RNA–Protein interactions for RNA: ENST00000436140.2

LINC01516-201, Transcript of long intergenic non-protein coding RNA 1516, humanhuman

TSL 5 BASIC

Gene LINC01516, Length 2,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01516-201ENST00000436140 COL4A1P02462 1669 aa12.98□□□□□ -0.33
LINC01516-201ENST00000436140 RXRAP19793 462 aa12.98□□□□□ -0.33
LINC01516-201ENST00000436140 CYP7A1P22680 504 aa12.98□□□□□ -0.33
LINC01516-201ENST00000436140 TTC14Q96N46 770 aa12.98□□□□□ -0.33
LINC01516-201ENST00000436140 NCOA5Q9HCD5 579 aaKnown RBP12.98□□□□□ -0.33
LINC01516-201ENST00000436140 ZSWIM6Q9HCJ5 1215 aa12.98□□□□□ -0.33
LINC01516-201ENST00000436140 MED23Q9ULK4 1368 aa12.98□□□□□ -0.33
LINC01516-201ENST00000436140 MINDY4BA8MYZ0 360 aa12.97□□□□□ -0.33
LINC01516-201ENST00000436140 C6orf229H3BNL8 230 aa12.97□□□□□ -0.33
LINC01516-201ENST00000436140 MMP10P09238 476 aa12.97□□□□□ -0.33
LINC01516-201ENST00000436140 APOBRQ0VD83 1088 aa12.97□□□□□ -0.33
LINC01516-201ENST00000436140 APPBP2Q92624 585 aa12.97□□□□□ -0.33
LINC01516-201ENST00000436140 ZNF622Q969S3 477 aaKnown RBP eCLIP12.97□□□□□ -0.33
LINC01516-201ENST00000436140 ZDHHC9Q9Y397 364 aa12.97□□□□□ -0.33
LINC01516-201ENST00000436140 VPS37CA5D8V6 355 aaPredicted RBP12.97□□□□□ -0.33
LINC01516-201ENST00000436140 ADD2P35612 726 aa12.97□□□□□ -0.33
LINC01516-201ENST00000436140 DYNLL1P63167 89 aaKnown RBP12.97□□□□□ -0.33
LINC01516-201ENST00000436140 CTDSPL2Q05D32 466 aa12.97□□□□□ -0.33
LINC01516-201ENST00000436140 MAP3K12Q12852 859 aa12.97□□□□□ -0.33
LINC01516-201ENST00000436140 FAM173BQ6P4H8 233 aa12.97□□□□□ -0.33
LINC01516-201ENST00000436140 ADGRA1Q86SQ6 560 aa12.97□□□□□ -0.33
LINC01516-201ENST00000436140 HELLSQ9NRZ9 838 aa12.97□□□□□ -0.33
LINC01516-201ENST00000436140 SMC3Q9UQE7 1217 aa12.97□□□□□ -0.33
LINC01516-201ENST00000436140 U3KPZ7 1027 aaPredicted RBP12.97□□□□□ -0.33
LINC01516-201ENST00000436140 N4BP2Q86UW6 1770 aaPredicted RBP12.97□□□□□ -0.33
LINC01516-201ENST00000436140 UQCRFS1P1P0C7P4 283 aa12.96□□□□□ -0.33
LINC01516-201ENST00000436140 CCDC144CPQ8IYA2 1237 aa12.96□□□□□ -0.33
LINC01516-201ENST00000436140 ZKSCAN3Q9BRR0 538 aa12.96□□□□□ -0.33
LINC01516-201ENST00000436140 CARMIL3Q8ND23 1372 aa12.96□□□□□ -0.33
LINC01516-201ENST00000436140 CYP2D7A0A087X1C5 515 aa12.96□□□□□ -0.33
LINC01516-201ENST00000436140 E7EWF7 191 aa12.96□□□□□ -0.33
LINC01516-201ENST00000436140 FOXP2O15409 715 aa12.96□□□□□ -0.33
LINC01516-201ENST00000436140 PRPF40AO75400 957 aaKnown RBP12.96□□□□□ -0.33
LINC01516-201ENST00000436140 PSMA5P28066 241 aa12.96□□□□□ -0.33
LINC01516-201ENST00000436140 PRDX5P30044 214 aa12.96□□□□□ -0.33
LINC01516-201ENST00000436140 RAB3GAP1Q15042 981 aa12.96□□□□□ -0.33
LINC01516-201ENST00000436140 JAK2O60674 1132 aa12.96□□□□□ -0.34
LINC01516-201ENST00000436140 RPS6KB1P23443 525 aa12.96□□□□□ -0.34
LINC01516-201ENST00000436140 DDIT3P35638 169 aa12.96□□□□□ -0.34
LINC01516-201ENST00000436140 EVX2Q03828 476 aa12.96□□□□□ -0.34
LINC01516-201ENST00000436140 ILDR1Q86SU0 546 aaPredicted RBP12.96□□□□□ -0.34
LINC01516-201ENST00000436140 LCORLQ8N3X6 602 aa12.96□□□□□ -0.34
LINC01516-201ENST00000436140 BTAF1O14981 1849 aa12.95□□□□□ -0.34
LINC01516-201ENST00000436140 F8W031 263 aaPredicted RBP12.95□□□□□ -0.34
LINC01516-201ENST00000436140 ZNF213O14771 459 aa12.95□□□□□ -0.34
LINC01516-201ENST00000436140 GJB2P29033 226 aa12.95□□□□□ -0.34
LINC01516-201ENST00000436140 HIBADHP31937 336 aaKnown RBP12.95□□□□□ -0.34
LINC01516-201ENST00000436140 SLC10A5Q5PT55 438 aa12.95□□□□□ -0.34
LINC01516-201ENST00000436140 ANO8Q9HCE9 1232 aaPredicted RBP12.95□□□□□ -0.34
LINC01516-201ENST00000436140 PPP1R1BQ9UD71 204 aaPredicted RBP12.95□□□□□ -0.34
LINC01516-201ENST00000436140 ZNF804BA4D1E1 1349 aa12.95□□□□□ -0.34
LINC01516-201ENST00000436140 TRAK2O60296 914 aa12.95□□□□□ -0.34
LINC01516-201ENST00000436140 ST5P78524 1137 aa12.95□□□□□ -0.34
LINC01516-201ENST00000436140 TOB2Q14106 344 aaPredicted RBP12.95□□□□□ -0.34
LINC01516-201ENST00000436140 SLC4A4Q9Y6R1 1079 aa12.95□□□□□ -0.34
LINC01516-201ENST00000436140 PRDM1O75626 825 aa12.94□□□□□ -0.34
LINC01516-201ENST00000436140 UFL1O94874 794 aa12.94□□□□□ -0.34
LINC01516-201ENST00000436140 GUCY1B3Q02153 619 aa12.94□□□□□ -0.34
LINC01516-201ENST00000436140 SLC27A3Q5K4L6 730 aa12.94□□□□□ -0.34
LINC01516-201ENST00000436140 CCDC82Q8N4S0 544 aa12.94□□□□□ -0.34
LINC01516-201ENST00000436140 BAG4O95429 457 aaKnown RBP12.94□□□□□ -0.34
LINC01516-201ENST00000436140 ARID4AP29374 1257 aaPredicted RBP12.94□□□□□ -0.34
LINC01516-201ENST00000436140 TDO2P48775 406 aa12.94□□□□□ -0.34
LINC01516-201ENST00000436140 ST3GAL1Q11201 340 aa12.94□□□□□ -0.34
LINC01516-201ENST00000436140 GRIK5Q16478 980 aa12.94□□□□□ -0.34
LINC01516-201ENST00000436140 KLHL34Q8N239 644 aa12.94□□□□□ -0.34
LINC01516-201ENST00000436140 GNL3LQ9NVN8 582 aaKnown RBP12.94□□□□□ -0.34
LINC01516-201ENST00000436140 AATFQ9NY61 560 aaKnown RBP eCLIP12.94□□□□□ -0.34
LINC01516-201ENST00000436140 B4E1Z4 1266 aa12.93□□□□□ -0.34
LINC01516-201ENST00000436140 GPSM2P81274 684 aa12.93□□□□□ -0.34
LINC01516-201ENST00000436140 IMMTQ16891 758 aaKnown RBP12.93□□□□□ -0.34
LINC01516-201ENST00000436140 MCM2P49736 904 aa12.93□□□□□ -0.34
LINC01516-201ENST00000436140 TTF1Q15361 905 aaPredicted RBP12.93□□□□□ -0.34
LINC01516-201ENST00000436140 DIXDC1Q155Q3 683 aa12.93□□□□□ -0.34
LINC01516-201ENST00000436140 MYL10Q9BUA6 226 aa12.93□□□□□ -0.34
LINC01516-201ENST00000436140 POLRMTO00411 1230 aaKnown RBP12.93□□□□□ -0.34
LINC01516-201ENST00000436140 CHRNA5P30532 468 aa12.93□□□□□ -0.34
LINC01516-201ENST00000436140 DOK7Q18PE1 504 aa12.93□□□□□ -0.34
LINC01516-201ENST00000436140 LRRFIP1Q32MZ4 808 aaKnown RBP12.93□□□□□ -0.34
LINC01516-201ENST00000436140 GBP4Q96PP9 640 aa12.93□□□□□ -0.34
LINC01516-201ENST00000436140 NAPBQ9H115 298 aa12.93□□□□□ -0.34
LINC01516-201ENST00000436140 ZFYP08048 801 aaPredicted RBP12.92□□□□□ -0.34
LINC01516-201ENST00000436140 UBE4AQ14139 1066 aa12.92□□□□□ -0.34
LINC01516-201ENST00000436140 STRBPQ96SI9 672 aaKnown RBP12.92□□□□□ -0.34
LINC01516-201ENST00000436140 MXD3Q9BW11 206 aa12.92□□□□□ -0.34
LINC01516-201ENST00000436140 SENP2Q9HC62 589 aa12.92□□□□□ -0.34
LINC01516-201ENST00000436140 MTMR7Q9Y216 660 aa12.92□□□□□ -0.34
LINC01516-201ENST00000436140 WNK3Q9BYP7 1800 aa12.92□□□□□ -0.34
LINC01516-201ENST00000436140 SYT1P21579 422 aa12.92□□□□□ -0.34
LINC01516-201ENST00000436140 GRAPQ13588 217 aa12.92□□□□□ -0.34
LINC01516-201ENST00000436140 RALYLQ86SE5 291 aaKnown RBP12.92□□□□□ -0.34
LINC01516-201ENST00000436140 GRAPLQ8TC17 118 aaPredicted RBP12.92□□□□□ -0.34
LINC01516-201ENST00000436140 NUCB2P80303 420 aa12.91□□□□□ -0.34
LINC01516-201ENST00000436140 NAA16Q6N069 864 aaPredicted RBP12.91□□□□□ -0.34
LINC01516-201ENST00000436140 TBC1D10CQ8IV04 446 aa12.91□□□□□ -0.34
LINC01516-201ENST00000436140 DSCC1Q9BVC3 393 aa12.91□□□□□ -0.34
LINC01516-201ENST00000436140 DDX49Q9Y6V7 483 aaKnown RBP12.91□□□□□ -0.34
LINC01516-201ENST00000436140 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.91□□□□□ -0.34
LINC01516-201ENST00000436140 CEBPZQ03701 1054 aaKnown RBP12.91□□□□□ -0.34
LINC01516-201ENST00000436140 CUL4AQ13619 759 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms