RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 PALLDQ8WX93 1383 aa19.68■□□□□ 0.74
SMARCA4-203ENST00000429416 CIZ1Q9ULV3 898 aaPredicted RBP19.68■□□□□ 0.74
SMARCA4-203ENST00000429416 IGSF1Q8N6C5 1336 aa19.68■□□□□ 0.74
SMARCA4-203ENST00000429416 PPEF1O14829 653 aaPredicted RBP19.67■□□□□ 0.74
SMARCA4-203ENST00000429416 NEBLO76041 1014 aa19.67■□□□□ 0.74
SMARCA4-203ENST00000429416 TNFAIP1Q13829 316 aa19.67■□□□□ 0.74
SMARCA4-203ENST00000429416 PARP1P09874 1014 aaKnown RBP19.67■□□□□ 0.74
SMARCA4-203ENST00000429416 RTL1A6NKG5 1358 aa19.67■□□□□ 0.74
SMARCA4-203ENST00000429416 KIF20AO95235 890 aa19.67■□□□□ 0.74
SMARCA4-203ENST00000429416 RBM25P49756 843 aaKnown RBP19.67■□□□□ 0.74
SMARCA4-203ENST00000429416 USP48Q86UV5 1035 aa19.67■□□□□ 0.74
SMARCA4-203ENST00000429416 ZBTB21Q9ULJ3 1066 aa19.67■□□□□ 0.74
SMARCA4-203ENST00000429416 PNMA6EA0A0J9YXQ4 647 aa19.67■□□□□ 0.74
SMARCA4-203ENST00000429416 EN1Q05925 392 aaPredicted RBP19.67■□□□□ 0.74
SMARCA4-203ENST00000429416 CCDC150Q8NCX0 1101 aa19.67■□□□□ 0.74
SMARCA4-203ENST00000429416 DRC1Q96MC2 740 aa19.67■□□□□ 0.74
SMARCA4-203ENST00000429416 TCP10L2B9ZVM9 353 aa19.66■□□□□ 0.74
SMARCA4-203ENST00000429416 TBCAO75347 108 aaKnown RBP19.66■□□□□ 0.74
SMARCA4-203ENST00000429416 ZAP70P43403 619 aa19.66■□□□□ 0.74
SMARCA4-203ENST00000429416 AMPD3Q01432 767 aa19.66■□□□□ 0.74
SMARCA4-203ENST00000429416 TCERG1LQ5VWI1 586 aa19.66■□□□□ 0.74
SMARCA4-203ENST00000429416 CPXCR1Q8N123 301 aa19.66■□□□□ 0.74
SMARCA4-203ENST00000429416 RTL9Q8NET4 1388 aa19.66■□□□□ 0.74
SMARCA4-203ENST00000429416 ATP7BP35670 1465 aa19.66■□□□□ 0.74
SMARCA4-203ENST00000429416 POTEJP0CG39 1038 aa19.66■□□□□ 0.74
SMARCA4-203ENST00000429416 ARHGAP31Q2M1Z3 1444 aa19.66■□□□□ 0.74
SMARCA4-203ENST00000429416 MYOM2P54296 1465 aa19.66■□□□□ 0.74
SMARCA4-203ENST00000429416 MAP3K11Q16584 847 aa19.66■□□□□ 0.74
SMARCA4-203ENST00000429416 PRAMEF22A3QJZ6 481 aa19.66■□□□□ 0.74
SMARCA4-203ENST00000429416 PCCAP05165 728 aaPredicted RBP19.66■□□□□ 0.74
SMARCA4-203ENST00000429416 FSIP1Q8NA03 581 aa19.65■□□□□ 0.74
SMARCA4-203ENST00000429416 PKD2L1Q9P0L9 805 aa19.65■□□□□ 0.74
SMARCA4-203ENST00000429416 ERBB4Q15303 1308 aa19.65■□□□□ 0.74
SMARCA4-203ENST00000429416 IRX3P78415 501 aaPredicted RBP19.65■□□□□ 0.74
SMARCA4-203ENST00000429416 PSDA5PKW4 1024 aaPredicted RBP19.65■□□□□ 0.74
SMARCA4-203ENST00000429416 PROSER3Q2NL68 480 aa19.65■□□□□ 0.74
SMARCA4-203ENST00000429416 BACH1O14867 736 aa19.65■□□□□ 0.74
SMARCA4-203ENST00000429416 GIGYF2Q6Y7W6 1299 aaKnown RBP19.65■□□□□ 0.74
SMARCA4-203ENST00000429416 AATKQ6ZMQ8 1374 aa19.65■□□□□ 0.74
SMARCA4-203ENST00000429416 KIF1BO60333 1816 aa19.64■□□□□ 0.74
SMARCA4-203ENST00000429416 B4E1Z4 1266 aa19.64■□□□□ 0.74
SMARCA4-203ENST00000429416 STX6O43752 255 aa19.64■□□□□ 0.74
SMARCA4-203ENST00000429416 ENOX2Q16206 610 aaKnown RBP19.64■□□□□ 0.74
SMARCA4-203ENST00000429416 DALRD3Q5D0E6 543 aaKnown RBP19.64■□□□□ 0.74
SMARCA4-203ENST00000429416 FCHSD1Q86WN1 690 aa19.64■□□□□ 0.74
SMARCA4-203ENST00000429416 GPAA1O43292 621 aa19.64■□□□□ 0.73
SMARCA4-203ENST00000429416 CBFA2T2O43439 604 aa19.64■□□□□ 0.73
SMARCA4-203ENST00000429416 CFAP100Q494V2 611 aa19.64■□□□□ 0.73
SMARCA4-203ENST00000429416 STXBP4Q6ZWJ1 553 aa19.64■□□□□ 0.73
SMARCA4-203ENST00000429416 AXIN2Q9Y2T1 843 aa19.64■□□□□ 0.73
SMARCA4-203ENST00000429416 GREM2Q9H772 168 aa19.64■□□□□ 0.73
SMARCA4-203ENST00000429416 NOD1Q9Y239 953 aa19.64■□□□□ 0.73
SMARCA4-203ENST00000429416 KDM5AP29375 1690 aaKnown RBP19.64■□□□□ 0.73
SMARCA4-203ENST00000429416 CHRNDQ07001 517 aa19.64■□□□□ 0.73
SMARCA4-203ENST00000429416 APOBRQ0VD83 1088 aa19.64■□□□□ 0.73
SMARCA4-203ENST00000429416 ERFEQ4G0M1 354 aa19.64■□□□□ 0.73
SMARCA4-203ENST00000429416 APPBP2Q92624 585 aa19.64■□□□□ 0.73
SMARCA4-203ENST00000429416 HELLSQ9NRZ9 838 aa19.64■□□□□ 0.73
SMARCA4-203ENST00000429416 GDPD2Q9HCC8 539 aa19.63■□□□□ 0.73
SMARCA4-203ENST00000429416 CLASP1Q7Z460 1538 aa19.63■□□□□ 0.73
SMARCA4-203ENST00000429416 SMTNL1A8MU46 457 aa19.63■□□□□ 0.73
SMARCA4-203ENST00000429416 BCAMP50895 628 aa19.63■□□□□ 0.73
SMARCA4-203ENST00000429416 CCDC181Q5TID7 509 aa19.63■□□□□ 0.73
SMARCA4-203ENST00000429416 TCHPQ9BT92 498 aa19.63■□□□□ 0.73
SMARCA4-203ENST00000429416 CREB3L3Q68CJ9 461 aa19.63■□□□□ 0.73
SMARCA4-203ENST00000429416 DBNDD1Q9H9R9 158 aa19.62■□□□□ 0.73
SMARCA4-203ENST00000429416 CERS3Q8IU89 383 aa19.62■□□□□ 0.73
SMARCA4-203ENST00000429416 HOMER2Q9NSB8 354 aa19.62■□□□□ 0.73
SMARCA4-203ENST00000429416 FILIP1Q7Z7B0 1213 aa19.62■□□□□ 0.73
SMARCA4-203ENST00000429416 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.62■□□□□ 0.733e-6■■■■■ 29.3
SMARCA4-203ENST00000429416 RBM27Q9P2N5 1060 aaKnown RBP19.62■□□□□ 0.73
SMARCA4-203ENST00000429416 ZNF532Q9HCE3 1301 aa19.62■□□□□ 0.73
SMARCA4-203ENST00000429416 SLC1A4P43007 532 aa19.61■□□□□ 0.73
SMARCA4-203ENST00000429416 FKBP15Q5T1M5 1219 aa19.61■□□□□ 0.73
SMARCA4-203ENST00000429416 PLEKHM2Q8IWE5 1019 aa19.61■□□□□ 0.73
SMARCA4-203ENST00000429416 MRE11P49959 708 aa19.61■□□□□ 0.73
SMARCA4-203ENST00000429416 GPS2Q13227 327 aa19.61■□□□□ 0.73
SMARCA4-203ENST00000429416 BIN1O00499 593 aa19.6■□□□□ 0.73
SMARCA4-203ENST00000429416 CACNA2D4Q7Z3S7 1137 aa19.6■□□□□ 0.73
SMARCA4-203ENST00000429416 RUFY1Q96T51 708 aa19.6■□□□□ 0.73
SMARCA4-203ENST00000429416 ZNF804BA4D1E1 1349 aa19.6■□□□□ 0.73
SMARCA4-203ENST00000429416 OTUD7AQ8TE49 926 aaPredicted RBP19.6■□□□□ 0.73
SMARCA4-203ENST00000429416 GPHNQ9NQX3 736 aaPredicted RBP19.6■□□□□ 0.73
SMARCA4-203ENST00000429416 CALML3P27482 149 aa19.6■□□□□ 0.73
SMARCA4-203ENST00000429416 GNA11P29992 359 aa19.6■□□□□ 0.73
SMARCA4-203ENST00000429416 PTPDC1A2A3K4 754 aa19.6■□□□□ 0.73
SMARCA4-203ENST00000429416 RAD17O75943 681 aa19.6■□□□□ 0.73
SMARCA4-203ENST00000429416 USP8P40818 1118 aa19.6■□□□□ 0.73
SMARCA4-203ENST00000429416 NSMFQ6X4W1 530 aa19.6■□□□□ 0.73
SMARCA4-203ENST00000429416 FGFR1OPO95684 399 aaKnown RBP19.59■□□□□ 0.73
SMARCA4-203ENST00000429416 MAP3K9P80192 1104 aa19.59■□□□□ 0.73
SMARCA4-203ENST00000429416 CETN1Q12798 172 aa19.59■□□□□ 0.73
SMARCA4-203ENST00000429416 CCDC40Q4G0X9 1142 aa19.59■□□□□ 0.73
SMARCA4-203ENST00000429416 DHX32Q7L7V1 743 aaKnown RBP19.59■□□□□ 0.73
SMARCA4-203ENST00000429416 FAM177A1Q8N128 213 aaPredicted RBP19.59■□□□□ 0.73
SMARCA4-203ENST00000429416 PAGR1Q9BTK6 254 aa19.59■□□□□ 0.73
SMARCA4-203ENST00000429416 TNS3Q68CZ2 1445 aa19.59■□□□□ 0.73
SMARCA4-203ENST00000429416 CYP27B1O15528 508 aa19.59■□□□□ 0.73
SMARCA4-203ENST00000429416 KDRP35968 1356 aa19.59■□□□□ 0.73
SMARCA4-203ENST00000429416 LRRC24Q50LG9 513 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms