81	■□□□□ 0.76
TOM1-210	ENST00000449058	IRS4	O14654	1257 aa	Predicted RBP	19.8	■□□□□ 0.76
TOM1-210	ENST00000449058	IQCB1	Q15051	598 aa		19.8	■□□□□ 0.76
TOM1-210	ENST00000449058	MYRIP	Q8NFW9	859 aa		19.8	■□□□□ 0.76
TOM1-210	ENST00000449058	PDCL3	Q9H2J4	239 aa		19.8	■□□□□ 0.76
TOM1-210	ENST00000449058	GOLGA8B	A8MQT2	603 aa		19.8	■□□□□ 0.76
TOM1-210	ENST00000449058	TTF1	Q15361	905 aa	Predicted RBP	19.8	■□□□□ 0.76
TOM1-210	ENST00000449058	RALYL	Q86SE5	291 aa	Known RBP	19.8	■□□□□ 0.76
TOM1-210	ENST00000449058	NBPF3	Q9H094	633 aa		19.8	■□□□□ 0.76
TOM1-210	ENST00000449058	CNNM1	Q9NRU3	951 aa		19.8	■□□□□ 0.76
TOM1-210	ENST00000449058	COL14A1	Q05707	1796 aa	Known RBP	19.8	■□□□□ 0.76
TOM1-210	ENST00000449058	PTGS1	P23219	599 aa		19.79	■□□□□ 0.76
TOM1-210	ENST00000449058	PDE8B	O95263	885 aa		19.79	■□□□□ 0.76
TOM1-210	ENST00000449058	STX1A	Q16623	288 aa		19.79	■□□□□ 0.76
TOM1-210	ENST00000449058	FBXO18	Q8NFZ0	1043 aa		19.79	■□□□□ 0.76
TOM1-210	ENST00000449058	TRIM5	Q9C035	493 aa		19.79	■□□□□ 0.76
TOM1-210	ENST00000449058	ZBTB1	Q9Y2K1	713 aa		19.79	■□□□□ 0.76
TOM1-210	ENST00000449058	ERVV-1	B6SEH8	477 aa		19.78	■□□□□ 0.76
TOM1-210	ENST00000449058	PDE8A	O60658	829 aa		19.78	■□□□□ 0.76
TOM1-210	ENST00000449058	KIN	O60870	393 aa	Known RBP	19.78	■□□□□ 0.76
TOM1-210	ENST00000449058	ME1	P48163	572 aa		19.78	■□□□□ 0.76
TOM1-210	ENST00000449058	UBE3C	Q15386	1083 aa		19.78	■□□□□ 0.76
TOM1-210	ENST00000449058	SLC9C2	Q5TAH2	1124 aa		19.78	■□□□□ 0.76
TOM1-210	ENST00000449058	RGS22	Q8NE09	1264 aa		19.78	■□□□□ 0.76
TOM1-210	ENST00000449058	C8orf76	Q96K31	380 aa		19.78	■□□□□ 0.76
TOM1-210	ENST00000449058	PIH1D3	Q9NQM4	214 aa	Known RBP	19.78	■□□□□ 0.76
TOM1-210	ENST00000449058	TRMT112	Q9UI30	125 aa	Known RBP	19.78	■□□□□ 0.76
TOM1-210	ENST00000449058	PCDHA7	Q9UN72	937 aa		19.78	■□□□□ 0.76
TOM1-210	ENST00000449058	ARID4A	P29374	1257 aa	Predicted RBP	19.78	■□□□□ 0.76
TOM1-210	ENST00000449058	C11orf57	Q6ZUT1	292 aa	Predicted RBP	19.78	■□□□□ 0.76
TOM1-210	ENST00000449058	FSIP1	Q8NA03	581 aa		19.78	■□□□□ 0.76
TOM1-210	ENST00000449058	ORC3	Q9UBD5	711 aa	Predicted RBP	19.78	■□□□□ 0.76
TOM1-210	ENST00000449058		A0A1W2PQ27	194 aa		19.77	■□□□□ 0.76
TOM1-210	ENST00000449058		A0A1W2PQ64	194 aa		19.77	■□□□□ 0.76
TOM1-210	ENST00000449058		A0A1W2PQD8	194 aa		19.77	■□□□□ 0.76
TOM1-210	ENST00000449058	RBM10	P98175	930 aa	Known RBP	19.77	■□□□□ 0.76
TOM1-210	ENST00000449058	ADAL	Q6DHV7	355 aa		19.77	■□□□□ 0.76
TOM1-210	ENST00000449058	SARM1	Q6SZW1	724 aa		19.77	■□□□□ 0.76
TOM1-210	ENST00000449058	FMR1NB	Q8N0W7	255 aa	Predicted RBP	19.77	■□□□□ 0.76
TOM1-210	ENST00000449058	WNK3	Q9BYP7	1800 aa		19.77	■□□□□ 0.76

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