RNA–Protein interactions for RNA: ENST00000407925.5

LTBP1-204, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP1, Length 5,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-204ENST00000407925 ERCC6LQ2NKX8 1250 aa12.11□□□□□ -0.47
LTBP1-204ENST00000407925 TPTE2Q6XPS3 522 aa12.11□□□□□ -0.47
LTBP1-204ENST00000407925 AOPEPQ8N6M6 819 aa12.11□□□□□ -0.47
LTBP1-204ENST00000407925 PPFIBP2Q8ND30 876 aa12.11□□□□□ -0.47
LTBP1-204ENST00000407925 ZSWIM4Q9H7M6 989 aa12.11□□□□□ -0.47
LTBP1-204ENST00000407925 MSH6P52701 1360 aa12.11□□□□□ -0.47
LTBP1-204ENST00000407925 DENND4BO75064 1496 aaPredicted RBP12.11□□□□□ -0.47
LTBP1-204ENST00000407925 SYNJ1O43426 1573 aa12.11□□□□□ -0.47
LTBP1-204ENST00000407925 SLC8A3P57103 927 aa12.11□□□□□ -0.47
LTBP1-204ENST00000407925 IDI1Q13907 227 aa12.11□□□□□ -0.47
LTBP1-204ENST00000407925 SEL1L2Q5TEA6 688 aa12.11□□□□□ -0.47
LTBP1-204ENST00000407925 NBPF11Q86T75 865 aa12.11□□□□□ -0.47
LTBP1-204ENST00000407925 TRIM7Q9C029 511 aa12.11□□□□□ -0.47
LTBP1-204ENST00000407925 ODF2LQ9ULJ1 636 aa12.11□□□□□ -0.47
LTBP1-204ENST00000407925 ZWINTO95229 277 aa12.11□□□□□ -0.47
LTBP1-204ENST00000407925 PAIP2Q9BPZ3 127 aaKnown RBP12.11□□□□□ -0.47
LTBP1-204ENST00000407925 ACEP12821 1306 aa12.11□□□□□ -0.47
LTBP1-204ENST00000407925 ADGRF5Q8IZF2 1346 aa12.11□□□□□ -0.47
LTBP1-204ENST00000407925 TNNI2P48788 182 aa12.11□□□□□ -0.47
LTBP1-204ENST00000407925 INF2Q27J81 1249 aa12.11□□□□□ -0.47
LTBP1-204ENST00000407925 USP48Q86UV5 1035 aa12.11□□□□□ -0.47
LTBP1-204ENST00000407925 XAGE3Q8WTP9 111 aa12.11□□□□□ -0.47
LTBP1-204ENST00000407925 PSMD1Q99460 953 aa12.11□□□□□ -0.47
LTBP1-204ENST00000407925 FAM184BQ9ULE4 1060 aa12.1□□□□□ -0.47
LTBP1-204ENST00000407925 GIGYF1O75420 1035 aaPredicted RBP12.1□□□□□ -0.47
LTBP1-204ENST00000407925 DHX32Q7L7V1 743 aaKnown RBP12.1□□□□□ -0.47
LTBP1-204ENST00000407925 ZC3H12CQ9C0D7 883 aaKnown RBP12.1□□□□□ -0.47
LTBP1-204ENST00000407925 LMBR1LQ6UX01 489 aa12.1□□□□□ -0.47
LTBP1-204ENST00000407925 CPLX4Q7Z7G2 160 aa12.1□□□□□ -0.47
LTBP1-204ENST00000407925 CCDC50Q8IVM0 306 aa12.1□□□□□ -0.47
LTBP1-204ENST00000407925 DHX58Q96C10 678 aa12.1□□□□□ -0.47
LTBP1-204ENST00000407925 IFT74Q96LB3 600 aa12.1□□□□□ -0.47
LTBP1-204ENST00000407925 NKIRAS1Q9NYS0 192 aa12.1□□□□□ -0.47
LTBP1-204ENST00000407925 SWAP70Q9UH65 585 aa12.1□□□□□ -0.47
LTBP1-204ENST00000407925 NUP160Q12769 1436 aa12.1□□□□□ -0.47
LTBP1-204ENST00000407925 MCM6Q14566 821 aa12.1□□□□□ -0.47
LTBP1-204ENST00000407925 CFAP157Q5JU67 520 aa12.1□□□□□ -0.47
LTBP1-204ENST00000407925 ISM2Q6H9L7 571 aa12.1□□□□□ -0.47
LTBP1-204ENST00000407925 NOS1P29475 1434 aa12.1□□□□□ -0.47
LTBP1-204ENST00000407925 UBXN1Q04323 297 aa12.09□□□□□ -0.47
LTBP1-204ENST00000407925 TYRO3Q06418 890 aa12.09□□□□□ -0.47
LTBP1-204ENST00000407925 SMC1BQ8NDV3 1235 aa12.09□□□□□ -0.47
LTBP1-204ENST00000407925 CCDC94Q9BW85 323 aaPredicted RBP12.09□□□□□ -0.47
LTBP1-204ENST00000407925 KCNG1Q9UIX4 513 aa12.09□□□□□ -0.47
LTBP1-204ENST00000407925 RPRD2Q5VT52 1461 aaKnown RBP12.09□□□□□ -0.47
LTBP1-204ENST00000407925 PPP2R5BQ15173 497 aa12.09□□□□□ -0.47
LTBP1-204ENST00000407925 RILPL1Q5EBL4 403 aa12.09□□□□□ -0.47
LTBP1-204ENST00000407925 COPS6Q7L5N1 327 aa12.09□□□□□ -0.47
LTBP1-204ENST00000407925 HAUS2Q9NVX0 235 aa12.09□□□□□ -0.47
LTBP1-204ENST00000407925 FRMD4BQ9Y2L6 1034 aa12.09□□□□□ -0.47
LTBP1-204ENST00000407925 PSMC4P43686 418 aa12.09□□□□□ -0.47
LTBP1-204ENST00000407925 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.09□□□□□ -0.47
LTBP1-204ENST00000407925 CNPY2Q9Y2B0 182 aa12.09□□□□□ -0.47
LTBP1-204ENST00000407925 ELP1O95163 1332 aa12.09□□□□□ -0.47
LTBP1-204ENST00000407925 PTPN23Q9H3S7 1636 aa12.09□□□□□ -0.47
LTBP1-204ENST00000407925 ACTN4O43707 911 aaKnown RBP12.09□□□□□ -0.47
LTBP1-204ENST00000407925 LACTBP83111 547 aaPredicted RBP12.09□□□□□ -0.47
LTBP1-204ENST00000407925 PPP1R7Q15435 360 aa12.09□□□□□ -0.47
LTBP1-204ENST00000407925 WDR44Q5JSH3 913 aa12.09□□□□□ -0.47
LTBP1-204ENST00000407925 NECAB1Q8N987 351 aa12.09□□□□□ -0.47
LTBP1-204ENST00000407925 RSPH14Q9UHP6 348 aa12.09□□□□□ -0.47
LTBP1-204ENST00000407925 STX10O60499 249 aa12.08□□□□□ -0.47
LTBP1-204ENST00000407925 CAPN2P17655 700 aa12.08□□□□□ -0.47
LTBP1-204ENST00000407925 TPD52P55327 224 aaPredicted RBP12.08□□□□□ -0.47
LTBP1-204ENST00000407925 AFAP1L2Q8N4X5 818 aa12.08□□□□□ -0.47
LTBP1-204ENST00000407925 IQCDQ96DY2 449 aa12.08□□□□□ -0.47
LTBP1-204ENST00000407925 MAK16Q9BXY0 300 aaKnown RBP12.08□□□□□ -0.47
LTBP1-204ENST00000407925 CHPF2Q9P2E5 772 aa12.08□□□□□ -0.47
LTBP1-204ENST00000407925 ZNF219Q9P2Y4 722 aaPredicted RBP12.08□□□□□ -0.47
LTBP1-204ENST00000407925 EPB41P11171 864 aaKnown RBP12.08□□□□□ -0.48
LTBP1-204ENST00000407925 SV2BQ7L1I2 683 aa12.08□□□□□ -0.48
LTBP1-204ENST00000407925 DNAJC25Q9H1X3 360 aa12.08□□□□□ -0.48
LTBP1-204ENST00000407925 HELLSQ9NRZ9 838 aa12.08□□□□□ -0.48
LTBP1-204ENST00000407925 EXOC7Q9UPT5 735 aa12.08□□□□□ -0.48
LTBP1-204ENST00000407925 CNGA1P29973 690 aa12.08□□□□□ -0.48
LTBP1-204ENST00000407925 MYL5Q02045 173 aa12.08□□□□□ -0.48
LTBP1-204ENST00000407925 SEPT6Q14141 434 aa12.08□□□□□ -0.48
LTBP1-204ENST00000407925 HAUS3Q68CZ6 603 aa12.08□□□□□ -0.48
LTBP1-204ENST00000407925 TRMT1LQ7Z2T5 733 aaKnown RBP12.08□□□□□ -0.48
LTBP1-204ENST00000407925 IPO4Q8TEX9 1081 aaKnown RBP12.08□□□□□ -0.48
LTBP1-204ENST00000407925 NOX5Q96PH1 765 aa12.08□□□□□ -0.48
LTBP1-204ENST00000407925 SELENOSQ9BQE4 189 aa12.08□□□□□ -0.48
LTBP1-204ENST00000407925 BABAM1Q9NWV8 329 aa12.08□□□□□ -0.48
LTBP1-204ENST00000407925 CDK13Q14004 1512 aaKnown RBP12.08□□□□□ -0.48
LTBP1-204ENST00000407925 TAF12Q16514 161 aa12.08□□□□□ -0.48
LTBP1-204ENST00000407925 BRDTQ58F21 947 aaPredicted RBP12.08□□□□□ -0.48
LTBP1-204ENST00000407925 HDXQ7Z353 690 aa12.08□□□□□ -0.48
LTBP1-204ENST00000407925 HOOK2Q96ED9 719 aa12.08□□□□□ -0.48
LTBP1-204ENST00000407925 SMTNP53814 917 aa12.07□□□□□ -0.48
LTBP1-204ENST00000407925 TMEM87BQ96K49 555 aa12.07□□□□□ -0.48
LTBP1-204ENST00000407925 MEIS3Q99687 375 aa12.07□□□□□ -0.48
LTBP1-204ENST00000407925 TMOD4Q9NZQ9 345 aa12.07□□□□□ -0.48
LTBP1-204ENST00000407925 CIB2O75838 187 aa12.07□□□□□ -0.48
LTBP1-204ENST00000407925 ERCC5P28715 1186 aaPredicted RBP12.07□□□□□ -0.48
LTBP1-204ENST00000407925 B4GALNT4Q76KP1 1039 aa12.07□□□□□ -0.48
LTBP1-204ENST00000407925 C10orf67Q8IYJ2 551 aa12.07□□□□□ -0.48
LTBP1-204ENST00000407925 FAM76AQ8TAV0 307 aa12.07□□□□□ -0.48
LTBP1-204ENST00000407925 JDP2Q8WYK2 163 aa12.07□□□□□ -0.48
LTBP1-204ENST00000407925 LARP6Q9BRS8 491 aaKnown RBP12.07□□□□□ -0.48
LTBP1-204ENST00000407925 NUP58Q9BVL2 599 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms