RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 IFIT1BQ5T764 474 aaKnown RBP13.66□□□□□ -0.22
SHANK2-203ENST00000409161 HS2ST1Q7LGA3 356 aa13.66□□□□□ -0.22
SHANK2-203ENST00000409161 RPGRQ92834 1020 aaKnown RBP13.66□□□□□ -0.22
SHANK2-203ENST00000409161 TEX13AQ9BXU3 409 aaPredicted RBP13.66□□□□□ -0.22
SHANK2-203ENST00000409161 SDCCAG8Q86SQ7 713 aaPredicted RBP13.66□□□□□ -0.22
SHANK2-203ENST00000409161 TMOD3Q9NYL9 352 aa13.66□□□□□ -0.22
SHANK2-203ENST00000409161 USP48Q86UV5 1035 aa13.66□□□□□ -0.22
SHANK2-203ENST00000409161 IFT81Q8WYA0 676 aa13.66□□□□□ -0.22
SHANK2-203ENST00000409161 MRVI1Q9Y6F6 885 aa13.66□□□□□ -0.22
SHANK2-203ENST00000409161 VIMP08670 466 aaKnown RBP13.66□□□□□ -0.22
SHANK2-203ENST00000409161 ASIC1P78348 528 aa13.66□□□□□ -0.22
SHANK2-203ENST00000409161 DDX54Q8TDD1 881 aaKnown RBP13.66□□□□□ -0.22
SHANK2-203ENST00000409161 PRPF31Q8WWY3 499 aaKnown RBP13.66□□□□□ -0.22
SHANK2-203ENST00000409161 C6orf50Q9HD87 102 aa13.66□□□□□ -0.22
SHANK2-203ENST00000409161 TFIP11Q9UBB9 837 aaKnown RBP13.66□□□□□ -0.22
SHANK2-203ENST00000409161 TACC3Q9Y6A5 838 aa13.66□□□□□ -0.22
SHANK2-203ENST00000409161 RPGRIP1Q96KN7 1286 aa13.66□□□□□ -0.22
SHANK2-203ENST00000409161 C11orf95C9JLR9 678 aaPredicted RBP13.65□□□□□ -0.22
SHANK2-203ENST00000409161 SATB1Q01826 763 aa13.65□□□□□ -0.22
SHANK2-203ENST00000409161 TXNDC2Q86VQ3 553 aa13.65□□□□□ -0.22
SHANK2-203ENST00000409161 SH3BP5O60239 455 aa13.65□□□□□ -0.22
SHANK2-203ENST00000409161 PLCB3Q01970 1234 aa13.65□□□□□ -0.22
SHANK2-203ENST00000409161 Q9H521 79 aa13.65□□□□□ -0.22
SHANK2-203ENST00000409161 GUCA1BQ9UMX6 200 aa13.65□□□□□ -0.22
SHANK2-203ENST00000409161 AKR1B15C9JRZ8 316 aaPredicted RBP13.65□□□□□ -0.22
SHANK2-203ENST00000409161 PRDM11Q9NQV5 511 aa13.65□□□□□ -0.22
SHANK2-203ENST00000409161 RNF216Q9NWF9 866 aaPredicted RBP13.65□□□□□ -0.22
SHANK2-203ENST00000409161 PCF11O94913 1555 aaKnown RBP13.65□□□□□ -0.22
SHANK2-203ENST00000409161 GNAT2P19087 354 aa13.65□□□□□ -0.22
SHANK2-203ENST00000409161 RFC1P35251 1148 aaPredicted RBP13.65□□□□□ -0.22
SHANK2-203ENST00000409161 CHMP4BP1P59074 171 aa13.65□□□□□ -0.22
SHANK2-203ENST00000409161 SEPT14Q6ZU15 432 aa13.65□□□□□ -0.22
SHANK2-203ENST00000409161 SUDS3Q9H7L9 328 aaPredicted RBP13.65□□□□□ -0.22
SHANK2-203ENST00000409161 IQGAP2Q13576 1575 aa13.65□□□□□ -0.22
SHANK2-203ENST00000409161 GIPC1O14908 333 aa13.65□□□□□ -0.22
SHANK2-203ENST00000409161 RAB11FIP4Q86YS3 637 aa13.65□□□□□ -0.22
SHANK2-203ENST00000409161 TMX3Q96JJ7 454 aa13.65□□□□□ -0.22
SHANK2-203ENST00000409161 STK24Q9Y6E0 443 aa13.65□□□□□ -0.22
SHANK2-203ENST00000409161 UQCRFS1P1P0C7P4 283 aa13.65□□□□□ -0.22
SHANK2-203ENST00000409161 TRIM27P14373 513 aa13.65□□□□□ -0.22
SHANK2-203ENST00000409161 BAG1Q99933 345 aaPredicted RBP13.65□□□□□ -0.22
SHANK2-203ENST00000409161 FRMD4BQ9Y2L6 1034 aa13.65□□□□□ -0.22
SHANK2-203ENST00000409161 TROQ12816 1431 aaPredicted RBP13.65□□□□□ -0.22
SHANK2-203ENST00000409161 THEGQ9P2T0 379 aa13.65□□□□□ -0.23
SHANK2-203ENST00000409161 F13A1P00488 732 aa13.64□□□□□ -0.23
SHANK2-203ENST00000409161 CABP5Q9NP86 173 aa13.64□□□□□ -0.23
SHANK2-203ENST00000409161 TTC36A6NLP5 189 aa13.64□□□□□ -0.23
SHANK2-203ENST00000409161 NAPGQ99747 312 aaPredicted RBP13.64□□□□□ -0.23
SHANK2-203ENST00000409161 ALG1Q9BT22 464 aa13.64□□□□□ -0.23
SHANK2-203ENST00000409161 FAN1Q9Y2M0 1017 aa13.64□□□□□ -0.23
SHANK2-203ENST00000409161 TRIM75PA6NK02 468 aa13.64□□□□□ -0.23
SHANK2-203ENST00000409161 SPTLC2O15270 562 aa13.64□□□□□ -0.23
SHANK2-203ENST00000409161 PTGS1P23219 599 aa13.64□□□□□ -0.23
SHANK2-203ENST00000409161 ARHGAP45Q92619 1136 aa13.64□□□□□ -0.23
SHANK2-203ENST00000409161 ELP1O95163 1332 aa13.64□□□□□ -0.23
SHANK2-203ENST00000409161 DNAJC8O75937 253 aaPredicted RBP13.64□□□□□ -0.23
SHANK2-203ENST00000409161 XRCC6P12956 609 aaKnown RBP eCLIP13.64□□□□□ -0.23
SHANK2-203ENST00000409161 GDPD2Q9HCC8 539 aa13.64□□□□□ -0.23
SHANK2-203ENST00000409161 ZNF569Q5MCW4 686 aa13.64□□□□□ -0.23
SHANK2-203ENST00000409161 CAPZA3Q96KX2 299 aa13.64□□□□□ -0.23
SHANK2-203ENST00000409161 CNPY2Q9Y2B0 182 aa13.64□□□□□ -0.23
SHANK2-203ENST00000409161 PPP2R5EQ16537 467 aa13.64□□□□□ -0.23
SHANK2-203ENST00000409161 CYP26C1Q6V0L0 522 aa13.64□□□□□ -0.23
SHANK2-203ENST00000409161 SMARCA5O60264 1052 aaPredicted RBP13.64□□□□□ -0.23
SHANK2-203ENST00000409161 LGSNQ5TDP6 509 aa13.64□□□□□ -0.23
SHANK2-203ENST00000409161 C8orf74Q6P047 294 aa13.63□□□□□ -0.23
SHANK2-203ENST00000409161 ATP2A3Q93084 1043 aa13.63□□□□□ -0.23
SHANK2-203ENST00000409161 HAUS8Q9BT25 410 aa13.63□□□□□ -0.23
SHANK2-203ENST00000409161 ARAP1Q96P48 1450 aa13.63□□□□□ -0.23
SHANK2-203ENST00000409161 ERCC5P28715 1186 aaPredicted RBP13.63□□□□□ -0.23
SHANK2-203ENST00000409161 CCDC61Q9Y6R9 512 aa13.63□□□□□ -0.23
SHANK2-203ENST00000409161 SLC8A1P32418 973 aa13.63□□□□□ -0.23
SHANK2-203ENST00000409161 CCDC25Q86WR0 208 aa13.63□□□□□ -0.23
SHANK2-203ENST00000409161 FAM13AO94988 1023 aa13.63□□□□□ -0.23
SHANK2-203ENST00000409161 MAP2K2P36507 400 aa13.63□□□□□ -0.23
SHANK2-203ENST00000409161 SYNJ1O43426 1573 aa13.63□□□□□ -0.23
SHANK2-203ENST00000409161 CCDC122Q5T0U0 273 aa13.63□□□□□ -0.23
SHANK2-203ENST00000409161 GBP5Q96PP8 586 aa13.63□□□□□ -0.23
SHANK2-203ENST00000409161 NAP1L4Q99733 375 aaKnown RBP13.63□□□□□ -0.23
SHANK2-203ENST00000409161 MAP3K1Q13233 1512 aa13.63□□□□□ -0.23
SHANK2-203ENST00000409161 HSPA1LP34931 641 aa13.63□□□□□ -0.23
SHANK2-203ENST00000409161 CCDC170Q8IYT3 715 aa13.63□□□□□ -0.23
SHANK2-203ENST00000409161 GNA11P29992 359 aa13.63□□□□□ -0.23
SHANK2-203ENST00000409161 AFMP43652 599 aa13.63□□□□□ -0.23
SHANK2-203ENST00000409161 ITIH3Q06033 890 aa13.63□□□□□ -0.23
SHANK2-203ENST00000409161 PARP2Q9UGN5 583 aa13.63□□□□□ -0.23
SHANK2-203ENST00000409161 GOLGA6BA6NDN3 693 aa13.62□□□□□ -0.23
SHANK2-203ENST00000409161 PROSER2Q86WR7 435 aaPredicted RBP13.62□□□□□ -0.23
SHANK2-203ENST00000409161 ZNF354CQ86Y25 554 aa13.62□□□□□ -0.23
SHANK2-203ENST00000409161 NUP58Q9BVL2 599 aa13.62□□□□□ -0.23
SHANK2-203ENST00000409161 KRT2P35908 639 aa13.62□□□□□ -0.23
SHANK2-203ENST00000409161 SYCE1Q8N0S2 351 aa13.62□□□□□ -0.23
SHANK2-203ENST00000409161 TSPYL2Q9H2G4 693 aaPredicted RBP13.62□□□□□ -0.23
SHANK2-203ENST00000409161 KIF21AQ7Z4S6 1674 aa13.62□□□□□ -0.23
SHANK2-203ENST00000409161 EVCP57679 992 aa13.62□□□□□ -0.23
SHANK2-203ENST00000409161 ZNF644Q9H582 1327 aaPredicted RBP13.62□□□□□ -0.23
SHANK2-203ENST00000409161 GEN1Q17RS7 908 aa13.62□□□□□ -0.23
SHANK2-203ENST00000409161 MMRN2Q9H8L6 949 aa13.62□□□□□ -0.23
SHANK2-203ENST00000409161 TSPY3P0CV98 308 aa13.62□□□□□ -0.23
SHANK2-203ENST00000409161 TSPY8P0CW00 308 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms