RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 A1BGP04217 495 aa4.54□□□□□ -1.68
RTN4-209ENST00000405240 APOBRQ0VD83 1088 aa4.54□□□□□ -1.68
RTN4-209ENST00000405240 SLFNL1Q499Z3 407 aa4.54□□□□□ -1.68
RTN4-209ENST00000405240 FERMT3Q86UX7 667 aa4.54□□□□□ -1.68
RTN4-209ENST00000405240 LUZP1Q86V48 1076 aa4.54□□□□□ -1.68
RTN4-209ENST00000405240 ELOA2Q8IYF1 753 aaPredicted RBP4.54□□□□□ -1.68
RTN4-209ENST00000405240 ZBTB38Q8NAP3 1195 aaPredicted RBP4.54□□□□□ -1.68
RTN4-209ENST00000405240 DNAJC2Q99543 621 aaKnown RBP4.54□□□□□ -1.68
RTN4-209ENST00000405240 PUS3Q9BZE2 481 aaKnown RBP4.54□□□□□ -1.68
RTN4-209ENST00000405240 POLR3EQ9NVU0 708 aa4.54□□□□□ -1.68
RTN4-209ENST00000405240 TFIP11Q9UBB9 837 aaKnown RBP4.54□□□□□ -1.68
RTN4-209ENST00000405240 AKAP2Q9Y2D5 859 aa4.54□□□□□ -1.68
RTN4-209ENST00000405240 COL24A1Q17RW2 1714 aa4.54□□□□□ -1.68
RTN4-209ENST00000405240 COL4A1P02462 1669 aa4.54□□□□□ -1.68
RTN4-209ENST00000405240 IL2RBP14784 551 aa4.54□□□□□ -1.68
RTN4-209ENST00000405240 ARID4AP29374 1257 aaPredicted RBP4.54□□□□□ -1.68
RTN4-209ENST00000405240 ADALQ6DHV7 355 aa4.54□□□□□ -1.68
RTN4-209ENST00000405240 TEX13AQ9BXU3 409 aaPredicted RBP4.54□□□□□ -1.68
RTN4-209ENST00000405240 MORC2Q9Y6X9 1032 aaPredicted RBP4.54□□□□□ -1.68
RTN4-209ENST00000405240 MAP3K15Q6ZN16 1313 aa4.53□□□□□ -1.68
RTN4-209ENST00000405240 GOLGA6L6A8MZA4 724 aa4.53□□□□□ -1.68
RTN4-209ENST00000405240 IFIT1P09914 478 aaKnown RBP4.53□□□□□ -1.68
RTN4-209ENST00000405240 FAM160A1Q05DH4 1040 aa4.53□□□□□ -1.68
RTN4-209ENST00000405240 STK3Q13188 491 aa4.53□□□□□ -1.68
RTN4-209ENST00000405240 ALX1Q15699 326 aa4.53□□□□□ -1.68
RTN4-209ENST00000405240 ZSCAN25Q6NSZ9 544 aa4.53□□□□□ -1.68
RTN4-209ENST00000405240 XAGE2Q96GT9 111 aa4.53□□□□□ -1.68
RTN4-209ENST00000405240 ZNF594Q96JF6 807 aaPredicted RBP4.53□□□□□ -1.68
RTN4-209ENST00000405240 USP28Q96RU2 1077 aa4.53□□□□□ -1.68
RTN4-209ENST00000405240 CTNNA3Q9UI47 895 aa4.53□□□□□ -1.68
RTN4-209ENST00000405240 MYH14Q7Z406 1995 aaKnown RBP4.53□□□□□ -1.68
RTN4-209ENST00000405240 YEATS4O95619 227 aa4.53□□□□□ -1.68
RTN4-209ENST00000405240 FGFR2P21802 821 aa4.53□□□□□ -1.68
RTN4-209ENST00000405240 CAMK4Q16566 473 aa4.53□□□□□ -1.68
RTN4-209ENST00000405240 LMOD2Q6P5Q4 547 aa4.53□□□□□ -1.68
RTN4-209ENST00000405240 C11orf57Q6ZUT1 292 aaPredicted RBP4.53□□□□□ -1.68
RTN4-209ENST00000405240 LINC00301Q8NCQ3 95 aa4.53□□□□□ -1.68
RTN4-209ENST00000405240 APPBP2Q92624 585 aa4.53□□□□□ -1.68
RTN4-209ENST00000405240 AK7Q96M32 723 aa4.53□□□□□ -1.68
RTN4-209ENST00000405240 ZNF396Q96N95 335 aaPredicted RBP4.53□□□□□ -1.68
RTN4-209ENST00000405240 RTL9Q8NET4 1388 aa4.53□□□□□ -1.68
RTN4-209ENST00000405240 MYH13Q9UKX3 1938 aa4.53□□□□□ -1.68
RTN4-209ENST00000405240 FGAP02671 866 aa4.53□□□□□ -1.68
RTN4-209ENST00000405240 PTMAP06454 111 aaKnown RBP4.53□□□□□ -1.68
RTN4-209ENST00000405240 ADORA1P30542 326 aa4.53□□□□□ -1.68
RTN4-209ENST00000405240 ADD2P35612 726 aa4.53□□□□□ -1.68
RTN4-209ENST00000405240 KCNJ6P48051 423 aa4.53□□□□□ -1.68
RTN4-209ENST00000405240 SCARF1Q14162 830 aa4.53□□□□□ -1.68
RTN4-209ENST00000405240 STX1AQ16623 288 aa4.53□□□□□ -1.68
RTN4-209ENST00000405240 CCDC144BQ3MJ40 725 aa4.53□□□□□ -1.68
RTN4-209ENST00000405240 AXDND1Q5T1B0 1012 aaPredicted RBP4.53□□□□□ -1.68
RTN4-209ENST00000405240 GIGYF2Q6Y7W6 1299 aaKnown RBP4.53□□□□□ -1.68
RTN4-209ENST00000405240 NYAP1Q6ZVC0 841 aa4.53□□□□□ -1.68
RTN4-209ENST00000405240 CCAR1Q8IX12 1150 aaKnown RBP4.53□□□□□ -1.68
RTN4-209ENST00000405240 CCDC144CPQ8IYA2 1237 aa4.53□□□□□ -1.68
RTN4-209ENST00000405240 C17orf53Q8N3J3 647 aaPredicted RBP4.53□□□□□ -1.68
RTN4-209ENST00000405240 DDX11Q96FC9 970 aa4.53□□□□□ -1.68
RTN4-209ENST00000405240 PCDHA7Q9UN72 937 aa4.53□□□□□ -1.68
RTN4-209ENST00000405240 HPSEQ9Y251 543 aa4.53□□□□□ -1.68
RTN4-209ENST00000405240 SBF2Q86WG5 1849 aa4.52□□□□□ -1.69
RTN4-209ENST00000405240 NEMFO60524 1076 aa4.52□□□□□ -1.69
RTN4-209ENST00000405240 PTGS1P23219 599 aa4.52□□□□□ -1.69
RTN4-209ENST00000405240 ZNF165P49910 485 aa4.52□□□□□ -1.69
RTN4-209ENST00000405240 UBE3CQ15386 1083 aa4.52□□□□□ -1.69
RTN4-209ENST00000405240 LRRFIP1Q32MZ4 808 aaKnown RBP4.52□□□□□ -1.69
RTN4-209ENST00000405240 BRAPQ7Z569 592 aa4.52□□□□□ -1.69
RTN4-209ENST00000405240 NBPF11Q86T75 865 aa4.52□□□□□ -1.69
RTN4-209ENST00000405240 CKAP2LQ8IYA6 745 aa4.52□□□□□ -1.69
RTN4-209ENST00000405240 FBXO18Q8NFZ0 1043 aa4.52□□□□□ -1.69
RTN4-209ENST00000405240 TTLL11Q8NHH1 800 aa4.52□□□□□ -1.69
RTN4-209ENST00000405240 NKX2-3Q8TAU0 364 aa4.52□□□□□ -1.69
RTN4-209ENST00000405240 TIGD1Q96MW7 591 aa4.52□□□□□ -1.69
RTN4-209ENST00000405240 PUS7LQ9H0K6 701 aaKnown RBP4.52□□□□□ -1.69
RTN4-209ENST00000405240 OSBPL5Q9H0X9 879 aaPredicted RBP4.52□□□□□ -1.69
RTN4-209ENST00000405240 KIF3AQ9Y496 699 aa4.52□□□□□ -1.69
RTN4-209ENST00000405240 ERVV-1B6SEH8 477 aa4.52□□□□□ -1.69
RTN4-209ENST00000405240 CSB-PGBD3P0DP91 1061 aa4.52□□□□□ -1.69
RTN4-209ENST00000405240 TRHP20396 242 aaPredicted RBP4.52□□□□□ -1.69
RTN4-209ENST00000405240 MCAMP43121 646 aa4.52□□□□□ -1.69
RTN4-209ENST00000405240 NTRK3Q16288 839 aa4.52□□□□□ -1.69
RTN4-209ENST00000405240 TTLL5Q6EMB2 1281 aa4.52□□□□□ -1.69
RTN4-209ENST00000405240 LRRC8AQ8IWT6 810 aa4.52□□□□□ -1.69
RTN4-209ENST00000405240 SLC4A9Q96Q91 983 aa4.52□□□□□ -1.69
RTN4-209ENST00000405240 MAP3K14Q99558 947 aa4.52□□□□□ -1.69
RTN4-209ENST00000405240 LRRC2Q9BYS8 371 aa4.52□□□□□ -1.69
RTN4-209ENST00000405240 DNAJC25Q9H1X3 360 aa4.52□□□□□ -1.69
RTN4-209ENST00000405240 HSD3B7Q9H2F3 369 aa4.52□□□□□ -1.69
RTN4-209ENST00000405240 NRBP1Q9UHY1 535 aa4.52□□□□□ -1.69
RTN4-209ENST00000405240 STK36Q9NRP7 1315 aa4.52□□□□□ -1.69
RTN4-209ENST00000405240 CCZ1BP86790 482 aa4.52□□□□□ -1.69
RTN4-209ENST00000405240 CCZ1P86791 482 aaPredicted RBP4.52□□□□□ -1.69
RTN4-209ENST00000405240 PTPAQ15257 358 aa4.52□□□□□ -1.69
RTN4-209ENST00000405240 SGMS1Q86VZ5 419 aa4.52□□□□□ -1.69
RTN4-209ENST00000405240 NLRP10Q86W26 655 aa4.52□□□□□ -1.69
RTN4-209ENST00000405240 ZNF34Q8IZ26 560 aa4.52□□□□□ -1.69
RTN4-209ENST00000405240 CACTINQ8WUQ7 758 aaKnown RBP4.52□□□□□ -1.69
RTN4-209ENST00000405240 PIGBQ92521 554 aa4.52□□□□□ -1.69
RTN4-209ENST00000405240 MTA3Q9BTC8 594 aa4.52□□□□□ -1.69
RTN4-209ENST00000405240 FTOQ9C0B1 505 aaKnown RBP eCLIP4.52□□□□□ -1.69
RTN4-209ENST00000405240 CEP126Q9P2H0 1117 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms