RNA–Protein interactions for RNA: ENST00000444739.6

CASP4-203, Transcript of caspase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP4, Length 2,158 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-203ENST00000444739 MRFAP1Q9Y605 127 aa11.61□□□□□ -0.55
CASP4-203ENST00000444739 RFX7Q2KHR2 1363 aa11.61□□□□□ -0.55
CASP4-203ENST00000444739 UTYO14607 1347 aa11.61□□□□□ -0.55
CASP4-203ENST00000444739 H3BQF6 201 aa11.61□□□□□ -0.55
CASP4-203ENST00000444739 ZSCAN12O43309 604 aa11.61□□□□□ -0.55
CASP4-203ENST00000444739 CASQ1P31415 396 aa11.61□□□□□ -0.55
CASP4-203ENST00000444739 TNNT3P45378 269 aaPredicted RBP11.61□□□□□ -0.55
CASP4-203ENST00000444739 WDR24Q96S15 920 aa11.61□□□□□ -0.55
CASP4-203ENST00000444739 NCOA5Q9HCD5 579 aaKnown RBP11.61□□□□□ -0.55
CASP4-203ENST00000444739 CARMIL3Q8ND23 1372 aa11.61□□□□□ -0.55
CASP4-203ENST00000444739 CHGBP05060 677 aa11.6□□□□□ -0.55
CASP4-203ENST00000444739 HMGB1P09429 215 aaKnown RBP11.6□□□□□ -0.55
CASP4-203ENST00000444739 CCT2P78371 535 aaKnown RBP11.6□□□□□ -0.55
CASP4-203ENST00000444739 PPP2R3AQ06190 1150 aa11.6□□□□□ -0.55
CASP4-203ENST00000444739 KSR2Q6VAB6 950 aa11.6□□□□□ -0.55
CASP4-203ENST00000444739 DHX32Q7L7V1 743 aaKnown RBP11.6□□□□□ -0.55
CASP4-203ENST00000444739 RABGGTAQ92696 567 aa11.6□□□□□ -0.55
CASP4-203ENST00000444739 PPP2R2CQ9Y2T4 447 aa11.6□□□□□ -0.55
CASP4-203ENST00000444739 RGPD8O14715 1765 aaPredicted RBP11.6□□□□□ -0.55
CASP4-203ENST00000444739 GRM8O00222 908 aa11.6□□□□□ -0.55
CASP4-203ENST00000444739 MAP2K7O14733 419 aa11.6□□□□□ -0.55
CASP4-203ENST00000444739 DHX16O60231 1041 aaKnown RBP11.6□□□□□ -0.55
CASP4-203ENST00000444739 ZNF202O95125 648 aa11.6□□□□□ -0.55
CASP4-203ENST00000444739 UBASH3AP57075 661 aa11.6□□□□□ -0.55
CASP4-203ENST00000444739 EXOSC10Q01780 885 aaKnown RBP11.6□□□□□ -0.55
CASP4-203ENST00000444739 VSTM4Q8IW00 320 aa11.6□□□□□ -0.55
CASP4-203ENST00000444739 KCNG4Q8TDN1 519 aa11.6□□□□□ -0.55
CASP4-203ENST00000444739 KIFC2Q96AC6 838 aa11.6□□□□□ -0.55
CASP4-203ENST00000444739 LGR6Q9HBX8 967 aa11.6□□□□□ -0.55
CASP4-203ENST00000444739 DBF4Q9UBU7 674 aaPredicted RBP11.6□□□□□ -0.55
CASP4-203ENST00000444739 RRP15Q9Y3B9 282 aaKnown RBP11.6□□□□□ -0.55
CASP4-203ENST00000444739 CLIC4Q9Y696 253 aa11.6□□□□□ -0.55
CASP4-203ENST00000444739 ARHGAP6O43182 974 aa11.59□□□□□ -0.55
CASP4-203ENST00000444739 CBFA2T2O43439 604 aa11.59□□□□□ -0.55
CASP4-203ENST00000444739 PPFIA3O75145 1194 aa11.59□□□□□ -0.55
CASP4-203ENST00000444739 YEATS4O95619 227 aa11.59□□□□□ -0.55
CASP4-203ENST00000444739 ATP5JP18859 108 aa11.59□□□□□ -0.55
CASP4-203ENST00000444739 ACTN2P35609 894 aa11.59□□□□□ -0.55
CASP4-203ENST00000444739 LMAN1P49257 510 aa11.59□□□□□ -0.55
CASP4-203ENST00000444739 IRX3P78415 501 aaPredicted RBP11.59□□□□□ -0.55
CASP4-203ENST00000444739 GOLGA8FQ08AF8 430 aa11.59□□□□□ -0.55
CASP4-203ENST00000444739 GOLGA8DPQ0D2H9 430 aa11.59□□□□□ -0.55
CASP4-203ENST00000444739 STK38Q15208 465 aa11.59□□□□□ -0.55
CASP4-203ENST00000444739 LONRF2Q1L5Z9 754 aa11.59□□□□□ -0.55
CASP4-203ENST00000444739 PROSER3Q2NL68 480 aa11.59□□□□□ -0.55
CASP4-203ENST00000444739 POLR3EQ9NVU0 708 aa11.59□□□□□ -0.55
CASP4-203ENST00000444739 DIP2BQ9P265 1576 aa11.58□□□□□ -0.56
CASP4-203ENST00000444739 PLEKHG2Q9H7P9 1386 aa11.58□□□□□ -0.56
CASP4-203ENST00000444739 CCDC151A5D8V7 595 aa11.58□□□□□ -0.56
CASP4-203ENST00000444739 FDPSP14324 419 aaKnown RBP11.58□□□□□ -0.56
CASP4-203ENST00000444739 GNL2Q13823 731 aaKnown RBP11.58□□□□□ -0.56
CASP4-203ENST00000444739 MCMDC2Q4G0Z9 681 aa11.58□□□□□ -0.56
CASP4-203ENST00000444739 CERS3Q8IU89 383 aa11.58□□□□□ -0.56
CASP4-203ENST00000444739 FAM177A1Q8N128 213 aaPredicted RBP11.58□□□□□ -0.56
CASP4-203ENST00000444739 LMO7Q8WWI1 1683 aa11.58□□□□□ -0.56
CASP4-203ENST00000444739 GOLGA6L9A6NEM1 432 aa11.58□□□□□ -0.56
CASP4-203ENST00000444739 TMEM232C9JQI7 657 aa11.58□□□□□ -0.56
CASP4-203ENST00000444739 SPTLC2O15270 562 aa11.58□□□□□ -0.56
CASP4-203ENST00000444739 PDIA3P30101 505 aaKnown RBP11.58□□□□□ -0.56
CASP4-203ENST00000444739 TXLNAP40222 546 aa11.58□□□□□ -0.56
CASP4-203ENST00000444739 GNG11P61952 73 aa11.58□□□□□ -0.56
CASP4-203ENST00000444739 SF3A1Q15459 793 aaKnown RBP11.58□□□□□ -0.56
CASP4-203ENST00000444739 JAKMIP3Q5VZ66 844 aa11.58□□□□□ -0.56
CASP4-203ENST00000444739 LINS1Q8NG48 757 aa11.58□□□□□ -0.56
CASP4-203ENST00000444739 KLHDC4Q8TBB5 520 aa11.58□□□□□ -0.56
CASP4-203ENST00000444739 GOLGA1Q92805 767 aa11.58□□□□□ -0.56
CASP4-203ENST00000444739 ADAMTS13Q76LX8 1427 aa11.58□□□□□ -0.56
CASP4-203ENST00000444739 USP54Q70EL1 1684 aa11.57□□□□□ -0.56
CASP4-203ENST00000444739 SERPINC1P01008 464 aa11.57□□□□□ -0.56
CASP4-203ENST00000444739 TOP1P11387 765 aaKnown RBP11.57□□□□□ -0.56
CASP4-203ENST00000444739 MYL5Q02045 173 aa11.57□□□□□ -0.56
CASP4-203ENST00000444739 BRD3Q15059 726 aa11.57□□□□□ -0.56
CASP4-203ENST00000444739 CFAP100Q494V2 611 aa11.57□□□□□ -0.56
CASP4-203ENST00000444739 AXDND1Q5T1B0 1012 aaPredicted RBP11.57□□□□□ -0.56
CASP4-203ENST00000444739 USHBP1Q8N6Y0 703 aa11.57□□□□□ -0.56
CASP4-203ENST00000444739 ZNF274Q96GC6 653 aaPredicted RBP11.57□□□□□ -0.56
CASP4-203ENST00000444739 TUBE1Q9UJT0 475 aa11.57□□□□□ -0.56
CASP4-203ENST00000444739 DBNLQ9UJU6 430 aaKnown RBP11.57□□□□□ -0.56
CASP4-203ENST00000444739 NDUFB9Q9Y6M9 179 aa11.57□□□□□ -0.56
CASP4-203ENST00000444739 PFKFB1P16118 471 aa11.57□□□□□ -0.56
CASP4-203ENST00000444739 TBX2Q13207 712 aaPredicted RBP11.57□□□□□ -0.56
CASP4-203ENST00000444739 ISM2Q6H9L7 571 aa11.57□□□□□ -0.56
CASP4-203ENST00000444739 CTR9Q6PD62 1173 aa11.57□□□□□ -0.56
CASP4-203ENST00000444739 DHX58Q96C10 678 aa11.57□□□□□ -0.56
CASP4-203ENST00000444739 LTV1Q96GA3 475 aaPredicted RBP11.57□□□□□ -0.56
CASP4-203ENST00000444739 YY1AP1Q9H869 796 aa11.57□□□□□ -0.56
CASP4-203ENST00000444739 INTS13Q9NVM9 706 aa11.57□□□□□ -0.56
CASP4-203ENST00000444739 MROH7-TTC4A0A0A0MT08 1334 aa11.56□□□□□ -0.56
CASP4-203ENST00000444739 RPS6KA5O75582 802 aa11.56□□□□□ -0.56
CASP4-203ENST00000444739 CMA1P23946 247 aa11.56□□□□□ -0.56
CASP4-203ENST00000444739 PTPN21Q16825 1174 aa11.56□□□□□ -0.56
CASP4-203ENST00000444739 MYSM1Q5VVJ2 828 aa11.56□□□□□ -0.56
CASP4-203ENST00000444739 OTUD7BQ6GQQ9 843 aa11.56□□□□□ -0.56
CASP4-203ENST00000444739 HNRNPLLQ8WVV9 542 aaKnown RBP11.56□□□□□ -0.56
CASP4-203ENST00000444739 SH3TC1Q8TE82 1336 aa11.56□□□□□ -0.56
CASP4-203ENST00000444739 BTBD11A6QL63 1104 aa11.55□□□□□ -0.56
CASP4-203ENST00000444739 MYO1BO43795 1136 aa11.55□□□□□ -0.56
CASP4-203ENST00000444739 POLR3DP05423 398 aaPredicted RBP11.55□□□□□ -0.56
CASP4-203ENST00000444739 IVLP07476 585 aa11.55□□□□□ -0.56
CASP4-203ENST00000444739 NLRP6P59044 892 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms