RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 GAS2L3Q86XJ1 694 aa23.09■■□□□ 1.29
FAM3A-215ENST00000447601 SETDB2Q96T68 719 aa23.09■■□□□ 1.29
FAM3A-215ENST00000447601 LRRC2Q9BYS8 371 aa23.09■■□□□ 1.29
FAM3A-215ENST00000447601 AKAP11Q9UKA4 1901 aa23.09■■□□□ 1.29
FAM3A-215ENST00000447601 ONECUT3O60422 494 aaPredicted RBP23.08■■□□□ 1.29
FAM3A-215ENST00000447601 PFKFB2O60825 505 aa23.08■■□□□ 1.29
FAM3A-215ENST00000447601 MAP3K12Q12852 859 aa23.08■■□□□ 1.29
FAM3A-215ENST00000447601 CSPP1Q1MSJ5 1256 aa23.08■■□□□ 1.29
FAM3A-215ENST00000447601 FAM182BQ5T319 152 aa23.08■■□□□ 1.29
FAM3A-215ENST00000447601 USP48Q86UV5 1035 aa23.08■■□□□ 1.29
FAM3A-215ENST00000447601 FBXL16Q8N461 479 aa23.08■■□□□ 1.29
FAM3A-215ENST00000447601 LLPHQ9BRT6 129 aaKnown RBP23.08■■□□□ 1.29
FAM3A-215ENST00000447601 SNAP23O00161 211 aa23.08■■□□□ 1.28
FAM3A-215ENST00000447601 CHMP4CQ96CF2 233 aa23.08■■□□□ 1.28
FAM3A-215ENST00000447601 BSDC1Q9NW68 430 aaPredicted RBP23.08■■□□□ 1.28
FAM3A-215ENST00000447601 TRPC5Q9UL62 973 aaPredicted RBP23.08■■□□□ 1.28
FAM3A-215ENST00000447601 TCRBV5S4A2TA0A5A2 114 aa23.07■■□□□ 1.28
FAM3A-215ENST00000447601 ZNF213O14771 459 aa23.07■■□□□ 1.28
FAM3A-215ENST00000447601 GDPD2Q9HCC8 539 aa23.07■■□□□ 1.28
FAM3A-215ENST00000447601 SRP68Q9UHB9 627 aaKnown RBP23.07■■□□□ 1.28
FAM3A-215ENST00000447601 WWC3Q9ULE0 1092 aa23.07■■□□□ 1.28
FAM3A-215ENST00000447601 HSPA1LP34931 641 aa23.06■■□□□ 1.28
FAM3A-215ENST00000447601 C3orf67Q6ZVT6 689 aa23.06■■□□□ 1.28
FAM3A-215ENST00000447601 SYAP1Q96A49 352 aaPredicted RBP23.06■■□□□ 1.28
FAM3A-215ENST00000447601 CNPY2Q9Y2B0 182 aa23.06■■□□□ 1.28
FAM3A-215ENST00000447601 BCAMP50895 628 aa23.05■■□□□ 1.28
FAM3A-215ENST00000447601 NBPF5PQ86XG9 351 aaPredicted RBP23.05■■□□□ 1.28
FAM3A-215ENST00000447601 AIDAQ96BJ3 306 aa23.05■■□□□ 1.28
FAM3A-215ENST00000447601 DTNBO60941 627 aa23.05■■□□□ 1.28
FAM3A-215ENST00000447601 HAND2P61296 217 aa23.05■■□□□ 1.28
FAM3A-215ENST00000447601 APOBRQ0VD83 1088 aa23.05■■□□□ 1.28
FAM3A-215ENST00000447601 SCRN1Q12765 414 aa23.05■■□□□ 1.28
FAM3A-215ENST00000447601 SMIM5Q71RC9 77 aa23.05■■□□□ 1.28
FAM3A-215ENST00000447601 NCOA7Q8NI08 942 aa23.05■■□□□ 1.28
FAM3A-215ENST00000447601 ZNF274Q96GC6 653 aaPredicted RBP23.05■■□□□ 1.28
FAM3A-215ENST00000447601 TMEM63CQ9P1W3 806 aa23.05■■□□□ 1.28
FAM3A-215ENST00000447601 RBM27Q9P2N5 1060 aaKnown RBP23.05■■□□□ 1.28
FAM3A-215ENST00000447601 NSFL1CQ9UNZ2 370 aaKnown RBP23.05■■□□□ 1.28
FAM3A-215ENST00000447601 UBE4AQ14139 1066 aa23.04■■□□□ 1.28
FAM3A-215ENST00000447601 RALYLQ86SE5 291 aaKnown RBP23.04■■□□□ 1.28
FAM3A-215ENST00000447601 MCM5P33992 734 aa23.03■■□□□ 1.28
FAM3A-215ENST00000447601 TPTE2Q6XPS3 522 aa23.03■■□□□ 1.28
FAM3A-215ENST00000447601 CDC37L1Q7L3B6 337 aa23.03■■□□□ 1.28
FAM3A-215ENST00000447601 SEPT12Q8IYM1 358 aa23.03■■□□□ 1.28
FAM3A-215ENST00000447601 NLRP3Q96P20 1036 aa23.03■■□□□ 1.28
FAM3A-215ENST00000447601 WDR19Q8NEZ3 1342 aa23.03■■□□□ 1.28
FAM3A-215ENST00000447601 MYH7P12883 1935 aa23.03■■□□□ 1.28
FAM3A-215ENST00000447601 JAK2O60674 1132 aa23.03■■□□□ 1.28
FAM3A-215ENST00000447601 MB21D2Q8IYB1 491 aaPredicted RBP23.03■■□□□ 1.28
FAM3A-215ENST00000447601 MAGEB6Q8N7X4 407 aa23.03■■□□□ 1.28
FAM3A-215ENST00000447601 SMARCC2Q8TAQ2 1214 aa23.03■■□□□ 1.28
FAM3A-215ENST00000447601 ARHGEF1Q92888 912 aaKnown RBP23.03■■□□□ 1.28
FAM3A-215ENST00000447601 STRBPQ96SI9 672 aaKnown RBP23.03■■□□□ 1.28
FAM3A-215ENST00000447601 GNL3LQ9NVN8 582 aaKnown RBP23.03■■□□□ 1.28
FAM3A-215ENST00000447601 KIF3AQ9Y496 699 aa23.03■■□□□ 1.28
FAM3A-215ENST00000447601 APPP05067 770 aa23.02■■□□□ 1.28
FAM3A-215ENST00000447601 EVCP57679 992 aa23.02■■□□□ 1.28
FAM3A-215ENST00000447601 UBE2HP62256 183 aa23.02■■□□□ 1.28
FAM3A-215ENST00000447601 HMGN5P82970 282 aaKnown RBP23.02■■□□□ 1.28
FAM3A-215ENST00000447601 DNM1Q05193 864 aaKnown RBP23.02■■□□□ 1.28
FAM3A-215ENST00000447601 ZNF804BA4D1E1 1349 aa23.02■■□□□ 1.28
FAM3A-215ENST00000447601 ZMYM6O95789 1325 aa23.02■■□□□ 1.28
FAM3A-215ENST00000447601 FIBPO43427 364 aa23.01■■□□□ 1.27
FAM3A-215ENST00000447601 GADD45BO75293 160 aaPredicted RBP23.01■■□□□ 1.27
FAM3A-215ENST00000447601 TRDNQ13061 729 aa23.01■■□□□ 1.27
FAM3A-215ENST00000447601 ALX1Q15699 326 aa23.01■■□□□ 1.27
FAM3A-215ENST00000447601 FAM184AQ8NB25 1140 aa23.01■■□□□ 1.27
FAM3A-215ENST00000447601 PANK2Q9BZ23 570 aa23.01■■□□□ 1.27
FAM3A-215ENST00000447601 BCL11BQ9C0K0 894 aaPredicted RBP23.01■■□□□ 1.27
FAM3A-215ENST00000447601 MINPP1Q9UNW1 487 aa23.01■■□□□ 1.27
FAM3A-215ENST00000447601 PRC1O43663 620 aa23.01■■□□□ 1.27
FAM3A-215ENST00000447601 PDIA3P30101 505 aaKnown RBP23.01■■□□□ 1.27
FAM3A-215ENST00000447601 CHST3Q7LGC8 479 aa23.01■■□□□ 1.27
FAM3A-215ENST00000447601 COL24A1Q17RW2 1714 aa23■■□□□ 1.27
FAM3A-215ENST00000447601 RFC4P35249 363 aa23■■□□□ 1.27
FAM3A-215ENST00000447601 KRT85P78386 507 aa23■■□□□ 1.27
FAM3A-215ENST00000447601 CAVIN4Q5BKX8 364 aa23■■□□□ 1.27
FAM3A-215ENST00000447601 NSUN7Q8NE18 718 aaKnown RBP23■■□□□ 1.27
FAM3A-215ENST00000447601 CELF1Q92879 486 aaKnown RBP23■■□□□ 1.27
FAM3A-215ENST00000447601 COL4A1P02462 1669 aa22.99■■□□□ 1.27
FAM3A-215ENST00000447601 PHF14O94880 888 aa22.99■■□□□ 1.27
FAM3A-215ENST00000447601 TRAPPC3LQ5T215 181 aa22.99■■□□□ 1.27
FAM3A-215ENST00000447601 LY75O60449 1722 aa22.99■■□□□ 1.27
FAM3A-215ENST00000447601 PATL2C9JE40 543 aaKnown RBP22.98■■□□□ 1.27
FAM3A-215ENST00000447601 MBD4O95243 580 aa22.98■■□□□ 1.27
FAM3A-215ENST00000447601 GNAT2P19087 354 aa22.98■■□□□ 1.27
FAM3A-215ENST00000447601 RPS8P62241 208 aaKnown RBP22.98■■□□□ 1.27
FAM3A-215ENST00000447601 LRSAM1Q6UWE0 723 aa22.98■■□□□ 1.27
FAM3A-215ENST00000447601 LRP2BPQ9P2M1 347 aa22.98■■□□□ 1.27
FAM3A-215ENST00000447601 NAP1L2Q9ULW6 460 aaPredicted RBP22.98■■□□□ 1.27
FAM3A-215ENST00000447601 LAMA4Q16363 1823 aa22.98■■□□□ 1.27
FAM3A-215ENST00000447601 PTPDC1A2A3K4 754 aa22.98■■□□□ 1.27
FAM3A-215ENST00000447601 H3BQV1 296 aa22.98■■□□□ 1.27
FAM3A-215ENST00000447601 IFFO2Q5TF58 517 aa22.98■■□□□ 1.27
FAM3A-215ENST00000447601 FERMT3Q86UX7 667 aa22.98■■□□□ 1.27
FAM3A-215ENST00000447601 AMIGO3Q86WK7 504 aa22.98■■□□□ 1.27
FAM3A-215ENST00000447601 DDX11Q96FC9 970 aa22.98■■□□□ 1.27
FAM3A-215ENST00000447601 PNPLA7Q6ZV29 1317 aa22.97■■□□□ 1.27
FAM3A-215ENST00000447601 ADRA2BP18089 450 aa22.97■■□□□ 1.27
FAM3A-215ENST00000447601 CCT2P78371 535 aaKnown RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms