RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 COL23A1Q86Y22 540 aaPredicted RBP12.73□□□□□ -0.37
SMPD4P1-201ENST00000416717 MAGEB6Q8N7X4 407 aa12.73□□□□□ -0.37
SMPD4P1-201ENST00000416717 ABCF2Q9UG63 623 aa12.73□□□□□ -0.37
SMPD4P1-201ENST00000416717 DOCK2Q92608 1830 aa12.73□□□□□ -0.37
SMPD4P1-201ENST00000416717 RPS6KB1P23443 525 aa12.73□□□□□ -0.37
SMPD4P1-201ENST00000416717 CAVIN4Q5BKX8 364 aa12.73□□□□□ -0.37
SMPD4P1-201ENST00000416717 STOX1Q6ZVD7 989 aa12.73□□□□□ -0.37
SMPD4P1-201ENST00000416717 RPGRQ92834 1020 aaKnown RBP12.73□□□□□ -0.37
SMPD4P1-201ENST00000416717 NEK1Q96PY6 1258 aa12.73□□□□□ -0.37
SMPD4P1-201ENST00000416717 LRRC2Q9BYS8 371 aa12.73□□□□□ -0.37
SMPD4P1-201ENST00000416717 FOXP2O15409 715 aa12.72□□□□□ -0.37
SMPD4P1-201ENST00000416717 FAM84BQ96KN1 310 aaPredicted RBP12.72□□□□□ -0.37
SMPD4P1-201ENST00000416717 CWC22Q9HCG8 908 aaKnown RBP12.72□□□□□ -0.37
SMPD4P1-201ENST00000416717 ANKIB1Q9P2G1 1089 aa12.72□□□□□ -0.37
SMPD4P1-201ENST00000416717 LRP2BPQ9P2M1 347 aa12.72□□□□□ -0.37
SMPD4P1-201ENST00000416717 TNS1Q9HBL0 1735 aaKnown RBP12.72□□□□□ -0.37
SMPD4P1-201ENST00000416717 POLRMTO00411 1230 aaKnown RBP12.72□□□□□ -0.37
SMPD4P1-201ENST00000416717 APPP05067 770 aa12.72□□□□□ -0.37
SMPD4P1-201ENST00000416717 MCM4P33991 863 aa12.72□□□□□ -0.37
SMPD4P1-201ENST00000416717 MAP3K12Q12852 859 aa12.72□□□□□ -0.37
SMPD4P1-201ENST00000416717 MSL1Q68DK7 614 aa12.72□□□□□ -0.37
SMPD4P1-201ENST00000416717 TICAM2Q86XR7 235 aa12.72□□□□□ -0.37
SMPD4P1-201ENST00000416717 CCDC83Q8IWF9 413 aa12.72□□□□□ -0.37
SMPD4P1-201ENST00000416717 NECAB1Q8N987 351 aa12.72□□□□□ -0.37
SMPD4P1-201ENST00000416717 JAG2Q9Y219 1238 aa12.72□□□□□ -0.37
SMPD4P1-201ENST00000416717 FGAP02671 866 aa12.71□□□□□ -0.37
SMPD4P1-201ENST00000416717 GRAPQ13588 217 aa12.71□□□□□ -0.37
SMPD4P1-201ENST00000416717 KRT32Q14532 448 aa12.71□□□□□ -0.37
SMPD4P1-201ENST00000416717 TSGA10IPQ3SY00 556 aa12.71□□□□□ -0.37
SMPD4P1-201ENST00000416717 TXNRD3Q86VQ6 643 aa12.71□□□□□ -0.37
SMPD4P1-201ENST00000416717 GRAPLQ8TC17 118 aaPredicted RBP12.71□□□□□ -0.37
SMPD4P1-201ENST00000416717 AKT1S1Q96B36 256 aa12.71□□□□□ -0.37
SMPD4P1-201ENST00000416717 GPR101Q96P66 508 aaPredicted RBP12.71□□□□□ -0.37
SMPD4P1-201ENST00000416717 GNL3LQ9NVN8 582 aaKnown RBP12.71□□□□□ -0.37
SMPD4P1-201ENST00000416717 TPCN1Q9ULQ1 816 aa12.71□□□□□ -0.37
SMPD4P1-201ENST00000416717 ZNF804BA4D1E1 1349 aa12.71□□□□□ -0.38
SMPD4P1-201ENST00000416717 TCRBV5S4A2TA0A5A2 114 aa12.71□□□□□ -0.38
SMPD4P1-201ENST00000416717 UBE3CQ15386 1083 aa12.71□□□□□ -0.38
SMPD4P1-201ENST00000416717 CHST3Q7LGC8 479 aa12.71□□□□□ -0.38
SMPD4P1-201ENST00000416717 AIDAQ96BJ3 306 aa12.71□□□□□ -0.38
SMPD4P1-201ENST00000416717 ANKRD2Q9GZV1 360 aa12.71□□□□□ -0.38
SMPD4P1-201ENST00000416717 COL1A1P02452 1464 aaPredicted RBP12.7□□□□□ -0.38
SMPD4P1-201ENST00000416717 E7EWF7 191 aa12.7□□□□□ -0.38
SMPD4P1-201ENST00000416717 STK3Q13188 491 aa12.7□□□□□ -0.38
SMPD4P1-201ENST00000416717 ME3Q16798 604 aa12.7□□□□□ -0.38
SMPD4P1-201ENST00000416717 MIGA1Q8NAN2 632 aa12.7□□□□□ -0.38
SMPD4P1-201ENST00000416717 RAI14Q9P0K7 980 aa12.7□□□□□ -0.38
SMPD4P1-201ENST00000416717 MBD4O95243 580 aa12.69□□□□□ -0.38
SMPD4P1-201ENST00000416717 NUCB2P80303 420 aa12.69□□□□□ -0.38
SMPD4P1-201ENST00000416717 FGD1P98174 961 aa12.69□□□□□ -0.38
SMPD4P1-201ENST00000416717 EN1Q05925 392 aaPredicted RBP12.69□□□□□ -0.38
SMPD4P1-201ENST00000416717 CHAF1AQ13111 956 aaPredicted RBP12.69□□□□□ -0.38
SMPD4P1-201ENST00000416717 TOB2Q14106 344 aaPredicted RBP12.69□□□□□ -0.38
SMPD4P1-201ENST00000416717 INTS4Q96HW7 963 aaKnown RBP12.69□□□□□ -0.38
SMPD4P1-201ENST00000416717 CHAMP1Q96JM3 812 aa12.69□□□□□ -0.38
SMPD4P1-201ENST00000416717 ARMT1Q9H993 441 aa12.69□□□□□ -0.38
SMPD4P1-201ENST00000416717 ZDHHC9Q9Y397 364 aa12.69□□□□□ -0.38
SMPD4P1-201ENST00000416717 EZH2Q15910 746 aaKnown RBP12.69□□□□□ -0.38
SMPD4P1-201ENST00000416717 Q6ZUG5 572 aa12.69□□□□□ -0.38
SMPD4P1-201ENST00000416717 HIBADHP31937 336 aaKnown RBP12.68□□□□□ -0.38
SMPD4P1-201ENST00000416717 IMMTQ16891 758 aaKnown RBP12.68□□□□□ -0.38
SMPD4P1-201ENST00000416717 GBP4Q96PP9 640 aa12.68□□□□□ -0.38
SMPD4P1-201ENST00000416717 CTNNA3Q9UI47 895 aa12.68□□□□□ -0.38
SMPD4P1-201ENST00000416717 ANKRD31Q8N7Z5 1873 aa12.68□□□□□ -0.38
SMPD4P1-201ENST00000416717 CYP7A1P22680 504 aa12.68□□□□□ -0.38
SMPD4P1-201ENST00000416717 ST3GAL1Q11201 340 aa12.68□□□□□ -0.38
SMPD4P1-201ENST00000416717 FBXO33Q7Z6M2 555 aa12.68□□□□□ -0.38
SMPD4P1-201ENST00000416717 RBM17Q96I25 401 aaKnown RBP12.68□□□□□ -0.38
SMPD4P1-201ENST00000416717 ZSCAN31Q96LW9 406 aaPredicted RBP12.68□□□□□ -0.38
SMPD4P1-201ENST00000416717 STRBPQ96SI9 672 aaKnown RBP12.68□□□□□ -0.38
SMPD4P1-201ENST00000416717 NSFL1CQ9UNZ2 370 aaKnown RBP12.68□□□□□ -0.38
SMPD4P1-201ENST00000416717 PNPLA7Q6ZV29 1317 aa12.67□□□□□ -0.38
SMPD4P1-201ENST00000416717 ZNF213O14771 459 aa12.67□□□□□ -0.38
SMPD4P1-201ENST00000416717 PRKAB2O43741 272 aa12.67□□□□□ -0.38
SMPD4P1-201ENST00000416717 MMP10P09238 476 aa12.67□□□□□ -0.38
SMPD4P1-201ENST00000416717 FOXD4L6Q3SYB3 417 aaPredicted RBP12.67□□□□□ -0.38
SMPD4P1-201ENST00000416717 CRY2Q49AN0 593 aa12.67□□□□□ -0.38
SMPD4P1-201ENST00000416717 FOXD4L3Q6VB84 417 aaPredicted RBP12.67□□□□□ -0.38
SMPD4P1-201ENST00000416717 ADGRA1Q86SQ6 560 aa12.67□□□□□ -0.38
SMPD4P1-201ENST00000416717 NLGN1Q8N2Q7 840 aa12.67□□□□□ -0.38
SMPD4P1-201ENST00000416717 LCORLQ8N3X6 602 aa12.67□□□□□ -0.38
SMPD4P1-201ENST00000416717 BRF1Q92994 677 aa12.67□□□□□ -0.38
SMPD4P1-201ENST00000416717 DENND2AQ9ULE3 1009 aa12.67□□□□□ -0.38
SMPD4P1-201ENST00000416717 SMC3Q9UQE7 1217 aa12.67□□□□□ -0.38
SMPD4P1-201ENST00000416717 TCHHQ07283 1943 aa12.67□□□□□ -0.38
SMPD4P1-201ENST00000416717 CACNA1SQ13698 1873 aa12.67□□□□□ -0.38
SMPD4P1-201ENST00000416717 GPSM2P81274 684 aa12.67□□□□□ -0.38
SMPD4P1-201ENST00000416717 ANKRD1Q15327 319 aa12.67□□□□□ -0.38
SMPD4P1-201ENST00000416717 DHX32Q7L7V1 743 aaKnown RBP12.67□□□□□ -0.38
SMPD4P1-201ENST00000416717 IL27Q8NEV9 243 aa12.67□□□□□ -0.38
SMPD4P1-201ENST00000416717 SH2B1Q9NRF2 756 aaPredicted RBP12.67□□□□□ -0.38
SMPD4P1-201ENST00000416717 NAP1L2Q9ULW6 460 aaPredicted RBP12.67□□□□□ -0.38
SMPD4P1-201ENST00000416717 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.67□□□□□ -0.38
SMPD4P1-201ENST00000416717 CHD4Q14839 1912 aa12.67□□□□□ -0.38
SMPD4P1-201ENST00000416717 BAG4O95429 457 aaKnown RBP12.66□□□□□ -0.38
SMPD4P1-201ENST00000416717 STK11IPQ8N1F8 1099 aa12.66□□□□□ -0.38
SMPD4P1-201ENST00000416717 XDHP47989 1333 aa12.66□□□□□ -0.38
SMPD4P1-201ENST00000416717 GOLGB1Q14789 3259 aaKnown RBP12.66□□□□□ -0.38
SMPD4P1-201ENST00000416717 UFL1O94874 794 aa12.65□□□□□ -0.38
SMPD4P1-201ENST00000416717 GJB2P29033 226 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms