RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 THRAP3Q9Y2W1 955 aaKnown RBP15.94■□□□□ 0.14
RPL28-202ENST00000426763 ABCC4O15439 1325 aa15.94■□□□□ 0.14
RPL28-202ENST00000426763 PCCAP05165 728 aaPredicted RBP15.93■□□□□ 0.14
RPL28-202ENST00000426763 CCDC181Q5TID7 509 aa15.93■□□□□ 0.14
RPL28-202ENST00000426763 TBC1D22AQ8WUA7 517 aa15.93■□□□□ 0.14
RPL28-202ENST00000426763 ARMT1Q9H993 441 aa15.93■□□□□ 0.14
RPL28-202ENST00000426763 RBM28Q9NW13 759 aaKnown RBP15.93■□□□□ 0.14
RPL28-202ENST00000426763 ASAP1Q9ULH1 1129 aa15.93■□□□□ 0.14
RPL28-202ENST00000426763 CDC42BPGQ6DT37 1551 aa15.93■□□□□ 0.14
RPL28-202ENST00000426763 CRKLP46109 303 aaKnown RBP15.93■□□□□ 0.14
RPL28-202ENST00000426763 APOBRQ0VD83 1088 aa15.93■□□□□ 0.14
RPL28-202ENST00000426763 SPATA5Q8NB90 893 aa15.93■□□□□ 0.14
RPL28-202ENST00000426763 PANK2Q9BZ23 570 aa15.93■□□□□ 0.14
RPL28-202ENST00000426763 C8orf34Q49A92 452 aa15.93■□□□□ 0.14
RPL28-202ENST00000426763 KBTBD3Q8NAB2 608 aa15.93■□□□□ 0.14
RPL28-202ENST00000426763 ADGRL3Q9HAR2 1447 aa15.93■□□□□ 0.14
RPL28-202ENST00000426763 AK2P54819 239 aa15.93■□□□□ 0.14
RPL28-202ENST00000426763 CDK12Q9NYV4 1490 aaPredicted RBP15.92■□□□□ 0.14
RPL28-202ENST00000426763 SPDYE3A6NKU9 549 aa15.92■□□□□ 0.14
RPL28-202ENST00000426763 TRMT1LQ7Z2T5 733 aaKnown RBP15.92■□□□□ 0.14
RPL28-202ENST00000426763 NIM1KQ8IY84 436 aa15.92■□□□□ 0.14
RPL28-202ENST00000426763 NLGN1Q8N2Q7 840 aa15.92■□□□□ 0.14
RPL28-202ENST00000426763 CCDC150Q8NCX0 1101 aa15.92■□□□□ 0.14
RPL28-202ENST00000426763 IL6STP40189 918 aaPredicted RBP15.92■□□□□ 0.14
RPL28-202ENST00000426763 CACNA2D4Q7Z3S7 1137 aa15.92■□□□□ 0.14
RPL28-202ENST00000426763 KRT27Q7Z3Y8 459 aa15.92■□□□□ 0.14
RPL28-202ENST00000426763 SPHKAPQ2M3C7 1700 aa15.92■□□□□ 0.14
RPL28-202ENST00000426763 TBCAO75347 108 aaKnown RBP15.92■□□□□ 0.14
RPL28-202ENST00000426763 LIG1P18858 919 aa15.92■□□□□ 0.14
RPL28-202ENST00000426763 TEX35Q5T0J7 233 aa15.92■□□□□ 0.14
RPL28-202ENST00000426763 MSL1Q68DK7 614 aa15.92■□□□□ 0.14
RPL28-202ENST00000426763 KIAA1328Q86T90 577 aa15.92■□□□□ 0.14
RPL28-202ENST00000426763 STX1AQ16623 288 aa15.91■□□□□ 0.14
RPL28-202ENST00000426763 OTUD7AQ8TE49 926 aaPredicted RBP15.91■□□□□ 0.14
RPL28-202ENST00000426763 GPAA1O43292 621 aa15.91■□□□□ 0.14
RPL28-202ENST00000426763 PARP1P09874 1014 aaKnown RBP15.91■□□□□ 0.14
RPL28-202ENST00000426763 GNA11P29992 359 aa15.91■□□□□ 0.14
RPL28-202ENST00000426763 GRM1Q13255 1194 aa15.91■□□□□ 0.14
RPL28-202ENST00000426763 PLS1Q14651 629 aa15.91■□□□□ 0.14
RPL28-202ENST00000426763 CDC42BPBQ9Y5S2 1711 aa15.91■□□□□ 0.14
RPL28-202ENST00000426763 ALKQ9UM73 1620 aa15.91■□□□□ 0.14
RPL28-202ENST00000426763 CETN1Q12798 172 aa15.91■□□□□ 0.14
RPL28-202ENST00000426763 USP44Q9H0E7 712 aa15.91■□□□□ 0.14
RPL28-202ENST00000426763 BEND3Q5T5X7 828 aa15.91■□□□□ 0.14
RPL28-202ENST00000426763 USPL1Q5W0Q7 1092 aa15.91■□□□□ 0.14
RPL28-202ENST00000426763 HOOK2Q96ED9 719 aa15.91■□□□□ 0.14
RPL28-202ENST00000426763 CCDC129Q6ZRS4 1044 aa15.91■□□□□ 0.14
RPL28-202ENST00000426763 USP26Q9BXU7 913 aa15.91■□□□□ 0.14
RPL28-202ENST00000426763 RIMBP3CA6NJZ7 1639 aa15.9■□□□□ 0.14
RPL28-202ENST00000426763 RIMBP3BA6NNM3 1639 aa15.9■□□□□ 0.14
RPL28-202ENST00000426763 RIMBP3Q9UFD9 1639 aa15.9■□□□□ 0.14
RPL28-202ENST00000426763 TRIM37O94972 964 aa15.9■□□□□ 0.14
RPL28-202ENST00000426763 SYKP43405 635 aa15.9■□□□□ 0.14
RPL28-202ENST00000426763 VPS36Q86VN1 386 aa15.9■□□□□ 0.14
RPL28-202ENST00000426763 RMND1Q9NWS8 449 aa15.9■□□□□ 0.14
RPL28-202ENST00000426763 SFPQP23246 707 aaKnown RBP eCLIP15.9■□□□□ 0.14
RPL28-202ENST00000426763 KRT2P35908 639 aa15.9■□□□□ 0.14
RPL28-202ENST00000426763 TMEM87BQ96K49 555 aa15.9■□□□□ 0.14
RPL28-202ENST00000426763 TRIM75PA6NK02 468 aa15.9■□□□□ 0.14
RPL28-202ENST00000426763 ERLIN2O94905 339 aa15.9■□□□□ 0.14
RPL28-202ENST00000426763 FAM114A1Q8IWE2 563 aa15.9■□□□□ 0.14
RPL28-202ENST00000426763 SYCP3Q8IZU3 236 aa15.9■□□□□ 0.14
RPL28-202ENST00000426763 PPIP5K2O43314 1243 aa15.89■□□□□ 0.13
RPL28-202ENST00000426763 MTIF2P46199 727 aaKnown RBP15.89■□□□□ 0.13
RPL28-202ENST00000426763 RAB3GAP1Q15042 981 aa15.89■□□□□ 0.13
RPL28-202ENST00000426763 PICK1Q9NRD5 415 aa15.89■□□□□ 0.13
RPL28-202ENST00000426763 AATFQ9NY61 560 aaKnown RBP eCLIP15.89■□□□□ 0.13
RPL28-202ENST00000426763 BIN1O00499 593 aa15.89■□□□□ 0.13
RPL28-202ENST00000426763 TOP1P11387 765 aaKnown RBP15.89■□□□□ 0.13
RPL28-202ENST00000426763 CCDC40Q4G0X9 1142 aa15.89■□□□□ 0.13
RPL28-202ENST00000426763 ARHGAP29Q52LW3 1261 aa15.89■□□□□ 0.13
RPL28-202ENST00000426763 ZAP70P43403 619 aa15.89■□□□□ 0.13
RPL28-202ENST00000426763 SPA17Q15506 151 aa15.89■□□□□ 0.13
RPL28-202ENST00000426763 FAM177A1Q8N128 213 aaPredicted RBP15.89■□□□□ 0.13
RPL28-202ENST00000426763 EXOC1Q9NV70 894 aa15.89■□□□□ 0.13
RPL28-202ENST00000426763 PTPDC1A2A3K4 754 aa15.89■□□□□ 0.13
RPL28-202ENST00000426763 ARHGEF10LQ9HCE6 1279 aa15.89■□□□□ 0.13
RPL28-202ENST00000426763 ATP2B4P23634 1241 aa15.88■□□□□ 0.13
RPL28-202ENST00000426763 STAT6P42226 847 aa15.88■□□□□ 0.13
RPL28-202ENST00000426763 C2CD5Q86YS7 1000 aa15.88■□□□□ 0.13
RPL28-202ENST00000426763 SSH3Q8TE77 659 aa15.88■□□□□ 0.13
RPL28-202ENST00000426763 ZKSCAN3Q9BRR0 538 aa15.88■□□□□ 0.13
RPL28-202ENST00000426763 CROCC2H7BZ55 1655 aa15.88■□□□□ 0.13
RPL28-202ENST00000426763 ATP5JP18859 108 aa15.88■□□□□ 0.13
RPL28-202ENST00000426763 B4E1Z4 1266 aa15.88■□□□□ 0.13
RPL28-202ENST00000426763 F13A1P00488 732 aa15.88■□□□□ 0.13
RPL28-202ENST00000426763 GLI2P10070 1586 aa15.88■□□□□ 0.13
RPL28-202ENST00000426763 TAF4BQ92750 862 aa15.88■□□□□ 0.13
RPL28-202ENST00000426763 ZBTB1Q9Y2K1 713 aa15.88■□□□□ 0.13
RPL28-202ENST00000426763 CAVIN2O95810 425 aa15.87■□□□□ 0.13
RPL28-202ENST00000426763 GIGYF2Q6Y7W6 1299 aaKnown RBP15.87■□□□□ 0.13
RPL28-202ENST00000426763 SLC27A2O14975 620 aa15.87■□□□□ 0.13
RPL28-202ENST00000426763 CNKSR1Q969H4 720 aa15.87■□□□□ 0.13
RPL28-202ENST00000426763 PRKCSHP14314 528 aaPredicted RBP15.87■□□□□ 0.13
RPL28-202ENST00000426763 RPS6KB1P23443 525 aa15.87■□□□□ 0.13
RPL28-202ENST00000426763 HSP90AA2PQ14568 343 aaPredicted RBP15.87■□□□□ 0.13
RPL28-202ENST00000426763 MRPS27Q92552 414 aaKnown RBP15.87■□□□□ 0.13
RPL28-202ENST00000426763 FBXO3Q9UK99 471 aa15.87■□□□□ 0.13
RPL28-202ENST00000426763 ZNF532Q9HCE3 1301 aa15.87■□□□□ 0.13
RPL28-202ENST00000426763 TCERG1LQ5VWI1 586 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms