RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 RASGRF1Q13972 1273 aa22.67■■□□□ 1.22
CDC42-204ENST00000411827 SPTY2D1Q68D10 685 aaPredicted RBP22.67■■□□□ 1.22
CDC42-204ENST00000411827 PELP1Q8IZL8 1130 aaKnown RBP22.67■■□□□ 1.22
CDC42-204ENST00000411827 ZNF277Q9NRM2 450 aaPredicted RBP22.67■■□□□ 1.22
CDC42-204ENST00000411827 HMG20BQ9P0W2 317 aa22.67■■□□□ 1.22
CDC42-204ENST00000411827 WWC3Q9ULE0 1092 aa22.67■■□□□ 1.22
CDC42-204ENST00000411827 SUGT1Q9Y2Z0 365 aa22.67■■□□□ 1.22
CDC42-204ENST00000411827 SALL1Q9NSC2 1324 aa22.66■■□□□ 1.22
CDC42-204ENST00000411827 YBX3P16989 372 aaKnown RBP eCLIP22.66■■□□□ 1.222e-8■■□□□ 11.7
CDC42-204ENST00000411827 FKBP1AP62942 108 aaKnown RBP22.66■■□□□ 1.22
CDC42-204ENST00000411827 PAG1Q9NWQ8 432 aa22.66■■□□□ 1.22
CDC42-204ENST00000411827 ZNRF3Q9ULT6 936 aa22.66■■□□□ 1.22
CDC42-204ENST00000411827 ECE2O60344 883 aa22.65■■□□□ 1.22
CDC42-204ENST00000411827 STRIP1Q5VSL9 837 aa22.65■■□□□ 1.22
CDC42-204ENST00000411827 GPR101Q96P66 508 aaPredicted RBP22.65■■□□□ 1.22
CDC42-204ENST00000411827 EIF5BO60841 1220 aaKnown RBP22.64■■□□□ 1.21
CDC42-204ENST00000411827 MMP14P50281 582 aa22.64■■□□□ 1.21
CDC42-204ENST00000411827 ZSCAN25Q6NSZ9 544 aa22.64■■□□□ 1.21
CDC42-204ENST00000411827 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.64■■□□□ 1.21
CDC42-204ENST00000411827 RFX7Q2KHR2 1363 aa22.63■■□□□ 1.21
CDC42-204ENST00000411827 TRIM6-TRIM34B2RNG4 842 aa22.63■■□□□ 1.21
CDC42-204ENST00000411827 HIP1O00291 1037 aa22.63■■□□□ 1.21
CDC42-204ENST00000411827 DOK7Q18PE1 504 aa22.63■■□□□ 1.21
CDC42-204ENST00000411827 TSHZ3Q63HK5 1081 aa22.63■■□□□ 1.21
CDC42-204ENST00000411827 DNAJC2Q99543 621 aaKnown RBP22.63■■□□□ 1.21
CDC42-204ENST00000411827 MYO3BQ8WXR4 1341 aa22.62■■□□□ 1.21
CDC42-204ENST00000411827 ZC3H4Q9UPT8 1303 aaKnown RBP22.62■■□□□ 1.21
CDC42-204ENST00000411827 USP17L3A6NCW0 530 aa22.62■■□□□ 1.21
CDC42-204ENST00000411827 USP17L4A6NCW7 530 aa22.62■■□□□ 1.21
CDC42-204ENST00000411827 ZFYP08048 801 aaPredicted RBP22.62■■□□□ 1.21
CDC42-204ENST00000411827 ZAP70P43403 619 aa22.62■■□□□ 1.21
CDC42-204ENST00000411827 SCARF1Q14162 830 aa22.62■■□□□ 1.21
CDC42-204ENST00000411827 TTLL5Q6EMB2 1281 aa22.62■■□□□ 1.21
CDC42-204ENST00000411827 USP17L1Q7RTZ2 530 aa22.62■■□□□ 1.21
CDC42-204ENST00000411827 KBTBD3Q8NAB2 608 aa22.62■■□□□ 1.21
CDC42-204ENST00000411827 DBNDD1Q9H9R9 158 aa22.62■■□□□ 1.21
CDC42-204ENST00000411827 GOLIM4O00461 696 aa22.61■■□□□ 1.21
CDC42-204ENST00000411827 SDSP20132 328 aa22.61■■□□□ 1.21
CDC42-204ENST00000411827 MAP3K12Q12852 859 aa22.61■■□□□ 1.21
CDC42-204ENST00000411827 TNIP1Q15025 636 aa22.61■■□□□ 1.21
CDC42-204ENST00000411827 CYP2E1P05181 493 aaPredicted RBP22.6■■□□□ 1.21
CDC42-204ENST00000411827 GSPT1P15170 499 aaKnown RBP22.6■■□□□ 1.21
CDC42-204ENST00000411827 CASC1Q6TDU7 716 aa22.6■■□□□ 1.21
CDC42-204ENST00000411827 SNRKQ9NRH2 765 aa22.6■■□□□ 1.21
CDC42-204ENST00000411827 IQSEC3Q9UPP2 1182 aaPredicted RBP22.6■■□□□ 1.21
CDC42-204ENST00000411827 FZD9O00144 591 aa22.59■■□□□ 1.21
CDC42-204ENST00000411827 EIF6P56537 245 aaKnown RBP22.59■■□□□ 1.21
CDC42-204ENST00000411827 GTF2IP78347 998 aa22.59■■□□□ 1.21
CDC42-204ENST00000411827 RASSF7Q02833 373 aa22.59■■□□□ 1.21
CDC42-204ENST00000411827 CHAF1AQ13111 956 aaPredicted RBP22.59■■□□□ 1.21
CDC42-204ENST00000411827 SLF2Q8IX21 1173 aa22.59■■□□□ 1.21
CDC42-204ENST00000411827 RILPL2Q969X0 211 aa22.59■■□□□ 1.21
CDC42-204ENST00000411827 LRP2BPQ9P2M1 347 aa22.59■■□□□ 1.21
CDC42-204ENST00000411827 MAST3O60307 1309 aa22.58■■□□□ 1.21
CDC42-204ENST00000411827 ERICH6Q7L0X2 663 aa22.58■■□□□ 1.21
CDC42-204ENST00000411827 SKAP1Q86WV1 359 aa22.58■■□□□ 1.21
CDC42-204ENST00000411827 FSD1Q9BTV5 496 aa22.58■■□□□ 1.21
CDC42-204ENST00000411827 AKAP11Q9UKA4 1901 aa22.58■■□□□ 1.21
CDC42-204ENST00000411827 LDHBP07195 334 aaKnown RBP22.57■■□□□ 1.2
CDC42-204ENST00000411827 VIL1P09327 827 aaKnown RBP22.57■■□□□ 1.2
CDC42-204ENST00000411827 GSTO1P78417 241 aa22.57■■□□□ 1.2
CDC42-204ENST00000411827 MFSD14BQ5SR56 506 aa22.57■■□□□ 1.2
CDC42-204ENST00000411827 CIAPIN1Q6FI81 312 aa22.57■■□□□ 1.2
CDC42-204ENST00000411827 RPS12P25398 132 aaKnown RBP22.56■■□□□ 1.2
CDC42-204ENST00000411827 DACT2Q5SW24 774 aa22.56■■□□□ 1.2
CDC42-204ENST00000411827 PI16Q6UXB8 463 aa22.56■■□□□ 1.2
CDC42-204ENST00000411827 CERS3Q8IU89 383 aa22.56■■□□□ 1.2
CDC42-204ENST00000411827 AGBL3Q8NEM8 1001 aa22.56■■□□□ 1.2
CDC42-204ENST00000411827 MRIQ9BWK5 157 aa22.56■■□□□ 1.2
CDC42-204ENST00000411827 ABCF2Q9UG63 623 aa22.56■■□□□ 1.2
CDC42-204ENST00000411827 MYH13Q9UKX3 1938 aa22.55■■□□□ 1.2
CDC42-204ENST00000411827 COL1A1P02452 1464 aaPredicted RBP22.55■■□□□ 1.2
CDC42-204ENST00000411827 YDJCA8MPS7 323 aa22.55■■□□□ 1.2
CDC42-204ENST00000411827 CDC45O75419 566 aa22.55■■□□□ 1.2
CDC42-204ENST00000411827 IDH1O75874 414 aaKnown RBP22.55■■□□□ 1.2
CDC42-204ENST00000411827 LDHCP07864 332 aa22.55■■□□□ 1.2
CDC42-204ENST00000411827 HDLBPQ00341 1268 aaKnown RBP22.55■■□□□ 1.2
CDC42-204ENST00000411827 RUFY2Q8WXA3 655 aa22.55■■□□□ 1.2
CDC42-204ENST00000411827 CHD4Q14839 1912 aa22.55■■□□□ 1.2
CDC42-204ENST00000411827 CXCL9Q07325 125 aa22.54■■□□□ 1.2
CDC42-204ENST00000411827 UBE3CQ15386 1083 aa22.54■■□□□ 1.2
CDC42-204ENST00000411827 RSBN1LQ6PCB5 846 aaPredicted RBP22.54■■□□□ 1.2
CDC42-204ENST00000411827 ANTXR1Q9H6X2 564 aa22.54■■□□□ 1.2
CDC42-204ENST00000411827 PIH1D3Q9NQM4 214 aaKnown RBP22.54■■□□□ 1.2
CDC42-204ENST00000411827 RAI14Q9P0K7 980 aa22.54■■□□□ 1.2
CDC42-204ENST00000411827 RNF181Q9P0P0 153 aa22.54■■□□□ 1.2
CDC42-204ENST00000411827 C9orf131Q5VYM1 1079 aa22.53■■□□□ 1.2
CDC42-204ENST00000411827 DZIP1Q86YF9 867 aaKnown RBP22.53■■□□□ 1.2
CDC42-204ENST00000411827 FBXW7Q969H0 707 aa22.53■■□□□ 1.2
CDC42-204ENST00000411827 DIAPH3Q9NSV4 1193 aa22.53■■□□□ 1.2
CDC42-204ENST00000411827 RNF113AO15541 343 aaKnown RBP22.52■■□□□ 1.2
CDC42-204ENST00000411827 MAP4K4O95819 1239 aaPredicted RBP22.52■■□□□ 1.2
CDC42-204ENST00000411827 SLC9C2Q5TAH2 1124 aa22.52■■□□□ 1.2
CDC42-204ENST00000411827 TBC1D9Q6ZT07 1266 aa22.52■■□□□ 1.2
CDC42-204ENST00000411827 DICER1Q9UPY3 1922 aaKnown RBP22.52■■□□□ 1.2
CDC42-204ENST00000411827 RAD17O75943 681 aa22.51■■□□□ 1.19
CDC42-204ENST00000411827 PRELPP51888 382 aa22.51■■□□□ 1.19
CDC42-204ENST00000411827 MFAP1P55081 439 aaKnown RBP22.51■■□□□ 1.19
CDC42-204ENST00000411827 GPC2Q8N158 579 aa22.51■■□□□ 1.19
CDC42-204ENST00000411827 OGFOD1Q8N543 542 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms