RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 XPO4Q9C0E2 1151 aaKnown RBP13.97□□□□□ -0.17
RBM39-206ENST00000403542 ELF2Q15723 593 aa13.96□□□□□ -0.17
RBM39-206ENST00000403542 ZBTB9Q96C00 473 aa13.96□□□□□ -0.17
RBM39-206ENST00000403542 DCAF5Q96JK2 942 aa13.96□□□□□ -0.17
RBM39-206ENST00000403542 SH3TC1Q8TE82 1336 aa13.96□□□□□ -0.17
RBM39-206ENST00000403542 EYA2O00167 538 aa13.96□□□□□ -0.18
RBM39-206ENST00000403542 ZAP70P43403 619 aa13.96□□□□□ -0.18
RBM39-206ENST00000403542 CCZ1BP86790 482 aa13.96□□□□□ -0.18
RBM39-206ENST00000403542 CCZ1P86791 482 aaPredicted RBP13.96□□□□□ -0.18
RBM39-206ENST00000403542 FMR1NBQ8N0W7 255 aaPredicted RBP13.96□□□□□ -0.18
RBM39-206ENST00000403542 LLPHQ9BRT6 129 aaKnown RBP13.96□□□□□ -0.18
RBM39-206ENST00000403542 MYL10Q9BUA6 226 aa13.96□□□□□ -0.18
RBM39-206ENST00000403542 TMX1Q9H3N1 280 aa13.96□□□□□ -0.18
RBM39-206ENST00000403542 HELLSQ9NRZ9 838 aa13.96□□□□□ -0.18
RBM39-206ENST00000403542 CEP126Q9P2H0 1117 aa13.96□□□□□ -0.18
RBM39-206ENST00000403542 ATP1A3P13637 1013 aa13.95□□□□□ -0.18
RBM39-206ENST00000403542 LRRN4CLQ8ND94 238 aa13.95□□□□□ -0.18
RBM39-206ENST00000403542 PHKBQ93100 1093 aa13.95□□□□□ -0.18
RBM39-206ENST00000403542 DSCC1Q9BVC3 393 aa13.95□□□□□ -0.18
RBM39-206ENST00000403542 IL15P40933 162 aaPredicted RBP13.95□□□□□ -0.18
RBM39-206ENST00000403542 SPECC1Q5M775 1068 aa13.95□□□□□ -0.18
RBM39-206ENST00000403542 NBPF11Q86T75 865 aa13.95□□□□□ -0.18
RBM39-206ENST00000403542 FAM177A1Q8N128 213 aaPredicted RBP13.95□□□□□ -0.18
RBM39-206ENST00000403542 CCDC82Q8N4S0 544 aa13.95□□□□□ -0.18
RBM39-206ENST00000403542 PALLDQ8WX93 1383 aa13.94□□□□□ -0.18
RBM39-206ENST00000403542 RGPD5Q99666 1765 aa13.94□□□□□ -0.18
RBM39-206ENST00000403542 H7C1W4 665 aa13.94□□□□□ -0.18
RBM39-206ENST00000403542 GPTP24298 496 aa13.94□□□□□ -0.18
RBM39-206ENST00000403542 SYNE3Q6ZMZ3 975 aa13.94□□□□□ -0.18
RBM39-206ENST00000403542 LINC00301Q8NCQ3 95 aa13.94□□□□□ -0.18
RBM39-206ENST00000403542 XAGE2Q96GT9 111 aa13.94□□□□□ -0.18
RBM39-206ENST00000403542 MRFAP1L1Q96HT8 127 aa13.94□□□□□ -0.18
RBM39-206ENST00000403542 SENP2Q9HC62 589 aa13.94□□□□□ -0.18
RBM39-206ENST00000403542 C5P01031 1676 aa13.94□□□□□ -0.18
RBM39-206ENST00000403542 SPTLC2O15270 562 aa13.94□□□□□ -0.18
RBM39-206ENST00000403542 CTAGE5O15320 804 aa13.94□□□□□ -0.18
RBM39-206ENST00000403542 FOXP2O15409 715 aa13.94□□□□□ -0.18
RBM39-206ENST00000403542 CCDC57Q2TAC2 916 aa13.94□□□□□ -0.18
RBM39-206ENST00000403542 RALYLQ86SE5 291 aaKnown RBP13.94□□□□□ -0.18
RBM39-206ENST00000403542 SLC3A2P08195 630 aaKnown RBP13.93□□□□□ -0.18
RBM39-206ENST00000403542 GNL2Q13823 731 aaKnown RBP13.93□□□□□ -0.18
RBM39-206ENST00000403542 IMMTQ16891 758 aaKnown RBP13.93□□□□□ -0.18
RBM39-206ENST00000403542 SYT10Q6XYQ8 523 aa13.93□□□□□ -0.18
RBM39-206ENST00000403542 MICU3Q86XE3 530 aa13.93□□□□□ -0.18
RBM39-206ENST00000403542 ST7Q9NRC1 585 aa13.93□□□□□ -0.18
RBM39-206ENST00000403542 KIAA1468Q9P260 1216 aa13.93□□□□□ -0.18
RBM39-206ENST00000403542 PAXBP1Q9Y5B6 917 aa13.93□□□□□ -0.18
RBM39-206ENST00000403542 ZNF202O95125 648 aa13.93□□□□□ -0.18
RBM39-206ENST00000403542 CCAR2Q8N163 923 aaKnown RBP13.93□□□□□ -0.18
RBM39-206ENST00000403542 CLIC6Q96NY7 704 aa13.93□□□□□ -0.18
RBM39-206ENST00000403542 CTNNA3Q9UI47 895 aa13.93□□□□□ -0.18
RBM39-206ENST00000403542 SALL1Q9NSC2 1324 aa13.93□□□□□ -0.18
RBM39-206ENST00000403542 FER1L4A9Z1Z3 1794 aa13.93□□□□□ -0.18
RBM39-206ENST00000403542 CCDC158Q5M9N0 1113 aa13.93□□□□□ -0.18
RBM39-206ENST00000403542 ZNF771Q7L3S4 317 aaPredicted RBP13.93□□□□□ -0.18
RBM39-206ENST00000403542 NAT10Q9H0A0 1025 aaKnown RBP13.93□□□□□ -0.18
RBM39-206ENST00000403542 WDHD1O75717 1129 aaPredicted RBP13.92□□□□□ -0.18
RBM39-206ENST00000403542 IDH1O75874 414 aaKnown RBP13.92□□□□□ -0.18
RBM39-206ENST00000403542 ANTXR2P58335 489 aa13.92□□□□□ -0.18
RBM39-206ENST00000403542 KMT5BQ4FZB7 885 aa13.92□□□□□ -0.18
RBM39-206ENST00000403542 MYSM1Q5VVJ2 828 aa13.92□□□□□ -0.18
RBM39-206ENST00000403542 ADALQ6DHV7 355 aa13.92□□□□□ -0.18
RBM39-206ENST00000403542 ARMCX5Q6P1M9 558 aa13.92□□□□□ -0.18
RBM39-206ENST00000403542 SARM1Q6SZW1 724 aa13.92□□□□□ -0.18
RBM39-206ENST00000403542 HPS5Q9UPZ3 1129 aa13.92□□□□□ -0.18
RBM39-206ENST00000403542 SNAP23O00161 211 aa13.92□□□□□ -0.18
RBM39-206ENST00000403542 PFKFB1P16118 471 aa13.92□□□□□ -0.18
RBM39-206ENST00000403542 ATP2B1P20020 1258 aa13.92□□□□□ -0.18
RBM39-206ENST00000403542 TOM1L2Q6ZVM7 507 aa13.92□□□□□ -0.18
RBM39-206ENST00000403542 HOMER1Q86YM7 354 aa13.92□□□□□ -0.18
RBM39-206ENST00000403542 FBXO18Q8NFZ0 1043 aa13.92□□□□□ -0.18
RBM39-206ENST00000403542 ZNF274Q96GC6 653 aaPredicted RBP13.92□□□□□ -0.18
RBM39-206ENST00000403542 ZNF213O14771 459 aa13.91□□□□□ -0.18
RBM39-206ENST00000403542 GPAA1O43292 621 aa13.91□□□□□ -0.18
RBM39-206ENST00000403542 HELBQ8NG08 1087 aaPredicted RBP13.91□□□□□ -0.18
RBM39-206ENST00000403542 STRN4Q9NRL3 753 aa13.91□□□□□ -0.18
RBM39-206ENST00000403542 RTEL1Q9NZ71 1219 aa13.91□□□□□ -0.18
RBM39-206ENST00000403542 MROH7-TTC4A0A0A0MT08 1334 aa13.91□□□□□ -0.18
RBM39-206ENST00000403542 KAT6BQ8WYB5 2073 aa13.91□□□□□ -0.18
RBM39-206ENST00000403542 ATF3P18847 181 aa13.91□□□□□ -0.18
RBM39-206ENST00000403542 CDC25BP30305 580 aa13.91□□□□□ -0.18
RBM39-206ENST00000403542 PNOCQ13519 176 aa13.91□□□□□ -0.18
RBM39-206ENST00000403542 ERCC6LQ2NKX8 1250 aa13.91□□□□□ -0.18
RBM39-206ENST00000403542 E4F1Q66K89 784 aaPredicted RBP13.91□□□□□ -0.18
RBM39-206ENST00000403542 CHD2O14647 1828 aaKnown RBP13.91□□□□□ -0.18
RBM39-206ENST00000403542 CAVIN2O95810 425 aa13.9□□□□□ -0.18
RBM39-206ENST00000403542 SFPQP23246 707 aaKnown RBP eCLIP13.9□□□□□ -0.18
RBM39-206ENST00000403542 FBXO38Q6PIJ6 1188 aa13.9□□□□□ -0.18
RBM39-206ENST00000403542 NYAP1Q6ZVC0 841 aa13.9□□□□□ -0.18
RBM39-206ENST00000403542 CMTR1Q8N1G2 835 aaKnown RBP13.9□□□□□ -0.18
RBM39-206ENST00000403542 KIF18AQ8NI77 898 aa13.9□□□□□ -0.18
RBM39-206ENST00000403542 DPF2Q92785 391 aa13.9□□□□□ -0.18
RBM39-206ENST00000403542 AGXT2Q9BYV1 514 aa13.9□□□□□ -0.18
RBM39-206ENST00000403542 RBM6P78332 1123 aaKnown RBP13.9□□□□□ -0.18
RBM39-206ENST00000403542 B4E1Z4 1266 aa13.89□□□□□ -0.19
RBM39-206ENST00000403542 SLC9C2Q5TAH2 1124 aa13.89□□□□□ -0.19
RBM39-206ENST00000403542 ANO1Q5XXA6 986 aa13.89□□□□□ -0.19
RBM39-206ENST00000403542 A0A0G2JS52 829 aa13.89□□□□□ -0.19
RBM39-206ENST00000403542 SERPINC1P01008 464 aa13.89□□□□□ -0.19
RBM39-206ENST00000403542 METTL24Q5JXM2 366 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms