RNA–Protein interactions for RNA: ENST00000409532.5

ITGA6-203, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 3,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-203ENST00000409532 NKX2-3Q8TAU0 364 aa13.13□□□□□ -0.31
ITGA6-203ENST00000409532 ZNF274Q96GC6 653 aaPredicted RBP13.13□□□□□ -0.31
ITGA6-203ENST00000409532 CCDC94Q9BW85 323 aaPredicted RBP13.13□□□□□ -0.31
ITGA6-203ENST00000409532 IDH1O75874 414 aaKnown RBP13.12□□□□□ -0.31
ITGA6-203ENST00000409532 GTF2F1P35269 517 aaKnown RBP eCLIP13.12□□□□□ -0.31
ITGA6-203ENST00000409532 HSPA2P54652 639 aa13.12□□□□□ -0.31
ITGA6-203ENST00000409532 METTL24Q5JXM2 366 aa13.12□□□□□ -0.31
ITGA6-203ENST00000409532 DNAJC10Q8IXB1 793 aa13.12□□□□□ -0.31
ITGA6-203ENST00000409532 PDCL2Q8N4E4 241 aa13.12□□□□□ -0.31
ITGA6-203ENST00000409532 MRPS27Q92552 414 aaKnown RBP13.12□□□□□ -0.31
ITGA6-203ENST00000409532 INCENPQ9NQS7 918 aa13.12□□□□□ -0.31
ITGA6-203ENST00000409532 ADAMTS7Q9UKP4 1686 aa13.12□□□□□ -0.31
ITGA6-203ENST00000409532 CAMTA1Q9Y6Y1 1673 aa13.12□□□□□ -0.31
ITGA6-203ENST00000409532 RFX7Q2KHR2 1363 aa13.12□□□□□ -0.31
ITGA6-203ENST00000409532 IFIT5Q13325 482 aaKnown RBP13.12□□□□□ -0.31
ITGA6-203ENST00000409532 ENGASEQ8NFI3 743 aa13.12□□□□□ -0.31
ITGA6-203ENST00000409532 HELBQ8NG08 1087 aaPredicted RBP13.12□□□□□ -0.31
ITGA6-203ENST00000409532 PKNOX2Q96KN3 472 aa13.12□□□□□ -0.31
ITGA6-203ENST00000409532 AGXT2Q9BYV1 514 aa13.12□□□□□ -0.31
ITGA6-203ENST00000409532 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.12□□□□□ -0.31
ITGA6-203ENST00000409532 ASAP1Q9ULH1 1129 aa13.12□□□□□ -0.31
ITGA6-203ENST00000409532 V9GYY5 206 aaPredicted RBP13.12□□□□□ -0.31
ITGA6-203ENST00000409532 MST1RQ04912 1400 aa13.12□□□□□ -0.31
ITGA6-203ENST00000409532 ZNF213O14771 459 aa13.12□□□□□ -0.31
ITGA6-203ENST00000409532 GPAA1O43292 621 aa13.12□□□□□ -0.31
ITGA6-203ENST00000409532 SKILP12757 684 aa13.12□□□□□ -0.31
ITGA6-203ENST00000409532 U2AF2P26368 475 aaKnown RBP eCLIP13.12□□□□□ -0.314e-7■■□□□ 11.9
ITGA6-203ENST00000409532 EVA1CP58658 441 aa13.12□□□□□ -0.31
ITGA6-203ENST00000409532 ATP2B3Q16720 1220 aa13.12□□□□□ -0.31
ITGA6-203ENST00000409532 LDHAL6AQ6ZMR3 332 aa13.12□□□□□ -0.31
ITGA6-203ENST00000409532 LRRC8AQ8IWT6 810 aa13.12□□□□□ -0.31
ITGA6-203ENST00000409532 DHX40Q8IX18 779 aaKnown RBP13.12□□□□□ -0.31
ITGA6-203ENST00000409532 GPR108Q9NPR9 543 aa13.12□□□□□ -0.31
ITGA6-203ENST00000409532 ANO10Q9NW15 660 aa13.12□□□□□ -0.31
ITGA6-203ENST00000409532 PCDH11XQ9BZA7 1347 aa13.11□□□□□ -0.31
ITGA6-203ENST00000409532 PCDH11YQ9BZA8 1340 aa13.11□□□□□ -0.31
ITGA6-203ENST00000409532 DPCR1Q3MIW9 517 aa13.11□□□□□ -0.31
ITGA6-203ENST00000409532 SYNE3Q6ZMZ3 975 aa13.11□□□□□ -0.31
ITGA6-203ENST00000409532 CEP57L1Q8IYX8 460 aa13.11□□□□□ -0.31
ITGA6-203ENST00000409532 SPATA31A3Q5VYP0 1347 aa13.11□□□□□ -0.31
ITGA6-203ENST00000409532 SALL1Q9NSC2 1324 aa13.11□□□□□ -0.31
ITGA6-203ENST00000409532 KIF28PB7ZC32 967 aa13.11□□□□□ -0.31
ITGA6-203ENST00000409532 CTAGE5O15320 804 aa13.11□□□□□ -0.31
ITGA6-203ENST00000409532 ANTXR2P58335 489 aa13.11□□□□□ -0.31
ITGA6-203ENST00000409532 TCIRG1Q13488 830 aa13.11□□□□□ -0.31
ITGA6-203ENST00000409532 MYL10Q9BUA6 226 aa13.11□□□□□ -0.31
ITGA6-203ENST00000409532 CCDC69A6NI79 296 aa13.1□□□□□ -0.31
ITGA6-203ENST00000409532 SNAP23O00161 211 aa13.1□□□□□ -0.31
ITGA6-203ENST00000409532 SMC2O95347 1197 aa13.1□□□□□ -0.31
ITGA6-203ENST00000409532 SLC9C2Q5TAH2 1124 aa13.1□□□□□ -0.31
ITGA6-203ENST00000409532 CNNM1Q9NRU3 951 aa13.1□□□□□ -0.31
ITGA6-203ENST00000409532 CTNNA3Q9UI47 895 aa13.1□□□□□ -0.31
ITGA6-203ENST00000409532 PTPN21Q16825 1174 aa13.1□□□□□ -0.31
ITGA6-203ENST00000409532 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.1□□□□□ -0.31
ITGA6-203ENST00000409532 CADPS2Q86UW7 1296 aa13.1□□□□□ -0.31
ITGA6-203ENST00000409532 LINC00301Q8NCQ3 95 aa13.1□□□□□ -0.31
ITGA6-203ENST00000409532 PHKBQ93100 1093 aa13.1□□□□□ -0.31
ITGA6-203ENST00000409532 SENP2Q9HC62 589 aa13.1□□□□□ -0.31
ITGA6-203ENST00000409532 NPHP1O15259 732 aa13.1□□□□□ -0.31
ITGA6-203ENST00000409532 SPTLC2O15270 562 aa13.1□□□□□ -0.31
ITGA6-203ENST00000409532 HLFQ16534 295 aa13.1□□□□□ -0.31
ITGA6-203ENST00000409532 MICU3Q86XE3 530 aa13.1□□□□□ -0.31
ITGA6-203ENST00000409532 FMR1NBQ8N0W7 255 aaPredicted RBP13.1□□□□□ -0.31
ITGA6-203ENST00000409532 NCOA7Q8NI08 942 aa13.1□□□□□ -0.31
ITGA6-203ENST00000409532 GREM2Q9H772 168 aa13.1□□□□□ -0.31
ITGA6-203ENST00000409532 HPS5Q9UPZ3 1129 aa13.1□□□□□ -0.31
ITGA6-203ENST00000409532 UBE2Q2LH0YL09 131 aa13.09□□□□□ -0.31
ITGA6-203ENST00000409532 IL2RBP14784 551 aa13.09□□□□□ -0.31
ITGA6-203ENST00000409532 MCAMP43121 646 aa13.09□□□□□ -0.31
ITGA6-203ENST00000409532 GNL2Q13823 731 aaKnown RBP13.09□□□□□ -0.31
ITGA6-203ENST00000409532 TMOD3Q9NYL9 352 aa13.09□□□□□ -0.31
ITGA6-203ENST00000409532 AKAP2Q9Y2D5 859 aa13.09□□□□□ -0.31
ITGA6-203ENST00000409532 MYSM1Q5VVJ2 828 aa13.09□□□□□ -0.31
ITGA6-203ENST00000409532 ADALQ6DHV7 355 aa13.09□□□□□ -0.31
ITGA6-203ENST00000409532 CCDC112Q8NEF3 446 aa13.09□□□□□ -0.31
ITGA6-203ENST00000409532 FBXO18Q8NFZ0 1043 aa13.09□□□□□ -0.31
ITGA6-203ENST00000409532 APPBP2Q92624 585 aa13.09□□□□□ -0.31
ITGA6-203ENST00000409532 ALS2Q96Q42 1657 aa13.09□□□□□ -0.31
ITGA6-203ENST00000409532 TNS3Q68CZ2 1445 aa13.09□□□□□ -0.31
ITGA6-203ENST00000409532 WDR17Q8IZU2 1322 aa13.09□□□□□ -0.31
ITGA6-203ENST00000409532 IGSF3O75054 1194 aa13.09□□□□□ -0.31
ITGA6-203ENST00000409532 CIAO1O76071 339 aa13.09□□□□□ -0.31
ITGA6-203ENST00000409532 TRDNQ13061 729 aa13.09□□□□□ -0.31
ITGA6-203ENST00000409532 KIF6Q6ZMV9 814 aa13.09□□□□□ -0.31
ITGA6-203ENST00000409532 CCDC82Q8N4S0 544 aa13.09□□□□□ -0.31
ITGA6-203ENST00000409532 B4E1Z4 1266 aa13.08□□□□□ -0.32
ITGA6-203ENST00000409532 ERVV-2B6SEH9 535 aa13.08□□□□□ -0.32
ITGA6-203ENST00000409532 ITGA6P23229 1130 aa13.08□□□□□ -0.32
ITGA6-203ENST00000409532 CEP135Q66GS9 1140 aa13.08□□□□□ -0.32
ITGA6-203ENST00000409532 MB21D2Q8IYB1 491 aaPredicted RBP13.08□□□□□ -0.32
ITGA6-203ENST00000409532 ISCA1Q9BUE6 129 aa13.08□□□□□ -0.32
ITGA6-203ENST00000409532 RTEL1Q9NZ71 1219 aa13.08□□□□□ -0.32
ITGA6-203ENST00000409532 LMOD1P29536 600 aaPredicted RBP13.08□□□□□ -0.32
ITGA6-203ENST00000409532 KLHL34Q8N239 644 aa13.08□□□□□ -0.32
ITGA6-203ENST00000409532 IFNKQ9P0W0 207 aa13.08□□□□□ -0.32
ITGA6-203ENST00000409532 ZNF202O95125 648 aa13.08□□□□□ -0.32
ITGA6-203ENST00000409532 CAVIN2O95810 425 aa13.08□□□□□ -0.32
ITGA6-203ENST00000409532 HSP90AA4PQ58FG1 418 aa13.08□□□□□ -0.32
ITGA6-203ENST00000409532 DHX16O60231 1041 aaKnown RBP13.07□□□□□ -0.32
ITGA6-203ENST00000409532 SLC3A2P08195 630 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms