RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 MAGEB6Q8N7X4 407 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 RBM17Q96I25 401 aaKnown RBP4.38□□□□□ -1.71
RGPD4-201ENST00000408999 METTL22Q9BUU2 404 aaPredicted RBP4.38□□□□□ -1.71
RGPD4-201ENST00000408999 USP26Q9BXU7 913 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 QRICH2Q9H0J4 1663 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 PLEKHG3A1L390 1219 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 IARSP41252 1262 aaKnown RBP4.38□□□□□ -1.71
RGPD4-201ENST00000408999 TMEM266Q2M3C6 531 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 Q6ZUG5 572 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 NECAB1Q8N987 351 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 ANKRD7Q92527 254 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 TMX3Q96JJ7 454 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 LRRC2Q9BYS8 371 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 SEPT11Q9NVA2 429 aaKnown RBP4.38□□□□□ -1.71
RGPD4-201ENST00000408999 AKAP11Q9UKA4 1901 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 MYH1P12882 1939 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 KLF18A0A0U1RQI7 1052 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 ZBTB7BO15156 539 aaPredicted RBP4.38□□□□□ -1.71
RGPD4-201ENST00000408999 WTAPQ15007 396 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 SLC9C2Q5TAH2 1124 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 NAA16Q6N069 864 aaPredicted RBP4.38□□□□□ -1.71
RGPD4-201ENST00000408999 PLEKHM2Q8IWE5 1019 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 ACBD3Q9H3P7 528 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 TFCP2L1Q9NZI6 479 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 ADGRB2O60241 1585 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 ROBO2Q9HCK4 1378 aa4.37□□□□□ -1.71
RGPD4-201ENST00000408999 ABCA9Q8IUA7 1624 aa4.37□□□□□ -1.71
RGPD4-201ENST00000408999 TEX35Q5T0J7 233 aa4.37□□□□□ -1.71
RGPD4-201ENST00000408999 IFIT1BQ5T764 474 aaKnown RBP4.37□□□□□ -1.71
RGPD4-201ENST00000408999 ZNF771Q7L3S4 317 aaPredicted RBP4.37□□□□□ -1.71
RGPD4-201ENST00000408999 TSG101Q99816 390 aa4.37□□□□□ -1.71
RGPD4-201ENST00000408999 CNNM2Q9H8M5 875 aa4.37□□□□□ -1.71
RGPD4-201ENST00000408999 VAT1LQ9HCJ6 419 aa4.37□□□□□ -1.71
RGPD4-201ENST00000408999 CSMD3Q7Z407 3707 aa4.37□□□□□ -1.71
RGPD4-201ENST00000408999 NIPBLQ6KC79 2804 aaeCLIP4.37□□□□□ -1.71
RGPD4-201ENST00000408999 RBAK-RBAKDNI3L0D1 243 aa4.37□□□□□ -1.71
RGPD4-201ENST00000408999 MYO1BO43795 1136 aa4.37□□□□□ -1.71
RGPD4-201ENST00000408999 GTF2F1P35269 517 aaKnown RBP eCLIP4.37□□□□□ -1.71
RGPD4-201ENST00000408999 TRAPPC3LQ5T215 181 aa4.37□□□□□ -1.71
RGPD4-201ENST00000408999 FSIP1Q8NA03 581 aa4.37□□□□□ -1.71
RGPD4-201ENST00000408999 HELBQ8NG08 1087 aaPredicted RBP4.37□□□□□ -1.71
RGPD4-201ENST00000408999 CCDC12Q8WUD4 166 aaPredicted RBP4.37□□□□□ -1.71
RGPD4-201ENST00000408999 BRF1Q92994 677 aa4.37□□□□□ -1.71
RGPD4-201ENST00000408999 ANKRD2Q9GZV1 360 aa4.37□□□□□ -1.71
RGPD4-201ENST00000408999 GDPD2Q9HCC8 539 aa4.37□□□□□ -1.71
RGPD4-201ENST00000408999 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.37□□□□□ -1.71
RGPD4-201ENST00000408999 DDX21Q9NR30 783 aaKnown RBP eCLIP4.37□□□□□ -1.71
RGPD4-201ENST00000408999 ANO10Q9NW15 660 aa4.37□□□□□ -1.71
RGPD4-201ENST00000408999 SLAIN2Q9P270 581 aa4.37□□□□□ -1.71
RGPD4-201ENST00000408999 CCNL1Q9UK58 526 aaPredicted RBP4.37□□□□□ -1.71
RGPD4-201ENST00000408999 CLTCQ00610 1675 aaKnown RBP4.37□□□□□ -1.71
RGPD4-201ENST00000408999 MADDQ8WXG6 1647 aa4.37□□□□□ -1.71
RGPD4-201ENST00000408999 LRRC10BA6NIK2 292 aa4.37□□□□□ -1.71
RGPD4-201ENST00000408999 CHL1O00533 1208 aa4.37□□□□□ -1.71
RGPD4-201ENST00000408999 ITGA6P23229 1130 aa4.37□□□□□ -1.71
RGPD4-201ENST00000408999 FAM98CQ17RN3 349 aaKnown RBP4.37□□□□□ -1.71
RGPD4-201ENST00000408999 TPTE2Q6XPS3 522 aa4.37□□□□□ -1.71
RGPD4-201ENST00000408999 TXLNBQ8N3L3 684 aa4.37□□□□□ -1.71
RGPD4-201ENST00000408999 MIGA1Q8NAN2 632 aa4.37□□□□□ -1.71
RGPD4-201ENST00000408999 CABP5Q9NP86 173 aa4.37□□□□□ -1.71
RGPD4-201ENST00000408999 ORC3Q9UBD5 711 aaPredicted RBP4.37□□□□□ -1.71
RGPD4-201ENST00000408999 MAP1AP78559 2803 aaPredicted RBP4.37□□□□□ -1.71
RGPD4-201ENST00000408999 SASH3O75995 380 aa4.37□□□□□ -1.71
RGPD4-201ENST00000408999 ZSCAN22P10073 491 aaPredicted RBP4.37□□□□□ -1.71
RGPD4-201ENST00000408999 CKAP2LQ8IYA6 745 aa4.37□□□□□ -1.71
RGPD4-201ENST00000408999 CNNM3Q8NE01 707 aa4.37□□□□□ -1.71
RGPD4-201ENST00000408999 KAT2BQ92831 832 aa4.37□□□□□ -1.71
RGPD4-201ENST00000408999 RBM27Q9P2N5 1060 aaKnown RBP4.37□□□□□ -1.71
RGPD4-201ENST00000408999 RTL9Q8NET4 1388 aa4.37□□□□□ -1.71
RGPD4-201ENST00000408999 CCDC171Q6TFL3 1326 aa4.37□□□□□ -1.71
RGPD4-201ENST00000408999 ADGRB3O60242 1522 aa4.37□□□□□ -1.71
RGPD4-201ENST00000408999 N4BP2Q86UW6 1770 aaPredicted RBP4.36□□□□□ -1.71
RGPD4-201ENST00000408999 RIMBP2O15034 1052 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 HOXB7P09629 217 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 GNAT2P19087 354 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 EIF5P55010 431 aaKnown RBP4.36□□□□□ -1.71
RGPD4-201ENST00000408999 ANAPC15P60006 121 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 CFAP100Q494V2 611 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 KLHL10Q6JEL2 608 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 TCEANC2Q96MN5 208 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 FEZ1Q99689 392 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 PDCL3Q9H2J4 239 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 MYO6Q9UM54 1294 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 JAG2Q9Y219 1238 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 KIF13AQ9H1H9 1805 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 RTL1A6NKG5 1358 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 KDRP35968 1356 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 TMEM94Q12767 1356 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 ZBTB43O43298 467 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 BAG4O95429 457 aaKnown RBP4.36□□□□□ -1.71
RGPD4-201ENST00000408999 RTN1Q16799 776 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 TNNI3KQ59H18 835 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 NOM1Q5C9Z4 860 aaKnown RBP4.36□□□□□ -1.71
RGPD4-201ENST00000408999 CREB3L3Q68CJ9 461 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 FAM177A1Q8N128 213 aaPredicted RBP4.36□□□□□ -1.71
RGPD4-201ENST00000408999 ESR2Q92731 530 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 SUCLG2Q96I99 432 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 RAB34Q9BZG1 259 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 UBA5Q9GZZ9 404 aa4.36□□□□□ -1.71
RGPD4-201ENST00000408999 CCDC87Q9NVE4 849 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 280.4 ms