RNA–Protein interactions for RNA: ENST00000423048.5

ALMS1-201, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 1 (best)

Gene ALMS1, Length 5,194 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-201ENST00000423048 TNNT1P13805 278 aa8.11□□□□□ -1.11
ALMS1-201ENST00000423048 CFAP58Q5T655 872 aa8.11□□□□□ -1.11
ALMS1-201ENST00000423048 ZNF804AQ7Z570 1209 aa8.11□□□□□ -1.11
ALMS1-201ENST00000423048 CSRNP2Q9H175 543 aa8.11□□□□□ -1.11
ALMS1-201ENST00000423048 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.11□□□□□ -1.11
ALMS1-201ENST00000423048 USP16Q9Y5T5 823 aa8.11□□□□□ -1.11
ALMS1-201ENST00000423048 TRIM75PA6NK02 468 aa8.11□□□□□ -1.11
ALMS1-201ENST00000423048 DEXIO95424 95 aa8.11□□□□□ -1.11
ALMS1-201ENST00000423048 GOLGA1Q92805 767 aa8.11□□□□□ -1.11
ALMS1-201ENST00000423048 PTPRUQ92729 1446 aa8.11□□□□□ -1.11
ALMS1-201ENST00000423048 H0YCG3 227 aa8.11□□□□□ -1.11
ALMS1-201ENST00000423048 RNMTO43148 476 aaKnown RBP8.11□□□□□ -1.11
ALMS1-201ENST00000423048 ATP5JP18859 108 aa8.11□□□□□ -1.11
ALMS1-201ENST00000423048 SLC4A3P48751 1232 aa8.11□□□□□ -1.11
ALMS1-201ENST00000423048 ST5P78524 1137 aa8.11□□□□□ -1.11
ALMS1-201ENST00000423048 RTN1Q16799 776 aa8.11□□□□□ -1.11
ALMS1-201ENST00000423048 WDR78Q5VTH9 848 aa8.11□□□□□ -1.11
ALMS1-201ENST00000423048 DZIP1Q86YF9 867 aaKnown RBP8.11□□□□□ -1.11
ALMS1-201ENST00000423048 KCTD17Q8N5Z5 321 aa8.11□□□□□ -1.11
ALMS1-201ENST00000423048 IQUBQ8NA54 791 aa8.11□□□□□ -1.11
ALMS1-201ENST00000423048 A0A1W2PQ27 194 aa8.11□□□□□ -1.11
ALMS1-201ENST00000423048 A0A1W2PQ64 194 aa8.11□□□□□ -1.11
ALMS1-201ENST00000423048 A0A1W2PQD8 194 aa8.11□□□□□ -1.11
ALMS1-201ENST00000423048 TMEM67Q5HYA8 995 aa8.11□□□□□ -1.11
ALMS1-201ENST00000423048 CEP135Q66GS9 1140 aa8.11□□□□□ -1.11
ALMS1-201ENST00000423048 SSH3Q8TE77 659 aa8.11□□□□□ -1.11
ALMS1-201ENST00000423048 IWS1Q96ST2 819 aa8.11□□□□□ -1.11
ALMS1-201ENST00000423048 CLSTN2Q9H4D0 955 aa8.11□□□□□ -1.11
ALMS1-201ENST00000423048 OGFRQ9NZT2 677 aa8.11□□□□□ -1.11
ALMS1-201ENST00000423048 NRXN1Q9ULB1 1477 aa8.1□□□□□ -1.11
ALMS1-201ENST00000423048 SYCE3A1L190 88 aa8.1□□□□□ -1.11
ALMS1-201ENST00000423048 ZNF500O60304 480 aaPredicted RBP8.1□□□□□ -1.11
ALMS1-201ENST00000423048 ATP2B3Q16720 1220 aa8.1□□□□□ -1.11
ALMS1-201ENST00000423048 RBM8AQ9Y5S9 174 aaKnown RBP8.1□□□□□ -1.11
ALMS1-201ENST00000423048 KDM4AO75164 1064 aa8.1□□□□□ -1.11
ALMS1-201ENST00000423048 HSPA4P34932 840 aa8.1□□□□□ -1.11
ALMS1-201ENST00000423048 CCDC184Q52MB2 194 aa8.1□□□□□ -1.11
ALMS1-201ENST00000423048 CACNA2D4Q7Z3S7 1137 aa8.1□□□□□ -1.11
ALMS1-201ENST00000423048 SUPT20HQ8NEM7 779 aa8.1□□□□□ -1.11
ALMS1-201ENST00000423048 TBC1D22AQ8WUA7 517 aa8.1□□□□□ -1.11
ALMS1-201ENST00000423048 CABP5Q9NP86 173 aa8.1□□□□□ -1.11
ALMS1-201ENST00000423048 EMILIN1Q9Y6C2 1016 aa8.1□□□□□ -1.11
ALMS1-201ENST00000423048 CTAGE15A4D2H0 777 aa8.1□□□□□ -1.11
ALMS1-201ENST00000423048 GIGYF1O75420 1035 aaPredicted RBP8.1□□□□□ -1.11
ALMS1-201ENST00000423048 STAMBPO95630 424 aa8.1□□□□□ -1.11
ALMS1-201ENST00000423048 CTAGE8P0CG41 777 aa8.1□□□□□ -1.11
ALMS1-201ENST00000423048 ARID4AP29374 1257 aaPredicted RBP8.1□□□□□ -1.11
ALMS1-201ENST00000423048 HOXC9P31274 260 aa8.1□□□□□ -1.11
ALMS1-201ENST00000423048 UBA7P41226 1012 aa8.1□□□□□ -1.11
ALMS1-201ENST00000423048 AXDND1Q5T1B0 1012 aaPredicted RBP8.1□□□□□ -1.11
ALMS1-201ENST00000423048 CTAGE6Q86UF2 777 aa8.1□□□□□ -1.11
ALMS1-201ENST00000423048 CTAGE4Q8IX94 777 aa8.1□□□□□ -1.11
ALMS1-201ENST00000423048 TMEM87AQ8NBN3 555 aa8.1□□□□□ -1.11
ALMS1-201ENST00000423048 GABPB2Q8TAK5 448 aaPredicted RBP8.1□□□□□ -1.11
ALMS1-201ENST00000423048 APPBP2Q92624 585 aa8.1□□□□□ -1.11
ALMS1-201ENST00000423048 MKNK2Q9HBH9 465 aa8.1□□□□□ -1.11
ALMS1-201ENST00000423048 ARFGAP3Q9NP61 516 aa8.1□□□□□ -1.11
ALMS1-201ENST00000423048 SGSM2O43147 1006 aa8.1□□□□□ -1.11
ALMS1-201ENST00000423048 ADCY5O95622 1261 aa8.1□□□□□ -1.11
ALMS1-201ENST00000423048 IL2RBP14784 551 aa8.1□□□□□ -1.11
ALMS1-201ENST00000423048 RPS6KB1P23443 525 aa8.1□□□□□ -1.11
ALMS1-201ENST00000423048 NLRP5P59047 1200 aa8.1□□□□□ -1.11
ALMS1-201ENST00000423048 DDX46Q7L014 1031 aaKnown RBP8.1□□□□□ -1.11
ALMS1-201ENST00000423048 RBM42Q9BTD8 480 aaKnown RBP8.1□□□□□ -1.11
ALMS1-201ENST00000423048 EXOC1Q9NV70 894 aa8.1□□□□□ -1.11
ALMS1-201ENST00000423048 RNF14Q9UBS8 474 aa8.1□□□□□ -1.11
ALMS1-201ENST00000423048 LRRC7Q96NW7 1537 aa8.1□□□□□ -1.11
ALMS1-201ENST00000423048 CHD1O14646 1710 aa8.09□□□□□ -1.11
ALMS1-201ENST00000423048 ANKRD62A6NC57 917 aa8.09□□□□□ -1.11
ALMS1-201ENST00000423048 SPTLC2O15270 562 aa8.09□□□□□ -1.11
ALMS1-201ENST00000423048 RBM6P78332 1123 aaKnown RBP8.09□□□□□ -1.11
ALMS1-201ENST00000423048 SEPT2Q15019 361 aa8.09□□□□□ -1.11
ALMS1-201ENST00000423048 RRS1Q15050 365 aaKnown RBP8.09□□□□□ -1.11
ALMS1-201ENST00000423048 FLAD1Q8NFF5 587 aa8.09□□□□□ -1.11
ALMS1-201ENST00000423048 PAG1Q9NWQ8 432 aa8.09□□□□□ -1.11
ALMS1-201ENST00000423048 SOS2Q07890 1332 aaPredicted RBP8.09□□□□□ -1.11
ALMS1-201ENST00000423048 TULP4Q9NRJ4 1543 aa8.09□□□□□ -1.11
ALMS1-201ENST00000423048 KRT2P35908 639 aa8.09□□□□□ -1.11
ALMS1-201ENST00000423048 KIF4BQ2VIQ3 1234 aa8.09□□□□□ -1.11
ALMS1-201ENST00000423048 FOXD4L5Q5VV16 416 aaPredicted RBP8.09□□□□□ -1.11
ALMS1-201ENST00000423048 TMTC1Q8IUR5 882 aa8.09□□□□□ -1.11
ALMS1-201ENST00000423048 GOLGA5Q8TBA6 731 aa8.09□□□□□ -1.11
ALMS1-201ENST00000423048 KIAA1524Q8TCG1 905 aa8.09□□□□□ -1.11
ALMS1-201ENST00000423048 FOXD4L4Q8WXT5 416 aaPredicted RBP8.09□□□□□ -1.11
ALMS1-201ENST00000423048 EXOC6BQ9Y2D4 811 aa8.09□□□□□ -1.11
ALMS1-201ENST00000423048 TNNC1P63316 161 aa8.09□□□□□ -1.11
ALMS1-201ENST00000423048 MYL5Q02045 173 aa8.09□□□□□ -1.11
ALMS1-201ENST00000423048 TTC6Q86TZ1 520 aa8.09□□□□□ -1.11
ALMS1-201ENST00000423048 KRI1Q8N9T8 703 aaKnown RBP8.09□□□□□ -1.11
ALMS1-201ENST00000423048 UTP14AQ9BVJ6 771 aaKnown RBP8.09□□□□□ -1.11
ALMS1-201ENST00000423048 FKBP4Q02790 459 aaKnown RBP eCLIP8.09□□□□□ -1.11
ALMS1-201ENST00000423048 MTMR3Q13615 1198 aa8.09□□□□□ -1.11
ALMS1-201ENST00000423048 C6orf163Q5TEZ5 329 aa8.09□□□□□ -1.11
ALMS1-201ENST00000423048 KRT25Q7Z3Z0 450 aa8.09□□□□□ -1.11
ALMS1-201ENST00000423048 A0A1B0GVL5 298 aa8.08□□□□□ -1.12
ALMS1-201ENST00000423048 ATP2A1O14983 1001 aa8.08□□□□□ -1.12
ALMS1-201ENST00000423048 HSF2BPO75031 334 aa8.08□□□□□ -1.12
ALMS1-201ENST00000423048 POLR3DP05423 398 aaPredicted RBP8.08□□□□□ -1.12
ALMS1-201ENST00000423048 CNGA1P29973 690 aa8.08□□□□□ -1.12
ALMS1-201ENST00000423048 NOLC1Q14978 699 aaKnown RBP eCLIP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms