RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 NLRP2Q9NX02 1062 aa9.44□□□□□ -0.9
HDAC9-213ENST00000433709 POLA1P09884 1462 aaPredicted RBP9.43□□□□□ -0.9
HDAC9-213ENST00000433709 DEAF1O75398 565 aaPredicted RBP9.43□□□□□ -0.9
HDAC9-213ENST00000433709 GRIA4P48058 902 aa9.43□□□□□ -0.9
HDAC9-213ENST00000433709 MFAP1P55081 439 aaKnown RBP9.43□□□□□ -0.9
HDAC9-213ENST00000433709 RAC1P63000 192 aa9.43□□□□□ -0.9
HDAC9-213ENST00000433709 GRM2Q14416 872 aa9.43□□□□□ -0.9
HDAC9-213ENST00000433709 SPRED3Q2MJR0 410 aa9.43□□□□□ -0.9
HDAC9-213ENST00000433709 PRRT3Q5FWE3 981 aa9.43□□□□□ -0.9
HDAC9-213ENST00000433709 FMR1NBQ8N0W7 255 aaPredicted RBP9.43□□□□□ -0.9
HDAC9-213ENST00000433709 DCAF5Q96JK2 942 aa9.43□□□□□ -0.9
HDAC9-213ENST00000433709 SOX13Q9UN79 622 aa9.43□□□□□ -0.9
HDAC9-213ENST00000433709 COL19A1Q14993 1142 aa9.42□□□□□ -0.9
HDAC9-213ENST00000433709 EAPPQ56P03 285 aaPredicted RBP9.42□□□□□ -0.9
HDAC9-213ENST00000433709 BSNDQ8WZ55 320 aa9.42□□□□□ -0.9
HDAC9-213ENST00000433709 MUC3BQ9H195 1237 aa9.42□□□□□ -0.9
HDAC9-213ENST00000433709 ZNF608Q9ULD9 1512 aaPredicted RBP9.41□□□□□ -0.9
HDAC9-213ENST00000433709 A0A096LPE4 126 aa9.41□□□□□ -0.9
HDAC9-213ENST00000433709 A0A1W2PPZ6 126 aa9.41□□□□□ -0.9
HDAC9-213ENST00000433709 KRBA1A5PL33 1030 aa9.41□□□□□ -0.9
HDAC9-213ENST00000433709 FAM177BA6PVY3 158 aa9.41□□□□□ -0.9
HDAC9-213ENST00000433709 GDF11O95390 407 aa9.41□□□□□ -0.9
HDAC9-213ENST00000433709 ATP2B2Q01814 1243 aa9.41□□□□□ -0.9
HDAC9-213ENST00000433709 SETDB1Q15047 1291 aa9.41□□□□□ -0.9
HDAC9-213ENST00000433709 GRIK4Q16099 956 aa9.41□□□□□ -0.9
HDAC9-213ENST00000433709 ALG1LQ6GMV1 187 aa9.41□□□□□ -0.9
HDAC9-213ENST00000433709 VN1R5Q7Z5H4 357 aa9.41□□□□□ -0.9
HDAC9-213ENST00000433709 DTWD1Q8N5C7 304 aa9.41□□□□□ -0.9
HDAC9-213ENST00000433709 GLIS3Q8NEA6 775 aa9.41□□□□□ -0.9
HDAC9-213ENST00000433709 SPATA31C1P0DKV0 1188 aa9.4□□□□□ -0.9
HDAC9-213ENST00000433709 NXPE4Q6UWF7 544 aa9.4□□□□□ -0.9
HDAC9-213ENST00000433709 FBXO11Q86XK2 927 aa9.4□□□□□ -0.9
HDAC9-213ENST00000433709 TMEM151AQ8N4L1 468 aa9.4□□□□□ -0.9
HDAC9-213ENST00000433709 FBF1Q8TES7 1133 aa9.4□□□□□ -0.9
HDAC9-213ENST00000433709 BCO2Q9BYV7 579 aa9.4□□□□□ -0.9
HDAC9-213ENST00000433709 RNF19AQ9NV58 838 aa9.4□□□□□ -0.9
HDAC9-213ENST00000433709 TARBP1Q13395 1621 aaKnown RBP9.4□□□□□ -0.9
HDAC9-213ENST00000433709 EIF4G3O43432 1585 aaKnown RBP9.4□□□□□ -0.9
HDAC9-213ENST00000433709 ELNP15502 786 aa9.39□□□□□ -0.91
HDAC9-213ENST00000433709 CABP4P57796 275 aa9.39□□□□□ -0.91
HDAC9-213ENST00000433709 TAGLNQ01995 201 aaKnown RBP9.39□□□□□ -0.91
HDAC9-213ENST00000433709 HGSNATQ68CP4 663 aa9.39□□□□□ -0.91
HDAC9-213ENST00000433709 FBXO33Q7Z6M2 555 aa9.39□□□□□ -0.91
HDAC9-213ENST00000433709 GALNT11Q8NCW6 608 aa9.39□□□□□ -0.91
HDAC9-213ENST00000433709 CARD10Q9BWT7 1032 aa9.39□□□□□ -0.91
HDAC9-213ENST00000433709 ABCB6Q9NP58 842 aa9.39□□□□□ -0.91
HDAC9-213ENST00000433709 AQRO60306 1485 aaKnown RBP eCLIP9.39□□□□□ -0.91
HDAC9-213ENST00000433709 FGD5Q6ZNL6 1462 aa9.39□□□□□ -0.91
HDAC9-213ENST00000433709 TMEM238LA0A1B0GVL6 79 aa9.38□□□□□ -0.91
HDAC9-213ENST00000433709 H3BRJ5 948 aa9.38□□□□□ -0.91
HDAC9-213ENST00000433709 ERCC3P19447 782 aa9.38□□□□□ -0.91
HDAC9-213ENST00000433709 PRPF40BQ6NWY9 871 aaKnown RBP9.38□□□□□ -0.91
HDAC9-213ENST00000433709 SHISA2Q6UWI4 295 aa9.38□□□□□ -0.91
HDAC9-213ENST00000433709 ALYREFQ86V81 257 aaKnown RBP9.38□□□□□ -0.91
HDAC9-213ENST00000433709 OSBPL7Q9BZF2 842 aa9.38□□□□□ -0.91
HDAC9-213ENST00000433709 TRAK1Q9UPV9 953 aa9.38□□□□□ -0.91
HDAC9-213ENST00000433709 MAGI1Q96QZ7 1491 aaPredicted RBP9.37□□□□□ -0.91
HDAC9-213ENST00000433709 SOX1O00570 391 aaPredicted RBP9.37□□□□□ -0.91
HDAC9-213ENST00000433709 FSCN2O14926 492 aa9.37□□□□□ -0.91
HDAC9-213ENST00000433709 PRPF40AO75400 957 aaKnown RBP9.37□□□□□ -0.91
HDAC9-213ENST00000433709 IKBKEQ14164 716 aa9.37□□□□□ -0.91
HDAC9-213ENST00000433709 FAM117BQ6P1L5 589 aa9.37□□□□□ -0.91
HDAC9-213ENST00000433709 SLC7A3Q8WY07 619 aa9.37□□□□□ -0.91
HDAC9-213ENST00000433709 DUSP9Q99956 384 aaKnown RBP9.37□□□□□ -0.91
HDAC9-213ENST00000433709 TDRD9Q8NDG6 1382 aaKnown RBP9.37□□□□□ -0.91
HDAC9-213ENST00000433709 GRIN2BQ13224 1484 aa9.36□□□□□ -0.91
HDAC9-213ENST00000433709 DLL1O00548 723 aa9.36□□□□□ -0.91
HDAC9-213ENST00000433709 TM4SF5O14894 197 aa9.36□□□□□ -0.91
HDAC9-213ENST00000433709 FCGRTP55899 365 aa9.36□□□□□ -0.91
HDAC9-213ENST00000433709 WRNQ14191 1432 aaPredicted RBP eCLIP9.36□□□□□ -0.91
HDAC9-213ENST00000433709 RAD54L2Q9Y4B4 1467 aa9.35□□□□□ -0.91
HDAC9-213ENST00000433709 ESRRAP11474 423 aaPredicted RBP9.35□□□□□ -0.91
HDAC9-213ENST00000433709 SELPP16109 830 aa9.35□□□□□ -0.91
HDAC9-213ENST00000433709 ITPKAP23677 461 aa9.35□□□□□ -0.91
HDAC9-213ENST00000433709 ZNF423Q2M1K9 1284 aa9.35□□□□□ -0.91
HDAC9-213ENST00000433709 MAP4K3Q8IVH8 894 aa9.35□□□□□ -0.91
HDAC9-213ENST00000433709 KLHDC7BQ96G42 594 aa9.35□□□□□ -0.91
HDAC9-213ENST00000433709 ZNF576Q9H609 170 aa9.35□□□□□ -0.91
HDAC9-213ENST00000433709 SRA1Q9HD15 236 aaKnown RBP9.35□□□□□ -0.91
HDAC9-213ENST00000433709 SEC31BQ9NQW1 1179 aa9.35□□□□□ -0.91
HDAC9-213ENST00000433709 KCNK4Q9NYG8 393 aa9.35□□□□□ -0.91
HDAC9-213ENST00000433709 CUX1P39880 1505 aa9.35□□□□□ -0.91
HDAC9-213ENST00000433709 DDX3YO15523 660 aaKnown RBP9.34□□□□□ -0.91
HDAC9-213ENST00000433709 APBA3O96018 575 aa9.34□□□□□ -0.91
HDAC9-213ENST00000433709 ITGB2P05107 769 aa9.34□□□□□ -0.91
HDAC9-213ENST00000433709 CHRNA4P43681 627 aa9.34□□□□□ -0.91
HDAC9-213ENST00000433709 PIP4K2BP78356 416 aa9.34□□□□□ -0.91
HDAC9-213ENST00000433709 PCDH1Q08174 1060 aa9.34□□□□□ -0.91
HDAC9-213ENST00000433709 CD163Q86VB7 1156 aa9.34□□□□□ -0.91
HDAC9-213ENST00000433709 CLEC4MQ9H2X3 399 aaPredicted RBP9.34□□□□□ -0.91
HDAC9-213ENST00000433709 PPP4R2Q9NY27 417 aa9.34□□□□□ -0.91
HDAC9-213ENST00000433709 SPG7Q9UQ90 795 aa9.34□□□□□ -0.91
HDAC9-213ENST00000433709 C1QTNF9BB2RNN3 333 aa9.33□□□□□ -0.92
HDAC9-213ENST00000433709 CD68P34810 354 aaPredicted RBP9.33□□□□□ -0.92
HDAC9-213ENST00000433709 FOXD4L6Q3SYB3 417 aaPredicted RBP9.33□□□□□ -0.92
HDAC9-213ENST00000433709 FOXD4L3Q6VB84 417 aaPredicted RBP9.33□□□□□ -0.92
HDAC9-213ENST00000433709 DTHD1Q6ZMT9 781 aa9.33□□□□□ -0.92
HDAC9-213ENST00000433709 KLHL23Q8NBE8 558 aa9.33□□□□□ -0.92
HDAC9-213ENST00000433709 WNT8BQ93098 351 aa9.33□□□□□ -0.92
HDAC9-213ENST00000433709 BCL2L13Q9BXK5 485 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms