RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 USP28Q96RU2 1077 aa5.72□□□□□ -1.49
HERC1-201ENST00000443617 IL25Q9H293 177 aa5.72□□□□□ -1.49
HERC1-201ENST00000443617 BICC1Q9H694 974 aaKnown RBP5.72□□□□□ -1.49
HERC1-201ENST00000443617 ERBB3P21860 1342 aa5.72□□□□□ -1.49
HERC1-201ENST00000443617 A0A1W2PP64 1363 aa5.72□□□□□ -1.49
HERC1-201ENST00000443617 PLXNC1O60486 1568 aa5.72□□□□□ -1.49
HERC1-201ENST00000443617 PPFIA1Q13136 1202 aa5.72□□□□□ -1.49
HERC1-201ENST00000443617 GDAP1L1Q96MZ0 367 aa5.72□□□□□ -1.49
HERC1-201ENST00000443617 STX10O60499 249 aa5.72□□□□□ -1.49
HERC1-201ENST00000443617 CKAP4Q07065 602 aaKnown RBP5.72□□□□□ -1.49
HERC1-201ENST00000443617 IQSEC2Q5JU85 1478 aa5.72□□□□□ -1.49
HERC1-201ENST00000443617 MAP4K1Q92918 833 aa5.72□□□□□ -1.49
HERC1-201ENST00000443617 NCOA5Q9HCD5 579 aaKnown RBP5.72□□□□□ -1.49
HERC1-201ENST00000443617 ATP10AO60312 1499 aa5.72□□□□□ -1.49
HERC1-201ENST00000443617 PTPDC1A2A3K4 754 aa5.72□□□□□ -1.49
HERC1-201ENST00000443617 VWA3AA6NCI4 1184 aa5.72□□□□□ -1.49
HERC1-201ENST00000443617 KIAA1328Q86T90 577 aa5.72□□□□□ -1.49
HERC1-201ENST00000443617 IKBKBO14920 756 aa5.72□□□□□ -1.49
HERC1-201ENST00000443617 ZEB2O60315 1214 aa5.72□□□□□ -1.49
HERC1-201ENST00000443617 GNGT1P63211 74 aa5.72□□□□□ -1.49
HERC1-201ENST00000443617 SPECC1LQ69YQ0 1117 aa5.72□□□□□ -1.49
HERC1-201ENST00000443617 ALDH8A1Q9H2A2 487 aaPredicted RBP5.71□□□□□ -1.49
HERC1-201ENST00000443617 NDUFAB1O14561 156 aa5.71□□□□□ -1.49
HERC1-201ENST00000443617 PNKPQ96T60 521 aa5.71□□□□□ -1.49
HERC1-201ENST00000443617 KCNH3Q9ULD8 1083 aa5.71□□□□□ -1.49
HERC1-201ENST00000443617 SPATS2Q86XZ4 545 aaKnown RBP5.71□□□□□ -1.49
HERC1-201ENST00000443617 NUTM2AQ8IVF1 878 aaPredicted RBP5.71□□□□□ -1.49
HERC1-201ENST00000443617 ANKRD18AQ8IVF6 992 aa5.71□□□□□ -1.49
HERC1-201ENST00000443617 ATG3Q9NT62 314 aa5.71□□□□□ -1.49
HERC1-201ENST00000443617 ODF2LQ9ULJ1 636 aa5.71□□□□□ -1.49
HERC1-201ENST00000443617 SYNMO15061 1565 aa5.71□□□□□ -1.49
HERC1-201ENST00000443617 TTF2Q9UNY4 1162 aaKnown RBP5.71□□□□□ -1.5
HERC1-201ENST00000443617 TEFQ10587 303 aa5.71□□□□□ -1.5
HERC1-201ENST00000443617 HSF2BPO75031 334 aa5.71□□□□□ -1.5
HERC1-201ENST00000443617 TICAM2Q86XR7 235 aa5.71□□□□□ -1.5
HERC1-201ENST00000443617 GNL3LQ9NVN8 582 aaKnown RBP5.71□□□□□ -1.5
HERC1-201ENST00000443617 A0A1B0GUA9 196 aa5.71□□□□□ -1.5
HERC1-201ENST00000443617 GSCP56915 257 aaPredicted RBP5.71□□□□□ -1.5
HERC1-201ENST00000443617 GOLGA8BA8MQT2 603 aa5.71□□□□□ -1.5
HERC1-201ENST00000443617 KLHL10Q6JEL2 608 aa5.71□□□□□ -1.5
HERC1-201ENST00000443617 PI4K2BQ8TCG2 481 aa5.71□□□□□ -1.5
HERC1-201ENST00000443617 HSP90AA4PQ58FG1 418 aa5.71□□□□□ -1.5
HERC1-201ENST00000443617 TMTC1Q8IUR5 882 aa5.71□□□□□ -1.5
HERC1-201ENST00000443617 SIRT1Q96EB6 747 aa5.71□□□□□ -1.5
HERC1-201ENST00000443617 RSRC1Q96IZ7 334 aaKnown RBP5.71□□□□□ -1.5
HERC1-201ENST00000443617 GUCA1BQ9UMX6 200 aa5.71□□□□□ -1.5
HERC1-201ENST00000443617 N4BP3O15049 544 aa5.71□□□□□ -1.5
HERC1-201ENST00000443617 TAF5LO75529 589 aa5.71□□□□□ -1.5
HERC1-201ENST00000443617 CPP00450 1065 aa5.71□□□□□ -1.5
HERC1-201ENST00000443617 NEDD9Q14511 834 aa5.71□□□□□ -1.5
HERC1-201ENST00000443617 LTV1Q96GA3 475 aaPredicted RBP5.71□□□□□ -1.5
HERC1-201ENST00000443617 ZRANB1Q9UGI0 708 aa5.71□□□□□ -1.5
HERC1-201ENST00000443617 PNPLA6Q8IY17 1366 aa5.71□□□□□ -1.5
HERC1-201ENST00000443617 CDKL5O76039 1030 aa5.71□□□□□ -1.5
HERC1-201ENST00000443617 NAP1L1P55209 391 aaKnown RBP5.71□□□□□ -1.5
HERC1-201ENST00000443617 EXOC5O00471 708 aa5.71□□□□□ -1.5
HERC1-201ENST00000443617 ALS2CLQ60I27 953 aa5.71□□□□□ -1.5
HERC1-201ENST00000443617 RBM33Q96EV2 1170 aaKnown RBP5.71□□□□□ -1.5
HERC1-201ENST00000443617 NUP88Q99567 741 aaPredicted RBP5.71□□□□□ -1.5
HERC1-201ENST00000443617 PIP4K2AP48426 406 aaPredicted RBP5.7□□□□□ -1.5
HERC1-201ENST00000443617 ATP2B2Q01814 1243 aa5.7□□□□□ -1.5
HERC1-201ENST00000443617 OTUD7BQ6GQQ9 843 aa5.7□□□□□ -1.5
HERC1-201ENST00000443617 FMR1NBQ8N0W7 255 aaPredicted RBP5.7□□□□□ -1.5
HERC1-201ENST00000443617 CAPZA3Q96KX2 299 aa5.7□□□□□ -1.5
HERC1-201ENST00000443617 DISP1Q96F81 1524 aa5.7□□□□□ -1.5
HERC1-201ENST00000443617 LAMC3Q9Y6N6 1575 aa5.7□□□□□ -1.5
HERC1-201ENST00000443617 TOB2Q14106 344 aaPredicted RBP5.7□□□□□ -1.5
HERC1-201ENST00000443617 ANKRD24Q8TF21 1146 aa5.7□□□□□ -1.5
HERC1-201ENST00000443617 RAB21Q9UL25 225 aa5.7□□□□□ -1.5
HERC1-201ENST00000443617 GGCXP38435 758 aa5.7□□□□□ -1.5
HERC1-201ENST00000443617 EIF4A2Q14240 407 aaKnown RBP5.7□□□□□ -1.5
HERC1-201ENST00000443617 CNPY4Q8N129 248 aa5.7□□□□□ -1.5
HERC1-201ENST00000443617 CCDC8Q9H0W5 538 aaPredicted RBP5.7□□□□□ -1.5
HERC1-201ENST00000443617 FBXW10Q5XX13 1052 aa5.7□□□□□ -1.5
HERC1-201ENST00000443617 ARHGAP5Q13017 1502 aa5.7□□□□□ -1.5
HERC1-201ENST00000443617 TMCO5BA8MYB1 307 aa5.7□□□□□ -1.5
HERC1-201ENST00000443617 PNOCQ13519 176 aa5.7□□□□□ -1.5
HERC1-201ENST00000443617 SNCBQ16143 134 aa5.7□□□□□ -1.5
HERC1-201ENST00000443617 KAT14Q9H8E8 782 aa5.7□□□□□ -1.5
HERC1-201ENST00000443617 NFXL1Q6ZNB6 911 aa5.7□□□□□ -1.5
HERC1-201ENST00000443617 SLC52A1Q9NWF4 448 aa5.7□□□□□ -1.5
HERC1-201ENST00000443617 HPCAL4Q9UM19 191 aa5.7□□□□□ -1.5
HERC1-201ENST00000443617 ATRIPQ8WXE1 791 aa5.7□□□□□ -1.5
HERC1-201ENST00000443617 MAP3K5Q99683 1374 aa5.7□□□□□ -1.5
HERC1-201ENST00000443617 WWC3Q9ULE0 1092 aa5.7□□□□□ -1.5
HERC1-201ENST00000443617 SF3B2Q13435 895 aaKnown RBP5.7□□□□□ -1.5
HERC1-201ENST00000443617 MSL1Q68DK7 614 aa5.7□□□□□ -1.5
HERC1-201ENST00000443617 SND1Q7KZF4 910 aaKnown RBP eCLIP5.7□□□□□ -1.5
HERC1-201ENST00000443617 CNGA4Q8IV77 575 aa5.7□□□□□ -1.5
HERC1-201ENST00000443617 PFKFB1P16118 471 aa5.7□□□□□ -1.5
HERC1-201ENST00000443617 SCRN1Q12765 414 aa5.7□□□□□ -1.5
HERC1-201ENST00000443617 CYP26C1Q6V0L0 522 aa5.7□□□□□ -1.5
HERC1-201ENST00000443617 FAM212AQ96EL1 285 aa5.7□□□□□ -1.5
HERC1-201ENST00000443617 VIPAS39Q9H9C1 493 aa5.7□□□□□ -1.5
HERC1-201ENST00000443617 IFT88Q13099 833 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 MYO6Q9UM54 1294 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 BIRC2Q13490 618 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 IMMTQ16891 758 aaKnown RBP5.69□□□□□ -1.5
HERC1-201ENST00000443617 MCMDC2Q4G0Z9 681 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 KRI1Q8N9T8 703 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms